EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000021246 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4815 bases
Position: chrLG13:32703928-32708742
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	1	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	2	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	3	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	4	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	5	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	6	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	7	8
ENSPREP00000031363	zf-C2H2	PF00096.26	4.5e-48	8	8
ENSPREP00000031363	zf-met	PF12874.7	1.8e-13	1	3
ENSPREP00000031363	zf-met	PF12874.7	1.8e-13	2	3
ENSPREP00000031363	zf-met	PF12874.7	1.8e-13	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031721	-	1440	-	ENSPREP00000031363	479 (aa)	-	-

Gene Model

Click here to download ENSPREG00000021246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000021246	-	92	44.205	ENSPREG00000019161	-	87	52.632
ENSPREG00000021246	-	95	38.224	ENSPREG00000001823	-	89	38.039
ENSPREG00000021246	-	91	37.000	ENSPREG00000020897	zbtb47b	54	37.000
ENSPREG00000021246	-	91	39.655	ENSPREG00000002696	-	79	39.655
ENSPREG00000021246	-	91	33.491	ENSPREG00000003555	-	96	35.422
ENSPREG00000021246	-	93	33.189	ENSPREG00000007146	-	66	33.189
ENSPREG00000021246	-	94	38.484	ENSPREG00000015247	-	77	38.484
ENSPREG00000021246	-	92	37.500	ENSPREG00000018366	prdm5	76	37.500
ENSPREG00000021246	-	77	41.844	ENSPREG00000002615	-	57	41.844
ENSPREG00000021246	-	91	44.037	ENSPREG00000004306	-	98	46.296
ENSPREG00000021246	-	91	44.961	ENSPREG00000001743	-	76	44.961
ENSPREG00000021246	-	91	38.843	ENSPREG00000014348	-	58	38.843
ENSPREG00000021246	-	90	41.739	ENSPREG00000008826	-	88	33.431
ENSPREG00000021246	-	97	43.220	ENSPREG00000014851	-	75	43.220
ENSPREG00000021246	-	97	37.129	ENSPREG00000014800	-	98	37.598
ENSPREG00000021246	-	92	37.975	ENSPREG00000021718	gfi1b	51	37.975
ENSPREG00000021246	-	95	40.777	ENSPREG00000003614	-	99	40.777
ENSPREG00000021246	-	90	31.034	ENSPREG00000016116	-	99	38.596
ENSPREG00000021246	-	95	38.580	ENSPREG00000019972	-	99	38.580
ENSPREG00000021246	-	92	38.095	ENSPREG00000013689	-	96	40.851
ENSPREG00000021246	-	91	45.038	ENSPREG00000003650	-	56	45.038
ENSPREG00000021246	-	93	42.771	ENSPREG00000015689	-	98	42.771
ENSPREG00000021246	-	94	34.965	ENSPREG00000018985	scrt1b	56	34.965
ENSPREG00000021246	-	92	43.609	ENSPREG00000000853	-	74	43.609
ENSPREG00000021246	-	96	39.297	ENSPREG00000004839	-	95	38.095
ENSPREG00000021246	-	91	37.102	ENSPREG00000013965	-	99	37.597
ENSPREG00000021246	-	98	38.403	ENSPREG00000004672	-	84	38.403
ENSPREG00000021246	-	91	40.179	ENSPREG00000003523	-	54	40.179
ENSPREG00000021246	-	94	40.833	ENSPREG00000014028	-	100	42.381
ENSPREG00000021246	-	95	33.202	ENSPREG00000019990	-	94	33.465
ENSPREG00000021246	-	91	32.826	ENSPREG00000001101	znf319b	79	32.696
ENSPREG00000021246	-	94	42.056	ENSPREG00000009372	-	88	42.056
ENSPREG00000021246	-	95	44.545	ENSPREG00000001713	-	98	44.545
ENSPREG00000021246	-	91	34.771	ENSPREG00000016220	-	68	34.771
ENSPREG00000021246	-	91	40.000	ENSPREG00000014945	-	99	40.000
ENSPREG00000021246	-	91	39.749	ENSPREG00000013727	-	70	39.749
ENSPREG00000021246	-	91	34.254	ENSPREG00000015226	-	100	34.254
ENSPREG00000021246	-	96	39.818	ENSPREG00000000364	-	70	39.697
ENSPREG00000021246	-	94	34.405	ENSPREG00000016144	-	87	34.405
ENSPREG00000021246	-	95	40.146	ENSPREG00000011439	-	99	38.720
ENSPREG00000021246	-	96	35.926	ENSPREG00000016129	-	99	35.926
ENSPREG00000021246	-	92	39.564	ENSPREG00000020014	-	92	39.144
ENSPREG00000021246	-	84	34.328	ENSPREG00000012166	-	56	34.328
ENSPREG00000021246	-	91	37.640	ENSPREG00000002664	-	95	37.640
ENSPREG00000021246	-	90	35.606	ENSPREG00000008528	SNAI2	68	33.577
ENSPREG00000021246	-	96	37.023	ENSPREG00000013699	-	67	37.023
ENSPREG00000021246	-	91	40.461	ENSPREG00000014360	-	68	40.461
ENSPREG00000021246	-	92	36.422	ENSPREG00000000449	-	68	37.113
ENSPREG00000021246	-	94	36.947	ENSPREG00000014366	-	96	36.947
ENSPREG00000021246	-	94	37.870	ENSPREG00000017631	znf668	85	34.123
ENSPREG00000021246	-	96	30.675	ENSPREG00000017637	znf646	95	30.675
ENSPREG00000021246	-	96	37.537	ENSPREG00000015017	-	93	41.606
ENSPREG00000021246	-	94	37.788	ENSPREG00000002681	-	73	37.788
ENSPREG00000021246	-	96	40.072	ENSPREG00000012132	-	99	38.499
ENSPREG00000021246	-	91	42.767	ENSPREG00000002548	-	82	38.926
ENSPREG00000021246	-	91	40.942	ENSPREG00000003217	-	80	40.942
ENSPREG00000021246	-	92	34.783	ENSPREG00000003213	-	71	34.783
ENSPREG00000021246	-	91	47.619	ENSPREG00000014477	-	95	43.243
ENSPREG00000021246	-	91	40.361	ENSPREG00000001774	-	79	40.361
ENSPREG00000021246	-	91	41.401	ENSPREG00000019806	-	67	39.205
ENSPREG00000021246	-	92	38.650	ENSPREG00000016249	-	82	38.650
ENSPREG00000021246	-	91	35.336	ENSPREG00000016186	-	60	40.870
ENSPREG00000021246	-	91	40.972	ENSPREG00000015421	-	67	40.972
ENSPREG00000021246	-	95	33.459	ENSPREG00000016858	ZNF319	95	32.265
ENSPREG00000021246	-	95	39.695	ENSPREG00000010261	zbtb17	89	39.695
ENSPREG00000021246	-	93	38.380	ENSPREG00000012539	-	69	38.380
ENSPREG00000021246	-	94	37.799	ENSPREG00000014330	-	61	36.000
ENSPREG00000021246	-	91	44.444	ENSPREG00000004006	-	54	44.444
ENSPREG00000021246	-	91	38.356	ENSPREG00000000467	-	58	38.356
ENSPREG00000021246	-	91	41.818	ENSPREG00000017892	-	55	41.818
ENSPREG00000021246	-	91	41.463	ENSPREG00000009495	-	84	40.000
ENSPREG00000021246	-	92	35.862	ENSPREG00000004728	-	72	35.862
ENSPREG00000021246	-	92	39.086	ENSPREG00000010437	-	78	39.086
ENSPREG00000021246	-	98	39.571	ENSPREG00000011741	-	96	39.516
ENSPREG00000021246	-	92	38.567	ENSPREG00000014340	-	77	38.567
ENSPREG00000021246	-	92	41.912	ENSPREG00000007997	GFI1	51	40.127
ENSPREG00000021246	-	91	38.971	ENSPREG00000016270	-	81	38.971
ENSPREG00000021246	-	91	36.170	ENSPREG00000002582	-	77	36.170
ENSPREG00000021246	-	93	38.743	ENSPREG00000006360	-	50	38.743
ENSPREG00000021246	-	94	34.981	ENSPREG00000014898	-	67	34.981
ENSPREG00000021246	-	93	37.963	ENSPREG00000002642	-	93	37.394
ENSPREG00000021246	-	93	37.879	ENSPREG00000003193	-	100	37.879
ENSPREG00000021246	-	91	36.066	ENSPREG00000013154	-	99	36.066
ENSPREG00000021246	-	91	42.105	ENSPREG00000005015	-	96	37.915
ENSPREG00000021246	-	91	37.349	ENSPREG00000014105	-	82	35.000
ENSPREG00000021246	-	79	39.695	ENSPREG00000002603	-	83	39.695
ENSPREG00000021246	-	70	48.052	ENSPREG00000003532	-	100	48.052
ENSPREG00000021246	-	94	42.308	ENSPREG00000016308	-	66	42.308
ENSPREG00000021246	-	92	37.275	ENSPREG00000002637	-	73	37.275
ENSPREG00000021246	-	95	35.789	ENSPREG00000013112	-	90	36.364
ENSPREG00000021246	-	94	40.678	ENSPREG00000009488	-	95	40.678
ENSPREG00000021246	-	93	38.596	ENSPREG00000015254	-	65	38.596
ENSPREG00000021246	-	91	39.855	ENSPREG00000015081	-	91	39.855
ENSPREG00000021246	-	94	35.381	ENSPREG00000001386	-	88	35.381
ENSPREG00000021246	-	95	39.286	ENSPREG00000003483	-	89	39.286
ENSPREG00000021246	-	91	38.272	ENSPREG00000014127	-	86	38.272
ENSPREG00000021246	-	91	39.274	ENSPREG00000013107	-	65	39.274
ENSPREG00000021246	-	91	39.837	ENSPREG00000015132	-	68	38.667
ENSPREG00000021246	-	91	40.419	ENSPREG00000001514	zgc:113343	73	38.909
ENSPREG00000021246	-	92	36.975	ENSPREG00000004745	-	82	36.986
ENSPREG00000021246	-	95	39.117	ENSPREG00000003894	-	88	40.066
ENSPREG00000021246	-	94	33.977	ENSPREG00000007135	-	68	34.174
ENSPREG00000021246	-	97	39.701	ENSPREG00000000733	-	87	39.701
ENSPREG00000021246	-	97	37.442	ENSPREG00000002181	-	95	38.015
ENSPREG00000021246	-	91	33.951	ENSPREG00000008907	-	70	33.951
ENSPREG00000021246	-	92	38.753	ENSPREG00000003393	-	74	38.753
ENSPREG00000021246	-	94	38.623	ENSPREG00000021537	-	77	38.623
ENSPREG00000021246	-	96	39.607	ENSPREG00000015286	-	95	39.721
ENSPREG00000021246	-	91	38.868	ENSPREG00000006537	-	95	37.838
ENSPREG00000021246	-	94	40.164	ENSPREG00000004725	-	70	40.164
ENSPREG00000021246	-	96	41.401	ENSPREG00000013780	-	95	39.733
ENSPREG00000021246	-	96	41.667	ENSPREG00000004571	-	99	41.667
ENSPREG00000021246	-	94	39.695	ENSPREG00000004036	-	92	38.267
ENSPREG00000021246	-	96	39.441	ENSPREG00000013476	-	100	39.706
ENSPREG00000021246	-	95	44.186	ENSPREG00000002715	-	81	40.000
ENSPREG00000021246	-	91	38.403	ENSPREG00000013719	-	74	38.403
ENSPREG00000021246	-	91	41.489	ENSPREG00000001952	-	95	41.489
ENSPREG00000021246	-	91	36.250	ENSPREG00000023113	si:ch211-166g5.4	88	40.845
ENSPREG00000021246	-	91	40.690	ENSPREG00000001441	-	99	37.531
ENSPREG00000021246	-	78	46.078	ENSPREG00000021924	-	73	46.078
ENSPREG00000021246	-	90	33.209	ENSPREG00000005538	-	84	33.209
ENSPREG00000021246	-	96	35.730	ENSPREG00000000153	-	85	35.730
ENSPREG00000021246	-	94	38.182	ENSPREG00000015342	-	74	38.182
ENSPREG00000021246	-	95	38.672	ENSPREG00000005144	-	99	38.095
ENSPREG00000021246	-	90	36.066	ENSPREG00000015352	-	73	36.066
ENSPREG00000021246	-	93	34.722	ENSPREG00000009121	-	71	34.722
ENSPREG00000021246	-	91	40.206	ENSPREG00000014373	-	84	40.206
ENSPREG00000021246	-	93	34.805	ENSPREG00000016204	-	65	34.988
ENSPREG00000021246	-	92	36.029	ENSPREG00000000451	-	79	36.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021246	-	97	74.349	ENSAPOG00000001563	-	84	72.907	Acanthochromis_polyacanthus
ENSPREG00000021246	-	99	66.736	ENSACIG00000015411	-	88	66.736	Amphilophus_citrinellus
ENSPREG00000021246	-	93	68.220	ENSAOCG00000013589	-	92	68.220	Amphiprion_ocellaris
ENSPREG00000021246	-	91	82.427	ENSAOCG00000013505	-	51	82.258	Amphiprion_ocellaris
ENSPREG00000021246	-	93	66.816	ENSAPEG00000022774	-	86	66.816	Amphiprion_percula
ENSPREG00000021246	-	91	82.008	ENSAPEG00000022756	-	52	81.526	Amphiprion_percula
ENSPREG00000021246	-	93	65.574	ENSATEG00000019261	-	80	65.574	Anabas_testudineus
ENSPREG00000021246	-	98	66.341	ENSACLG00000008624	-	89	66.341	Astatotilapia_calliptera
ENSPREG00000021246	-	96	83.275	ENSACLG00000008606	-	93	83.275	Astatotilapia_calliptera
ENSPREG00000021246	-	97	68.924	ENSCSEG00000008903	-	83	62.284	Cynoglossus_semilaevis
ENSPREG00000021246	-	92	93.469	ENSCVAG00000016534	-	52	93.548	Cyprinodon_variegatus
ENSPREG00000021246	-	94	57.703	ENSGMOG00000000494	-	99	58.543	Gadus_morhua
ENSPREG00000021246	-	99	91.339	ENSGAFG00000002659	-	64	88.386	Gambusia_affinis
ENSPREG00000021246	-	99	72.638	ENSGACG00000001377	-	99	71.581	Gasterosteus_aculeatus
ENSPREG00000021246	-	98	64.876	ENSHBUG00000008502	-	92	64.876	Haplochromis_burtoni
ENSPREG00000021246	-	99	71.595	ENSHCOG00000000511	-	94	67.901	Hippocampus_comes
ENSPREG00000021246	-	98	68.612	ENSLBEG00000018509	-	93	65.922	Labrus_bergylta
ENSPREG00000021246	-	97	74.800	ENSMAMG00000018137	-	67	72.888	Mastacembelus_armatus
ENSPREG00000021246	-	97	66.245	ENSMZEG00005002583	-	89	66.245	Maylandia_zebra
ENSPREG00000021246	-	94	61.972	ENSMMOG00000009733	-	83	66.197	Mola_mola
ENSPREG00000021246	-	91	58.371	ENSMALG00000019991	-	96	54.317	Monopterus_albus
ENSPREG00000021246	-	92	83.162	ENSNBRG00000008223	-	79	85.714	Neolamprologus_brichardi
ENSPREG00000021246	-	93	75.636	ENSONIG00000017233	-	99	63.347	Oreochromis_niloticus
ENSPREG00000021246	-	91	74.895	ENSOMEG00000016463	-	61	75.000	Oryzias_melastigma
ENSPREG00000021246	-	95	43.946	ENSPMGG00000002384	-	94	47.297	Periophthalmus_magnuspinnatus
ENSPREG00000021246	-	99	92.717	ENSPFOG00000006287	-	73	89.567	Poecilia_formosa
ENSPREG00000021246	-	99	92.717	ENSPMEG00000005897	-	67	89.567	Poecilia_mexicana
ENSPREG00000021246	-	93	82.083	ENSPNYG00000023088	-	92	65.289	Pundamilia_nyererei
ENSPREG00000021246	-	99	75.246	ENSSDUG00000004892	-	96	55.429	Seriola_dumerili
ENSPREG00000021246	-	93	72.198	ENSSLDG00000005670	-	93	72.198	Seriola_lalandi_dorsalis
ENSPREG00000021246	-	97	69.268	ENSSPAG00000022219	-	65	69.268	Stegastes_partitus
ENSPREG00000021246	-	96	76.652	ENSTNIG00000011188	-	98	76.652	Tetraodon_nigroviridis
ENSPREG00000021246	-	83	72.269	ENSXCOG00000012645	-	61	72.269	Xiphophorus_couchianus
ENSPREG00000021246	-	99	90.551	ENSXMAG00000000866	-	60	87.598	Xiphophorus_maculatus