EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000021140 (Gene tree)
Gene ID: 103467852
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8649 bases
Position: chrLG7:14322929-14331577
Accession: 103467852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031207	zf-C2H2	PF00096.26	3.3e-32	1	6
ENSPREP00000031207	zf-C2H2	PF00096.26	3.3e-32	2	6
ENSPREP00000031207	zf-C2H2	PF00096.26	3.3e-32	3	6
ENSPREP00000031207	zf-C2H2	PF00096.26	3.3e-32	4	6
ENSPREP00000031207	zf-C2H2	PF00096.26	3.3e-32	5	6
ENSPREP00000031207	zf-C2H2	PF00096.26	3.3e-32	6	6
ENSPREP00000031207	zf-met	PF12874.7	6e-14	1	2
ENSPREP00000031207	zf-met	PF12874.7	6e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031565	-	6549	XM_008414564	ENSPREP00000031207	1082 (aa)	XP_008412786	UPI0004A31273

Gene Model

Click here to download ENSPREG00000021140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021140's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000021140	sall4	62	52.941	ENSPREG00000019161	-	93	47.458
ENSPREG00000021140	sall4	56	46.000	ENSPREG00000015081	-	80	46.000
ENSPREG00000021140	sall4	58	47.541	ENSPREG00000003614	-	80	51.020
ENSPREG00000021140	sall4	56	44.068	ENSPREG00000014127	-	74	48.980
ENSPREG00000021140	sall4	95	65.385	ENSPREG00000006802	sall1a	91	65.385
ENSPREG00000021140	sall4	87	63.462	ENSPREG00000014420	sall3a	78	63.462
ENSPREG00000021140	sall4	59	48.387	ENSPREG00000014800	-	85	55.102
ENSPREG00000021140	sall4	59	53.061	ENSPREG00000000153	-	92	53.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021140	sall4	100	44.252	ENSG00000101115	SALL4	86	67.308	Homo_sapiens
ENSPREG00000021140	sall4	100	78.768	ENSAPOG00000002465	sall4	100	78.768	Acanthochromis_polyacanthus
ENSPREG00000021140	sall4	100	44.483	ENSAMEG00000013250	-	99	46.154	Ailuropoda_melanoleuca
ENSPREG00000021140	sall4	100	75.989	ENSACIG00000017298	sall4	100	75.989	Amphilophus_citrinellus
ENSPREG00000021140	sall4	100	79.412	ENSAOCG00000023678	sall4	100	79.504	Amphiprion_ocellaris
ENSPREG00000021140	sall4	100	79.504	ENSAPEG00000000751	sall4	100	79.596	Amphiprion_percula
ENSPREG00000021140	sall4	100	77.961	ENSATEG00000024480	sall4	100	77.961	Anabas_testudineus
ENSPREG00000021140	sall4	100	51.933	ENSAPLG00000006498	SALL4	100	52.285	Anas_platyrhynchos
ENSPREG00000021140	sall4	100	51.607	ENSACAG00000012748	SALL4	100	51.820	Anolis_carolinensis
ENSPREG00000021140	sall4	100	43.900	ENSANAG00000023352	SALL4	100	44.072	Aotus_nancymaae
ENSPREG00000021140	sall4	100	76.838	ENSACLG00000017851	sall4	100	76.838	Astatotilapia_calliptera
ENSPREG00000021140	sall4	99	64.542	ENSAMXG00000001254	sall4	99	65.331	Astyanax_mexicanus
ENSPREG00000021140	sall4	100	43.290	ENSBTAG00000003101	SALL4	100	43.886	Bos_taurus
ENSPREG00000021140	sall4	81	45.445	ENSCJAG00000000591	SALL4	97	45.445	Callithrix_jacchus
ENSPREG00000021140	sall4	100	44.378	ENSCAFG00000011738	-	100	44.206	Canis_familiaris
ENSPREG00000021140	sall4	100	44.810	ENSCAFG00020021870	SALL4	100	44.637	Canis_lupus_dingo
ENSPREG00000021140	sall4	100	43.227	ENSCHIG00000026270	SALL4	100	43.669	Capra_hircus
ENSPREG00000021140	sall4	100	43.707	ENSTSYG00000007359	SALL4	100	51.639	Carlito_syrichta
ENSPREG00000021140	sall4	98	44.120	ENSCAPG00000012135	SALL4	97	44.353	Cavia_aperea
ENSPREG00000021140	sall4	100	39.913	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSPREG00000021140	sall4	100	44.118	ENSCATG00000030757	SALL4	100	44.473	Cercocebus_atys
ENSPREG00000021140	sall4	100	43.712	ENSCLAG00000010479	SALL4	100	44.356	Chinchilla_lanigera
ENSPREG00000021140	sall4	100	43.707	ENSCSAG00000015269	SALL4	100	44.425	Chlorocebus_sabaeus
ENSPREG00000021140	sall4	99	52.035	ENSCPBG00000014995	SALL4	100	51.989	Chrysemys_picta_bellii
ENSPREG00000021140	sall4	100	43.831	ENSCANG00000036463	SALL4	100	44.550	Colobus_angolensis_palliatus
ENSPREG00000021140	sall4	100	41.916	ENSCGRG00001019569	Sall4	100	53.363	Cricetulus_griseus_chok1gshd
ENSPREG00000021140	sall4	100	41.652	ENSCGRG00000000462	Sall4	99	78.750	Cricetulus_griseus_crigri
ENSPREG00000021140	sall4	100	75.274	ENSCSEG00000014604	sall4	100	75.456	Cynoglossus_semilaevis
ENSPREG00000021140	sall4	100	85.780	ENSCVAG00000010815	sall4	100	85.965	Cyprinodon_variegatus
ENSPREG00000021140	sall4	99	63.496	ENSDARG00000044485	sall4	99	63.587	Danio_rerio
ENSPREG00000021140	sall4	100	44.694	ENSDNOG00000040633	SALL4	100	45.061	Dasypus_novemcinctus
ENSPREG00000021140	sall4	100	42.194	ENSDORG00000012841	Sall4	100	75.325	Dipodomys_ordii
ENSPREG00000021140	sall4	70	65.385	ENSETEG00000012475	-	64	65.385	Echinops_telfairi
ENSPREG00000021140	sall4	100	45.423	ENSECAG00000018533	SALL4	100	45.509	Equus_caballus
ENSPREG00000021140	sall4	100	43.937	ENSEEUG00000003649	SALL4	99	42.970	Erinaceus_europaeus
ENSPREG00000021140	sall4	100	64.810	ENSELUG00000005696	sall4	100	65.138	Esox_lucius
ENSPREG00000021140	sall4	100	44.816	ENSFCAG00000002822	SALL4	100	44.816	Felis_catus
ENSPREG00000021140	sall4	100	51.148	ENSFALG00000013149	SALL4	100	52.116	Ficedula_albicollis
ENSPREG00000021140	sall4	100	42.128	ENSFDAG00000017812	SALL4	100	42.683	Fukomys_damarensis
ENSPREG00000021140	sall4	100	86.544	ENSFHEG00000014187	sall4	100	86.544	Fundulus_heteroclitus
ENSPREG00000021140	sall4	100	68.956	ENSGMOG00000003822	sall4	100	68.956	Gadus_morhua
ENSPREG00000021140	sall4	100	51.630	ENSGALG00000041365	SALL4	100	52.507	Gallus_gallus
ENSPREG00000021140	sall4	100	95.476	ENSGAFG00000019925	sall4	100	95.476	Gambusia_affinis
ENSPREG00000021140	sall4	100	73.358	ENSGACG00000011124	sall4	100	73.540	Gasterosteus_aculeatus
ENSPREG00000021140	sall4	100	51.718	ENSGAGG00000002297	SALL4	100	51.800	Gopherus_agassizii
ENSPREG00000021140	sall4	100	44.146	ENSGGOG00000001832	SALL4	100	44.435	Gorilla_gorilla
ENSPREG00000021140	sall4	100	77.114	ENSHBUG00000007327	sall4	100	77.114	Haplochromis_burtoni
ENSPREG00000021140	sall4	98	43.750	ENSHGLG00000009043	SALL4	97	43.750	Heterocephalus_glaber_female
ENSPREG00000021140	sall4	98	43.750	ENSHGLG00100002722	SALL4	97	43.750	Heterocephalus_glaber_male
ENSPREG00000021140	sall4	100	74.359	ENSHCOG00000008519	sall4	100	74.451	Hippocampus_comes
ENSPREG00000021140	sall4	99	63.735	ENSIPUG00000019170	sall4	99	64.007	Ictalurus_punctatus
ENSPREG00000021140	sall4	63	54.634	ENSSTOG00000025002	SALL4	99	84.286	Ictidomys_tridecemlineatus
ENSPREG00000021140	sall4	100	44.629	ENSJJAG00000020688	Sall4	92	85.714	Jaculus_jaculus
ENSPREG00000021140	sall4	100	83.272	ENSKMAG00000002501	sall4	100	83.272	Kryptolebias_marmoratus
ENSPREG00000021140	sall4	100	76.465	ENSLBEG00000019951	sall4	100	76.465	Labrus_bergylta
ENSPREG00000021140	sall4	96	48.056	ENSLACG00000013898	SALL4	99	59.162	Latimeria_chalumnae
ENSPREG00000021140	sall4	100	61.071	ENSLOCG00000002427	sall4	100	61.357	Lepisosteus_oculatus
ENSPREG00000021140	sall4	100	45.447	ENSLAFG00000004309	SALL4	100	45.558	Loxodonta_africana
ENSPREG00000021140	sall4	100	44.118	ENSMFAG00000027169	SALL4	100	44.473	Macaca_fascicularis
ENSPREG00000021140	sall4	93	44.391	ENSMMUG00000003870	SALL4	100	56.158	Macaca_mulatta
ENSPREG00000021140	sall4	93	44.391	ENSMNEG00000035995	SALL4	99	44.689	Macaca_nemestrina
ENSPREG00000021140	sall4	100	44.204	ENSMLEG00000030467	SALL4	100	44.560	Mandrillus_leucophaeus
ENSPREG00000021140	sall4	100	77.858	ENSMAMG00000005223	sall4	100	77.858	Mastacembelus_armatus
ENSPREG00000021140	sall4	100	76.746	ENSMZEG00005023418	sall4	100	76.746	Maylandia_zebra
ENSPREG00000021140	sall4	75	65.385	ENSMGAG00000009344	SALL4	100	65.385	Meleagris_gallopavo
ENSPREG00000021140	sall4	100	42.209	ENSMAUG00000015814	Sall4	92	75.610	Mesocricetus_auratus
ENSPREG00000021140	sall4	100	44.801	ENSMICG00000000027	SALL4	100	45.043	Microcebus_murinus
ENSPREG00000021140	sall4	100	43.017	ENSMOCG00000018245	Sall4	99	83.333	Microtus_ochrogaster
ENSPREG00000021140	sall4	100	77.523	ENSMMOG00000014929	sall4	100	77.615	Mola_mola
ENSPREG00000021140	sall4	100	46.667	ENSMODG00000016387	SALL4	97	47.125	Monodelphis_domestica
ENSPREG00000021140	sall4	100	80.367	ENSMALG00000018709	sall4	100	80.648	Monopterus_albus
ENSPREG00000021140	sall4	100	43.139	MGP_CAROLIEiJ_G0024723	Sall4	99	85.915	Mus_caroli
ENSPREG00000021140	sall4	100	42.708	ENSMUSG00000027547	Sall4	99	85.915	Mus_musculus
ENSPREG00000021140	sall4	100	41.511	MGP_PahariEiJ_G0026164	Sall4	99	85.915	Mus_pahari
ENSPREG00000021140	sall4	100	42.708	MGP_SPRETEiJ_G0025643	Sall4	99	85.915	Mus_spretus
ENSPREG00000021140	sall4	100	43.564	ENSMPUG00000017543	SALL4	96	43.852	Mustela_putorius_furo
ENSPREG00000021140	sall4	99	34.969	ENSMLUG00000028073	-	99	34.701	Myotis_lucifugus
ENSPREG00000021140	sall4	100	41.607	ENSMLUG00000008405	-	100	41.607	Myotis_lucifugus
ENSPREG00000021140	sall4	98	43.896	ENSMLUG00000007060	-	99	43.896	Myotis_lucifugus
ENSPREG00000021140	sall4	100	43.635	ENSNGAG00000017833	Sall4	77	67.308	Nannospalax_galili
ENSPREG00000021140	sall4	100	75.989	ENSNBRG00000001829	sall4	100	76.449	Neolamprologus_brichardi
ENSPREG00000021140	sall4	100	44.146	ENSNLEG00000007013	SALL4	100	44.214	Nomascus_leucogenys
ENSPREG00000021140	sall4	90	59.615	ENSMEUG00000005793	-	99	65.385	Notamacropus_eugenii
ENSPREG00000021140	sall4	100	44.785	ENSOPRG00000011640	SALL4	100	44.785	Ochotona_princeps
ENSPREG00000021140	sall4	100	77.298	ENSONIG00000016557	sall4	100	77.574	Oreochromis_niloticus
ENSPREG00000021140	sall4	100	52.832	ENSOANG00000008667	SALL4	97	52.641	Ornithorhynchus_anatinus
ENSPREG00000021140	sall4	98	44.516	ENSOCUG00000011797	SALL4	100	44.516	Oryctolagus_cuniculus
ENSPREG00000021140	sall4	100	75.945	ENSORLG00000016130	sall4	100	75.945	Oryzias_latipes
ENSPREG00000021140	sall4	100	76.037	ENSORLG00020007339	sall4	100	76.037	Oryzias_latipes_hni
ENSPREG00000021140	sall4	100	75.945	ENSORLG00015002265	sall4	100	75.945	Oryzias_latipes_hsok
ENSPREG00000021140	sall4	100	77.030	ENSOMEG00000017344	sall4	100	77.030	Oryzias_melastigma
ENSPREG00000021140	sall4	97	45.240	ENSOGAG00000013799	SALL4	100	45.471	Otolemur_garnettii
ENSPREG00000021140	sall4	100	41.703	ENSOARG00000014570	SALL4	100	42.142	Ovis_aries
ENSPREG00000021140	sall4	100	44.425	ENSPPAG00000038064	SALL4	100	44.512	Pan_paniscus
ENSPREG00000021140	sall4	100	44.615	ENSPPRG00000008677	SALL4	100	44.615	Panthera_pardus
ENSPREG00000021140	sall4	100	44.232	ENSPTRG00000013631	SALL4	100	44.512	Pan_troglodytes
ENSPREG00000021140	sall4	93	44.391	ENSPANG00000021792	SALL4	99	44.689	Papio_anubis
ENSPREG00000021140	sall4	100	61.650	ENSPKIG00000007074	sall4	100	61.741	Paramormyrops_kingsleyae
ENSPREG00000021140	sall4	99	52.025	ENSPSIG00000009066	SALL4	100	52.373	Pelodiscus_sinensis
ENSPREG00000021140	sall4	100	65.622	ENSPMGG00000022551	sall4	100	65.961	Periophthalmus_magnuspinnatus
ENSPREG00000021140	sall4	100	42.907	ENSPEMG00000022706	Sall4	99	85.915	Peromyscus_maniculatus_bairdii
ENSPREG00000021140	sall4	100	48.611	ENSPCIG00000022838	SALL4	97	49.258	Phascolarctos_cinereus
ENSPREG00000021140	sall4	100	96.950	ENSPFOG00000001442	sall4	100	96.950	Poecilia_formosa
ENSPREG00000021140	sall4	100	96.858	ENSPLAG00000008760	sall4	100	96.858	Poecilia_latipinna
ENSPREG00000021140	sall4	100	97.227	ENSPMEG00000008497	sall4	100	97.227	Poecilia_mexicana
ENSPREG00000021140	sall4	100	44.377	ENSPPYG00000011138	SALL4	100	44.252	Pongo_abelii
ENSPREG00000021140	sall4	100	42.882	ENSPCAG00000004726	SALL4	99	43.357	Procavia_capensis
ENSPREG00000021140	sall4	100	44.107	ENSPCOG00000016321	SALL4	100	44.097	Propithecus_coquereli
ENSPREG00000021140	sall4	94	43.207	ENSPVAG00000002075	SALL4	94	43.364	Pteropus_vampyrus
ENSPREG00000021140	sall4	100	76.909	ENSPNYG00000021738	sall4	100	76.909	Pundamilia_nyererei
ENSPREG00000021140	sall4	99	65.091	ENSPNAG00000020929	sall4	99	65.847	Pygocentrus_nattereri
ENSPREG00000021140	sall4	100	42.760	ENSRNOG00000050035	Sall4	87	65.385	Rattus_norvegicus
ENSPREG00000021140	sall4	100	43.831	ENSRBIG00000039876	SALL4	100	44.550	Rhinopithecus_bieti
ENSPREG00000021140	sall4	100	43.917	ENSRROG00000036585	SALL4	100	44.637	Rhinopithecus_roxellana
ENSPREG00000021140	sall4	100	44.435	ENSSBOG00000030011	SALL4	100	44.358	Saimiri_boliviensis_boliviensis
ENSPREG00000021140	sall4	95	65.385	ENSSHAG00000018013	SALL4	90	65.385	Sarcophilus_harrisii
ENSPREG00000021140	sall4	100	62.094	ENSSFOG00015021075	sall4	100	62.455	Scleropages_formosus
ENSPREG00000021140	sall4	100	78.042	ENSSMAG00000019218	sall4	99	78.317	Scophthalmus_maximus
ENSPREG00000021140	sall4	100	80.128	ENSSDUG00000004657	sall4	100	80.220	Seriola_dumerili
ENSPREG00000021140	sall4	100	78.846	ENSSLDG00000004973	sall4	100	79.762	Seriola_lalandi_dorsalis
ENSPREG00000021140	sall4	100	79.596	ENSSPAG00000001978	sall4	100	79.688	Stegastes_partitus
ENSPREG00000021140	sall4	100	43.917	ENSSSCG00000007479	SALL4	100	43.917	Sus_scrofa
ENSPREG00000021140	sall4	100	74.634	ENSTRUG00000007410	sall4	100	74.634	Takifugu_rubripes
ENSPREG00000021140	sall4	100	72.752	ENSTNIG00000012460	sall4	100	73.578	Tetraodon_nigroviridis
ENSPREG00000021140	sall4	98	44.679	ENSTTRG00000007753	SALL4	99	44.587	Tursiops_truncatus
ENSPREG00000021140	sall4	100	44.358	ENSUAMG00000010113	SALL4	100	44.627	Ursus_americanus
ENSPREG00000021140	sall4	97	44.799	ENSUMAG00000024274	SALL4	97	44.799	Ursus_maritimus
ENSPREG00000021140	sall4	100	48.839	ENSXETG00000012326	sall4	100	48.839	Xenopus_tropicalis
ENSPREG00000021140	sall4	100	87.338	ENSXCOG00000015467	sall4	100	87.338	Xiphophorus_couchianus
ENSPREG00000021140	sall4	100	86.569	ENSXMAG00000012692	sall4	100	86.569	Xiphophorus_maculatus