EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000021254 (Gene tree)
Gene ID: 103474517
Gene Symbol: zgc:114130
Alias: -
Full Name: zinc finger protein 36%2C C3H1 type-like 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 4283 bases
Position: chrLG13:13779304-13783586
Accession: 103474517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031368	zf-CCCH	PF00642.24	2.7e-20	1	2
ENSPREP00000031368	zf-CCCH	PF00642.24	2.7e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000031726	-	1293	XM_008425557	ENSPREP00000031368	430 (aa)	XP_008423779	UPI0004A4156B

Gene Model

Click here to download ENSPREG00000021254's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000021254	zgc:114130	59	40.221	ENSPREG00000021263	zgc:162730	60	36.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021254	zgc:114130	100	69.091	ENSAPOG00000014912	zgc:114130	98	68.864	Acanthochromis_polyacanthus
ENSPREG00000021254	zgc:114130	83	67.493	ENSACIG00000017364	zgc:114130	96	69.697	Amphilophus_citrinellus
ENSPREG00000021254	zgc:114130	100	68.409	ENSAOCG00000022227	zgc:114130	98	68.182	Amphiprion_ocellaris
ENSPREG00000021254	zgc:114130	100	67.882	ENSAPEG00000015497	zgc:114130	98	67.654	Amphiprion_percula
ENSPREG00000021254	zgc:114130	100	67.955	ENSATEG00000008781	zgc:114130	98	67.727	Anabas_testudineus
ENSPREG00000021254	zgc:114130	63	40.268	ENSACLG00000013759	sb:cb81	99	36.481	Astatotilapia_calliptera
ENSPREG00000021254	zgc:114130	100	65.826	ENSACLG00000022113	zgc:114130	98	65.596	Astatotilapia_calliptera
ENSPREG00000021254	zgc:114130	100	43.430	ENSAMXG00000038581	zgc:114130	95	43.459	Astyanax_mexicanus
ENSPREG00000021254	zgc:114130	73	37.952	ENSAMXG00000034874	sb:cb81	73	38.643	Astyanax_mexicanus
ENSPREG00000021254	zgc:114130	100	59.375	ENSCSEG00000018290	zgc:114130	98	60.314	Cynoglossus_semilaevis
ENSPREG00000021254	zgc:114130	57	38.023	ENSCSEG00000018283	zgc:162730	94	30.709	Cynoglossus_semilaevis
ENSPREG00000021254	zgc:114130	100	79.767	ENSCVAG00000018574	zgc:114130	100	79.767	Cyprinodon_variegatus
ENSPREG00000021254	zgc:114130	100	45.928	ENSDARG00000040725	zgc:114130	96	45.351	Danio_rerio
ENSPREG00000021254	zgc:114130	99	36.961	ENSDARG00000040503	sb:cb81	99	36.384	Danio_rerio
ENSPREG00000021254	zgc:114130	100	47.153	ENSELUG00000013151	zgc:114130	97	47.153	Esox_lucius
ENSPREG00000021254	zgc:114130	99	35.111	ENSELUG00000013045	sb:cb81	73	36.858	Esox_lucius
ENSPREG00000021254	zgc:114130	100	77.083	ENSFHEG00000000656	zgc:114130	100	78.935	Fundulus_heteroclitus
ENSPREG00000021254	zgc:114130	79	52.754	ENSGMOG00000017223	zgc:114130	99	54.203	Gadus_morhua
ENSPREG00000021254	zgc:114130	81	87.143	ENSGAFG00000009949	zgc:114130	92	86.571	Gambusia_affinis
ENSPREG00000021254	zgc:114130	79	67.941	ENSGACG00000008344	zgc:114130	99	68.328	Gasterosteus_aculeatus
ENSPREG00000021254	zgc:114130	100	66.284	ENSHBUG00000015051	zgc:114130	98	66.514	Haplochromis_burtoni
ENSPREG00000021254	zgc:114130	100	58.391	ENSHCOG00000015800	zgc:114130	96	58.391	Hippocampus_comes
ENSPREG00000021254	zgc:114130	100	40.920	ENSIPUG00000018256	zgc:114130	79	40.000	Ictalurus_punctatus
ENSPREG00000021254	zgc:114130	62	39.852	ENSIPUG00000011378	sb:cb81	68	38.768	Ictalurus_punctatus
ENSPREG00000021254	zgc:114130	100	69.005	ENSKMAG00000019287	zgc:114130	98	68.326	Kryptolebias_marmoratus
ENSPREG00000021254	zgc:114130	100	62.587	ENSLBEG00000018387	zgc:114130	98	63.218	Labrus_bergylta
ENSPREG00000021254	zgc:114130	99	36.878	ENSLACG00000015732	sb:cb81	99	35.601	Latimeria_chalumnae
ENSPREG00000021254	zgc:114130	66	35.197	ENSLACG00000015980	-	66	36.700	Latimeria_chalumnae
ENSPREG00000021254	zgc:114130	73	38.485	ENSLOCG00000014587	sb:cb81	74	39.091	Lepisosteus_oculatus
ENSPREG00000021254	zgc:114130	100	65.207	ENSMAMG00000007511	zgc:114130	96	66.590	Mastacembelus_armatus
ENSPREG00000021254	zgc:114130	77	33.828	ENSMZEG00005014415	zgc:162730	62	37.126	Maylandia_zebra
ENSPREG00000021254	zgc:114130	63	39.597	ENSMZEG00005024684	sb:cb81	99	36.403	Maylandia_zebra
ENSPREG00000021254	zgc:114130	63	39.731	ENSMZEG00005016001	-	99	36.481	Maylandia_zebra
ENSPREG00000021254	zgc:114130	100	66.055	ENSMZEG00005014410	zgc:114130	98	66.284	Maylandia_zebra
ENSPREG00000021254	zgc:114130	84	67.030	ENSMMOG00000011504	zgc:114130	96	67.847	Mola_mola
ENSPREG00000021254	zgc:114130	66	66.667	ENSMALG00000021140	-	96	68.421	Monopterus_albus
ENSPREG00000021254	zgc:114130	80	65.318	ENSNBRG00000013703	zgc:114130	94	65.318	Neolamprologus_brichardi
ENSPREG00000021254	zgc:114130	66	45.172	ENSONIG00000001259	sb:cb81	99	36.325	Oreochromis_niloticus
ENSPREG00000021254	zgc:114130	79	65.896	ENSONIG00000005004	zgc:114130	99	66.474	Oreochromis_niloticus
ENSPREG00000021254	zgc:114130	64	37.024	ENSORLG00000024026	sb:cb81	58	37.380	Oryzias_latipes
ENSPREG00000021254	zgc:114130	59	39.781	ENSORLG00020020289	zgc:162730	61	36.972	Oryzias_latipes_hni
ENSPREG00000021254	zgc:114130	64	36.934	ENSORLG00015010105	sb:cb81	99	35.683	Oryzias_latipes_hsok
ENSPREG00000021254	zgc:114130	100	93.533	ENSPFOG00000003653	zgc:114130	100	94.457	Poecilia_formosa
ENSPREG00000021254	zgc:114130	100	95.360	ENSPLAG00000000947	zgc:114130	100	95.360	Poecilia_latipinna
ENSPREG00000021254	zgc:114130	59	40.449	ENSPLAG00000000946	zgc:162730	60	36.364	Poecilia_latipinna
ENSPREG00000021254	zgc:114130	59	40.075	ENSPMEG00000000341	zgc:162730	60	35.971	Poecilia_mexicana
ENSPREG00000021254	zgc:114130	100	92.361	ENSPMEG00000015335	zgc:114130	100	93.287	Poecilia_mexicana
ENSPREG00000021254	zgc:114130	63	39.860	ENSPNYG00000007502	sb:cb81	99	35.762	Pundamilia_nyererei
ENSPREG00000021254	zgc:114130	100	65.596	ENSPNYG00000015546	zgc:114130	98	65.596	Pundamilia_nyererei
ENSPREG00000021254	zgc:114130	100	37.665	ENSPNAG00000023029	zgc:114130	96	40.757	Pygocentrus_nattereri
ENSPREG00000021254	zgc:114130	66	36.934	ENSSFOG00015003179	sb:cb81	99	30.719	Scleropages_formosus
ENSPREG00000021254	zgc:114130	100	64.009	ENSSMAG00000018621	zgc:114130	95	65.148	Scophthalmus_maximus
ENSPREG00000021254	zgc:114130	100	69.545	ENSSDUG00000002237	zgc:114130	100	69.773	Seriola_dumerili
ENSPREG00000021254	zgc:114130	100	69.021	ENSSLDG00000008496	zgc:114130	100	69.248	Seriola_lalandi_dorsalis
ENSPREG00000021254	zgc:114130	100	68.807	ENSSPAG00000006856	zgc:114130	98	68.349	Stegastes_partitus
ENSPREG00000021254	zgc:114130	64	36.644	ENSTRUG00000020720	sb:cb81	69	37.695	Takifugu_rubripes
ENSPREG00000021254	zgc:114130	100	60.412	ENSTRUG00000022473	zgc:114130	98	61.416	Takifugu_rubripes
ENSPREG00000021254	zgc:114130	91	75.703	ENSXCOG00000012792	zgc:114130	96	75.448	Xiphophorus_couchianus
ENSPREG00000021254	zgc:114130	100	93.968	ENSXMAG00000026836	zgc:114130	100	93.968	Xiphophorus_maculatus