EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000021231 (Gene tree)
Gene ID: 103465009
Gene Symbol: celf4
Alias: zgc:92761
Full Name: CUGBP Elav-like family member 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 110115 bases
Position: chrLG5:18213594-18323708
Accession: 103465009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031396	RRM_1	PF00076.22	9.1e-53	1	3
ENSPREP00000031396	RRM_1	PF00076.22	9.1e-53	2	3
ENSPREP00000031396	RRM_1	PF00076.22	9.1e-53	3	3
ENSPREP00000031378	RRM_1	PF00076.22	9.9e-53	1	3
ENSPREP00000031378	RRM_1	PF00076.22	9.9e-53	2	3
ENSPREP00000031378	RRM_1	PF00076.22	9.9e-53	3	3
ENSPREP00000031362	RRM_1	PF00076.22	1.2e-52	1	3
ENSPREP00000031362	RRM_1	PF00076.22	1.2e-52	2	3
ENSPREP00000031362	RRM_1	PF00076.22	1.2e-52	3	3
ENSPREP00000031419	RRM_1	PF00076.22	9.5e-42	1	3
ENSPREP00000031419	RRM_1	PF00076.22	9.5e-42	2	3
ENSPREP00000031419	RRM_1	PF00076.22	9.5e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031777	-	1320	-	ENSPREP00000031419	439 (aa)	-	-
ENSPRET00000031754	-	1461	XM_008409495	ENSPREP00000031396	486 (aa)	XP_008407717	UPI0004A2C961
ENSPRET00000031720	-	1572	XM_008409486	ENSPREP00000031362	523 (aa)	XP_008407708	UPI0004A36D5F
ENSPRET00000031736	-	1491	XM_017304668	ENSPREP00000031378	496 (aa)	XP_017160157	-

Gene Model

Click here to download ENSPREG00000021231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000021231	celf4	99	33.333	ENSPREG00000005877	-	98	49.383
ENSPREG00000021231	celf4	92	46.467	ENSPREG00000022185	-	92	48.584
ENSPREG00000021231	celf4	97	45.809	ENSPREG00000018002	-	82	80.952
ENSPREG00000021231	celf4	91	75.109	ENSPREG00000008235	celf5a	86	74.236
ENSPREG00000021231	celf4	69	32.895	ENSPREG00000019595	pabpc1a	90	37.349
ENSPREG00000021231	celf4	100	77.844	ENSPREG00000005911	si:dkey-205h23.2	100	77.445
ENSPREG00000021231	celf4	95	37.037	ENSPREG00000017160	ELAVL2	89	37.037
ENSPREG00000021231	celf4	95	45.059	ENSPREG00000007795	-	98	46.921
ENSPREG00000021231	celf4	67	36.250	ENSPREG00000011880	rbms3	58	35.802
ENSPREG00000021231	celf4	57	32.500	ENSPREG00000015038	rbms2a	62	32.500
ENSPREG00000021231	celf4	91	68.490	ENSPREG00000017378	celf3b	100	76.510
ENSPREG00000021231	celf4	91	71.616	ENSPREG00000018923	celf3a	100	71.554
ENSPREG00000021231	celf4	67	36.250	ENSPREG00000018221	-	62	36.250
ENSPREG00000021231	celf4	72	31.405	ENSPREG00000015886	pabpc1l	73	34.884
ENSPREG00000021231	celf4	94	35.802	ENSPREG00000018937	elavl4	73	40.741
ENSPREG00000021231	celf4	94	37.500	ENSPREG00000011054	elavl1a	88	45.679
ENSPREG00000021231	celf4	92	35.366	ENSPREG00000006971	elavl3	89	41.860
ENSPREG00000021231	celf4	61	39.216	ENSPREG00000008146	RBMS1	53	32.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021231	celf4	100	86.130	ENSG00000101489	CELF4	100	94.030	Homo_sapiens
ENSPREG00000021231	celf4	100	99.238	ENSAPOG00000002964	celf4	100	99.238	Acanthochromis_polyacanthus
ENSPREG00000021231	celf4	88	82.063	ENSAMEG00000017059	CELF4	99	82.735	Ailuropoda_melanoleuca
ENSPREG00000021231	celf4	100	94.118	ENSACIG00000018097	celf4	100	93.891	Amphilophus_citrinellus
ENSPREG00000021231	celf4	100	99.238	ENSAOCG00000020590	celf4	100	99.238	Amphiprion_ocellaris
ENSPREG00000021231	celf4	59	69.962	ENSAOCG00000019919	-	78	69.922	Amphiprion_ocellaris
ENSPREG00000021231	celf4	100	98.639	ENSAPEG00000002940	celf4	99	98.639	Amphiprion_percula
ENSPREG00000021231	celf4	100	98.413	ENSATEG00000023731	celf4	100	98.413	Anabas_testudineus
ENSPREG00000021231	celf4	72	75.063	ENSAPLG00000007830	-	100	74.811	Anas_platyrhynchos
ENSPREG00000021231	celf4	50	84.615	ENSACAG00000012428	CELF4	92	87.500	Anolis_carolinensis
ENSPREG00000021231	celf4	100	86.130	ENSANAG00000029499	CELF4	99	86.577	Aotus_nancymaae
ENSPREG00000021231	celf4	100	99.429	ENSACLG00000011828	celf4	100	99.429	Astatotilapia_calliptera
ENSPREG00000021231	celf4	100	93.905	ENSAMXG00000007935	celf4	100	93.905	Astyanax_mexicanus
ENSPREG00000021231	celf4	100	86.067	ENSBTAG00000004940	CELF4	98	92.683	Bos_taurus
ENSPREG00000021231	celf4	100	84.211	ENSCJAG00000021135	CELF4	99	84.649	Callithrix_jacchus
ENSPREG00000021231	celf4	100	82.591	ENSCHIG00000007169	CELF4	98	92.683	Capra_hircus
ENSPREG00000021231	celf4	89	88.037	ENSTSYG00000000816	CELF4	84	88.650	Carlito_syrichta
ENSPREG00000021231	celf4	100	79.175	ENSCPOG00000035956	CELF4	99	79.961	Cavia_porcellus
ENSPREG00000021231	celf4	100	86.130	ENSCCAG00000028373	CELF4	99	86.577	Cebus_capucinus
ENSPREG00000021231	celf4	100	86.130	ENSCATG00000045293	CELF4	99	86.577	Cercocebus_atys
ENSPREG00000021231	celf4	100	83.694	ENSCLAG00000008344	CELF4	99	84.479	Chinchilla_lanigera
ENSPREG00000021231	celf4	90	87.921	ENSCSAG00000017933	CELF4	100	89.888	Chlorocebus_sabaeus
ENSPREG00000021231	celf4	97	83.473	ENSCPBG00000005237	CELF4	96	84.034	Chrysemys_picta_bellii
ENSPREG00000021231	celf4	100	86.130	ENSCANG00000036735	CELF4	99	86.577	Colobus_angolensis_palliatus
ENSPREG00000021231	celf4	77	77.573	ENSCGRG00001018085	Celf4	89	79.420	Cricetulus_griseus_chok1gshd
ENSPREG00000021231	celf4	100	98.667	ENSCSEG00000007074	celf4	99	100.000	Cynoglossus_semilaevis
ENSPREG00000021231	celf4	100	99.093	ENSCVAG00000017617	celf4	99	99.093	Cyprinodon_variegatus
ENSPREG00000021231	celf4	100	94.667	ENSDARG00000070045	celf4	100	95.802	Danio_rerio
ENSPREG00000021231	celf4	90	84.511	ENSDNOG00000032492	CELF4	99	86.957	Dasypus_novemcinctus
ENSPREG00000021231	celf4	100	83.694	ENSDORG00000007169	Celf4	99	84.479	Dipodomys_ordii
ENSPREG00000021231	celf4	92	82.482	ENSETEG00000007432	-	71	82.482	Echinops_telfairi
ENSPREG00000021231	celf4	100	86.130	ENSEASG00005016534	CELF4	99	86.577	Equus_asinus_asinus
ENSPREG00000021231	celf4	100	81.151	ENSECAG00000008810	CELF4	99	81.746	Equus_caballus
ENSPREG00000021231	celf4	87	66.968	ENSEEUG00000003763	CELF4	99	67.647	Erinaceus_europaeus
ENSPREG00000021231	celf4	100	86.323	ENSFCAG00000045234	CELF4	99	86.771	Felis_catus
ENSPREG00000021231	celf4	90	89.045	ENSFALG00000009188	CELF4	98	90.169	Ficedula_albicollis
ENSPREG00000021231	celf4	100	79.764	ENSFDAG00000010287	CELF4	99	79.961	Fukomys_damarensis
ENSPREG00000021231	celf4	100	84.009	ENSFHEG00000003431	celf4	99	85.714	Fundulus_heteroclitus
ENSPREG00000021231	celf4	86	92.683	ENSGMOG00000011747	-	74	92.683	Gadus_morhua
ENSPREG00000021231	celf4	100	78.178	ENSGMOG00000008703	celf4	100	78.178	Gadus_morhua
ENSPREG00000021231	celf4	100	99.618	ENSGAFG00000021515	celf4	94	98.861	Gambusia_affinis
ENSPREG00000021231	celf4	100	90.720	ENSGACG00000008752	celf4	100	90.702	Gasterosteus_aculeatus
ENSPREG00000021231	celf4	71	85.185	ENSGAGG00000017672	-	86	90.217	Gopherus_agassizii
ENSPREG00000021231	celf4	64	81.789	ENSGAGG00000023014	-	98	83.067	Gopherus_agassizii
ENSPREG00000021231	celf4	100	86.130	ENSGGOG00000013920	CELF4	99	86.577	Gorilla_gorilla
ENSPREG00000021231	celf4	100	99.238	ENSHBUG00000021618	celf4	100	99.238	Haplochromis_burtoni
ENSPREG00000021231	celf4	100	80.943	ENSHGLG00000003130	CELF4	99	81.139	Heterocephalus_glaber_female
ENSPREG00000021231	celf4	100	83.104	ENSHGLG00100006394	CELF4	99	83.890	Heterocephalus_glaber_male
ENSPREG00000021231	celf4	100	94.820	ENSHCOG00000012195	celf4	99	94.820	Hippocampus_comes
ENSPREG00000021231	celf4	100	84.760	ENSIPUG00000010810	celf4	96	82.870	Ictalurus_punctatus
ENSPREG00000021231	celf4	100	82.908	ENSJJAG00000016892	Celf4	99	83.694	Jaculus_jaculus
ENSPREG00000021231	celf4	100	98.664	ENSKMAG00000019602	celf4	100	98.664	Kryptolebias_marmoratus
ENSPREG00000021231	celf4	100	97.959	ENSLBEG00000000940	celf4	99	97.959	Labrus_bergylta
ENSPREG00000021231	celf4	93	81.390	ENSLOCG00000004792	celf4	99	81.390	Lepisosteus_oculatus
ENSPREG00000021231	celf4	100	84.263	ENSLAFG00000021352	CELF4	99	85.060	Loxodonta_africana
ENSPREG00000021231	celf4	100	86.130	ENSMFAG00000042983	CELF4	99	86.577	Macaca_fascicularis
ENSPREG00000021231	celf4	100	81.511	ENSMMUG00000006866	CELF4	99	81.909	Macaca_mulatta
ENSPREG00000021231	celf4	100	86.130	ENSMNEG00000033449	CELF4	99	86.577	Macaca_nemestrina
ENSPREG00000021231	celf4	92	81.015	ENSMLEG00000028543	CELF4	99	81.236	Mandrillus_leucophaeus
ENSPREG00000021231	celf4	100	98.639	ENSMAMG00000018573	celf4	99	98.639	Mastacembelus_armatus
ENSPREG00000021231	celf4	100	95.692	ENSMZEG00005026879	celf4	99	95.692	Maylandia_zebra
ENSPREG00000021231	celf4	64	67.296	ENSMGAG00000017029	CELF4	100	67.508	Meleagris_gallopavo
ENSPREG00000021231	celf4	100	84.211	ENSMICG00000006984	CELF4	99	84.649	Microcebus_murinus
ENSPREG00000021231	celf4	100	83.897	ENSMOCG00000011985	Celf4	99	84.891	Microtus_ochrogaster
ENSPREG00000021231	celf4	100	97.732	ENSMMOG00000012281	celf4	100	97.732	Mola_mola
ENSPREG00000021231	celf4	79	70.757	ENSMODG00000000306	CELF4	91	78.613	Monodelphis_domestica
ENSPREG00000021231	celf4	100	99.048	ENSMALG00000001696	celf4	100	99.048	Monopterus_albus
ENSPREG00000021231	celf4	100	84.095	MGP_CAROLIEiJ_G0022058	Celf4	99	84.891	Mus_caroli
ENSPREG00000021231	celf4	100	84.242	ENSMUSG00000024268	Celf4	99	87.273	Mus_musculus
ENSPREG00000021231	celf4	100	84.095	MGP_PahariEiJ_G0018792	Celf4	99	84.891	Mus_pahari
ENSPREG00000021231	celf4	100	84.095	MGP_SPRETEiJ_G0022969	Celf4	99	84.891	Mus_spretus
ENSPREG00000021231	celf4	91	71.090	ENSMPUG00000001027	CELF4	81	92.857	Mustela_putorius_furo
ENSPREG00000021231	celf4	90	87.131	ENSMLUG00000001755	CELF4	100	87.131	Myotis_lucifugus
ENSPREG00000021231	celf4	100	84.294	ENSNGAG00000000761	Celf4	99	85.089	Nannospalax_galili
ENSPREG00000021231	celf4	100	95.692	ENSNBRG00000018194	celf4	99	95.692	Neolamprologus_brichardi
ENSPREG00000021231	celf4	77	77.937	ENSMEUG00000007202	-	100	78.510	Notamacropus_eugenii
ENSPREG00000021231	celf4	89	80.625	ENSOPRG00000014415	CELF4	89	82.484	Ochotona_princeps
ENSPREG00000021231	celf4	100	84.294	ENSODEG00000018464	CELF4	99	85.089	Octodon_degus
ENSPREG00000021231	celf4	100	99.048	ENSONIG00000019463	celf4	100	99.048	Oreochromis_niloticus
ENSPREG00000021231	celf4	87	85.000	ENSOCUG00000024790	CELF4	81	85.682	Oryctolagus_cuniculus
ENSPREG00000021231	celf4	100	99.048	ENSORLG00000008913	celf4	100	99.048	Oryzias_latipes
ENSPREG00000021231	celf4	100	99.048	ENSORLG00020008454	celf4	100	99.048	Oryzias_latipes_hni
ENSPREG00000021231	celf4	100	99.048	ENSORLG00015004115	celf4	100	99.048	Oryzias_latipes_hsok
ENSPREG00000021231	celf4	100	99.238	ENSOMEG00000002391	celf4	100	99.238	Oryzias_melastigma
ENSPREG00000021231	celf4	91	80.000	ENSOGAG00000010018	CELF4	100	81.647	Otolemur_garnettii
ENSPREG00000021231	celf4	64	84.076	ENSOARG00000005276	CELF4	100	86.943	Ovis_aries
ENSPREG00000021231	celf4	92	84.547	ENSPPAG00000020644	CELF4	99	84.768	Pan_paniscus
ENSPREG00000021231	celf4	100	86.130	ENSPPRG00000007683	CELF4	99	86.577	Panthera_pardus
ENSPREG00000021231	celf4	100	86.130	ENSPTRG00000009982	CELF4	99	86.577	Pan_troglodytes
ENSPREG00000021231	celf4	100	86.130	ENSPANG00000006365	CELF4	99	86.577	Papio_anubis
ENSPREG00000021231	celf4	100	91.422	ENSPKIG00000017421	celf4	99	90.745	Paramormyrops_kingsleyae
ENSPREG00000021231	celf4	90	89.045	ENSPSIG00000015538	CELF4	98	90.169	Pelodiscus_sinensis
ENSPREG00000021231	celf4	100	84.095	ENSPEMG00000019299	Celf4	99	84.891	Peromyscus_maniculatus_bairdii
ENSPREG00000021231	celf4	80	97.207	ENSPLAG00000012151	celf4	89	97.207	Poecilia_latipinna
ENSPREG00000021231	celf4	100	86.937	ENSPMEG00000015313	celf4	97	100.000	Poecilia_mexicana
ENSPREG00000021231	celf4	83	82.000	ENSPCAG00000000126	CELF4	81	85.380	Procavia_capensis
ENSPREG00000021231	celf4	100	81.188	ENSPVAG00000009204	CELF4	99	81.782	Pteropus_vampyrus
ENSPREG00000021231	celf4	100	95.692	ENSPNYG00000004131	celf4	99	95.692	Pundamilia_nyererei
ENSPREG00000021231	celf4	100	93.852	ENSPNAG00000006426	celf4	100	93.852	Pygocentrus_nattereri
ENSPREG00000021231	celf4	87	80.857	ENSRNOG00000014503	Celf4	100	81.714	Rattus_norvegicus
ENSPREG00000021231	celf4	100	86.323	ENSRBIG00000035924	CELF4	99	86.771	Rhinopithecus_bieti
ENSPREG00000021231	celf4	100	86.130	ENSRROG00000014839	CELF4	99	86.577	Rhinopithecus_roxellana
ENSPREG00000021231	celf4	100	85.235	ENSSBOG00000030001	CELF4	99	85.682	Saimiri_boliviensis_boliviensis
ENSPREG00000021231	celf4	84	84.756	ENSSHAG00000009193	CELF4	96	85.185	Sarcophilus_harrisii
ENSPREG00000021231	celf4	100	85.861	ENSSFOG00015010874	celf4	100	86.475	Scleropages_formosus
ENSPREG00000021231	celf4	100	97.015	ENSSMAG00000009331	celf4	100	100.000	Scophthalmus_maximus
ENSPREG00000021231	celf4	100	82.653	ENSSLDG00000018548	celf4	100	82.653	Seriola_lalandi_dorsalis
ENSPREG00000021231	celf4	100	85.510	ENSSPAG00000018307	celf4	100	85.510	Stegastes_partitus
ENSPREG00000021231	celf4	100	84.464	ENSSSCG00000003748	CELF4	99	92.857	Sus_scrofa
ENSPREG00000021231	celf4	90	89.045	ENSTGUG00000001649	CELF4	98	90.169	Taeniopygia_guttata
ENSPREG00000021231	celf4	100	95.918	ENSTRUG00000015481	celf4	100	95.918	Takifugu_rubripes
ENSPREG00000021231	celf4	99	85.049	ENSTNIG00000010679	celf4	99	84.660	Tetraodon_nigroviridis
ENSPREG00000021231	celf4	91	86.207	ENSTBEG00000010647	CELF4	87	86.207	Tupaia_belangeri
ENSPREG00000021231	celf4	100	80.990	ENSTTRG00000016826	CELF4	99	81.584	Tursiops_truncatus
ENSPREG00000021231	celf4	82	85.217	ENSUAMG00000005506	CELF4	83	86.087	Ursus_americanus
ENSPREG00000021231	celf4	55	82.000	ENSVPAG00000009042	-	70	82.000	Vicugna_pacos
ENSPREG00000021231	celf4	100	82.236	ENSVVUG00000027721	CELF4	99	82.834	Vulpes_vulpes
ENSPREG00000021231	celf4	90	86.721	ENSXETG00000020486	celf4	98	87.263	Xenopus_tropicalis
ENSPREG00000021231	celf4	90	92.786	ENSXCOG00000017592	celf4	97	90.094	Xiphophorus_couchianus
ENSPREG00000021231	celf4	100	99.426	ENSXMAG00000018178	celf4	100	99.426	Xiphophorus_maculatus