EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000021416 (Gene tree)
Gene ID
103464978
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Minus strand
Length
30809 bases
Position
chrLG5:18739208-18770016
Accession
103464978
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000031615RRM_1PF00076.221.8e-2912
ENSPREP00000031615RRM_1PF00076.221.8e-2922
ENSPREP00000031623RRM_1PF00076.222.9e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000031974-990XM_017304959ENSPREP00000031615329 (aa)XP_017160448-
ENSPRET00000031982-894-ENSPREP00000031623297 (aa)--
Gene Model
Click here to download ENSPREG00000021416's gene model file
Pathways
Pathway IDPathway NameSource
pret03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021416's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000021416-5144.048ENSPREG00000013528-8738.496
ENSPREG00000021416-5143.452ENSPREG00000004086hnrnpaba7342.667
ENSPREG00000021416-5439.779ENSPREG00000005411hnrnpa37137.838
ENSPREG00000021416-7338.889ENSPREG00000011049dazap15438.916
ENSPREG00000021416-5233.121ENSPREG00000010619HNRNPA07532.911
ENSPREG00000021416-7588.119ENSPREG00000014574-10088.119
ENSPREG00000021416-5840.415ENSPREG00000018081hnrnpd8736.214
ENSPREG00000021416-9274.262ENSPREG00000000881msi2a9671.761
ENSPREG00000021416-5336.000ENSPREG00000010603-6736.893
ENSPREG00000021416-5038.298ENSPREG00000016071tardbpl5236.747
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000021416-9878.249ENSG00000135097MSI19987.069Homo_sapiens
ENSPREG00000021416-9882.749ENSAPOG00000023458-9882.749Acanthochromis_polyacanthus
ENSPREG00000021416-9890.663ENSAPOG00000003191MSI18797.651Acanthochromis_polyacanthus
ENSPREG00000021416-7390.769ENSAMEG00000013302MSI110067.680Ailuropoda_melanoleuca
ENSPREG00000021416-9098.246ENSACIG00000017754-7894.257Amphilophus_citrinellus
ENSPREG00000021416-9887.464ENSAOCG00000003804MSI19787.464Amphiprion_ocellaris
ENSPREG00000021416-9483.923ENSAOCG00000009031-9586.288Amphiprion_ocellaris
ENSPREG00000021416-9887.464ENSAPEG00000003245MSI19787.464Amphiprion_percula
ENSPREG00000021416-9191.284ENSAPEG00000006857-8382.749Amphiprion_percula
ENSPREG00000021416-9688.994ENSATEG00000017059MSI19588.261Anabas_testudineus
ENSPREG00000021416-9886.994ENSATEG00000023779-9786.994Anabas_testudineus
ENSPREG00000021416-9579.360ENSACAG00000002762MSI19580.233Anolis_carolinensis
ENSPREG00000021416-7678.148ENSANAG00000027901-8876.259Aotus_nancymaae
ENSPREG00000021416-9482.371ENSANAG00000027151MSI19878.249Aotus_nancymaae
ENSPREG00000021416-9584.940ENSACLG00000000117-9687.937Astatotilapia_calliptera
ENSPREG00000021416-9886.919ENSACLG00000011230MSI19786.919Astatotilapia_calliptera
ENSPREG00000021416-9489.000ENSAMXG00000038960msi17489.899Astyanax_mexicanus
ENSPREG00000021416-9485.093ENSBTAG00000009800MSI19687.419Bos_taurus
ENSPREG00000021416-9682.687ENSCJAG00000008578MSI19878.249Callithrix_jacchus
ENSPREG00000021416-9877.966ENSCAFG00000010283MSI19877.966Canis_familiaris
ENSPREG00000021416-9482.315ENSCAFG00020020585MSI110082.315Canis_lupus_dingo
ENSPREG00000021416-9579.083ENSCHIG00000024304MSI19877.591Capra_hircus
ENSPREG00000021416-9482.263ENSTSYG00000033949MSI19980.833Carlito_syrichta
ENSPREG00000021416-9481.685ENSCAPG00000003919MSI17881.685Cavia_aperea
ENSPREG00000021416-9480.352ENSCPOG00000012361MSI110082.371Cavia_porcellus
ENSPREG00000021416-9878.249ENSCCAG00000035567MSI19878.249Cebus_capucinus
ENSPREG00000021416-9581.845ENSCATG00000030019MSI19880.233Cercocebus_atys
ENSPREG00000021416-9480.352ENSCLAG00000011329MSI110082.371Chinchilla_lanigera
ENSPREG00000021416-6986.404ENSCSAG00000002265MSI18183.898Chlorocebus_sabaeus
ENSPREG00000021416-9487.781ENSCPBG00000011349MSI19290.301Chrysemys_picta_bellii
ENSPREG00000021416-9482.317ENSCANG00000040651MSI110082.317Colobus_angolensis_palliatus
ENSPREG00000021416-9878.249ENSCGRG00001018883Msi19878.249Cricetulus_griseus_chok1gshd
ENSPREG00000021416-9482.371ENSCGRG00000002191Msi18483.117Cricetulus_griseus_crigri
ENSPREG00000021416-9588.818ENSCSEG00000008352-9588.818Cynoglossus_semilaevis
ENSPREG00000021416-9486.039ENSCSEG00000011032MSI19688.514Cynoglossus_semilaevis
ENSPREG00000021416-9886.880ENSCSEG00000005834-9890.987Cynoglossus_semilaevis
ENSPREG00000021416-9590.415ENSCVAG00000009100MSI19590.415Cyprinodon_variegatus
ENSPREG00000021416-5258.268ENSCVAG00000017430zgc:1107968858.268Cyprinodon_variegatus
ENSPREG00000021416-7879.741ENSCVAG00000017463-9579.741Cyprinodon_variegatus
ENSPREG00000021416-7391.204ENSDARG00000102015CABZ01037298.19685.957Danio_rerio
ENSPREG00000021416-9490.878ENSDARG00000010710msi19990.878Danio_rerio
ENSPREG00000021416-9479.114ENSDNOG00000005713MSI19179.114Dasypus_novemcinctus
ENSPREG00000021416-9482.371ENSDORG00000005610Msi19382.371Dipodomys_ordii
ENSPREG00000021416-9479.573ENSETEG00000004756MSI110079.268Echinops_telfairi
ENSPREG00000021416-9584.404ENSEASG00005004736MSI19882.687Equus_asinus_asinus
ENSPREG00000021416-9483.939ENSECAG00000017526MSI19878.249Equus_caballus
ENSPREG00000021416-9485.358ENSELUG00000023280-9687.379Esox_lucius
ENSPREG00000021416-9975.410ENSELUG00000023219MSI18880.357Esox_lucius
ENSPREG00000021416-9682.687ENSFCAG00000011007MSI19878.249Felis_catus
ENSPREG00000021416-9485.333ENSFALG00000007574MSI110085.333Ficedula_albicollis
ENSPREG00000021416-9482.012ENSFDAG00000019586MSI110082.012Fukomys_damarensis
ENSPREG00000021416-9885.231ENSFHEG00000022446MSI19883.333Fundulus_heteroclitus
ENSPREG00000021416-9499.670ENSFHEG00000003560-9699.670Fundulus_heteroclitus
ENSPREG00000021416-9582.831ENSGMOG00000001006MSI19582.530Gadus_morhua
ENSPREG00000021416-9576.558ENSGMOG00000017838-9576.558Gadus_morhua
ENSPREG00000021416-9485.115ENSGALG00000007227MSI19674.438Gallus_gallus
ENSPREG00000021416-9276.974ENSGAFG00000005860-8977.517Gambusia_affinis
ENSPREG00000021416-9490.214ENSGAFG00000021522MSI19492.698Gambusia_affinis
ENSPREG00000021416-9579.710ENSGACG00000008674-9679.710Gasterosteus_aculeatus
ENSPREG00000021416-9885.139ENSGACG00000012679MSI19885.139Gasterosteus_aculeatus
ENSPREG00000021416-9587.025ENSGAGG00000016037MSI19587.025Gopherus_agassizii
ENSPREG00000021416-9482.166ENSGGOG00000010328MSI110082.166Gorilla_gorilla
ENSPREG00000021416-9886.919ENSHBUG00000021921MSI19786.919Haplochromis_burtoni
ENSPREG00000021416-9584.940ENSHBUG00000011841-9584.940Haplochromis_burtoni
ENSPREG00000021416-9579.480ENSHGLG00000012782MSI19877.966Heterocephalus_glaber_female
ENSPREG00000021416-9482.012ENSHGLG00100016848MSI110082.012Heterocephalus_glaber_male
ENSPREG00000021416-9493.182ENSHCOG00000012019MSI19695.946Hippocampus_comes
ENSPREG00000021416-9689.206ENSHCOG00000012067-9389.206Hippocampus_comes
ENSPREG00000021416-9489.000ENSIPUG00000001976msi19989.597Ictalurus_punctatus
ENSPREG00000021416-9482.315ENSSTOG00000009799MSI110082.315Ictidomys_tridecemlineatus
ENSPREG00000021416-9870.060ENSJJAG00000010643-9870.060Jaculus_jaculus
ENSPREG00000021416-9878.249ENSJJAG00000010463Msi19879.370Jaculus_jaculus
ENSPREG00000021416-9495.779ENSKMAG00000019877-9698.649Kryptolebias_marmoratus
ENSPREG00000021416-9882.991ENSKMAG00000011251MSI19882.991Kryptolebias_marmoratus
ENSPREG00000021416-9495.130ENSLBEG00000001375-8797.973Labrus_bergylta
ENSPREG00000021416-9590.127ENSLBEG00000008789MSI19888.235Labrus_bergylta
ENSPREG00000021416-9479.351ENSLACG00000018287MSI110081.346Latimeria_chalumnae
ENSPREG00000021416-5063.830ENSLOCG00000008618zgc:1107966659.223Lepisosteus_oculatus
ENSPREG00000021416-9078.689ENSLAFG00000009412MSI110078.361Loxodonta_africana
ENSPREG00000021416-9480.352ENSMFAG00000001798MSI110082.371Macaca_fascicularis
ENSPREG00000021416-9480.352ENSMMUG00000031527MSI19782.371Macaca_mulatta
ENSPREG00000021416-9584.404ENSMNEG00000040034MSI19882.687Macaca_nemestrina
ENSPREG00000021416-9482.317ENSMLEG00000003921MSI110082.317Mandrillus_leucophaeus
ENSPREG00000021416-9494.805ENSMAMG00000018426-9597.635Mastacembelus_armatus
ENSPREG00000021416-9584.036ENSMAMG00000002279MSI19584.036Mastacembelus_armatus
ENSPREG00000021416-9886.919ENSMZEG00005026892MSI19786.919Maylandia_zebra
ENSPREG00000021416-9590.096ENSMZEG00005000340-9590.096Maylandia_zebra
ENSPREG00000021416-6792.308ENSMGAG00000016518-10092.308Meleagris_gallopavo
ENSPREG00000021416-6887.444ENSMAUG00000016820Msi19290.995Mesocricetus_auratus
ENSPREG00000021416-9878.249ENSMICG00000033181MSI19879.083Microcebus_murinus
ENSPREG00000021416-9579.480ENSMOCG00000002286Msi19877.966Microtus_ochrogaster
ENSPREG00000021416-9483.766ENSMMOG00000010492MSI19686.149Mola_mola
ENSPREG00000021416-9497.351ENSMMOG00000012265-9997.351Mola_mola
ENSPREG00000021416-9057.831ENSMODG00000003189-10057.530Monodelphis_domestica
ENSPREG00000021416-9488.328ENSMALG00000017889MSI19590.820Monopterus_albus
ENSPREG00000021416-9494.156ENSMALG00000001426-9696.959Monopterus_albus
ENSPREG00000021416-9579.480MGP_CAROLIEiJ_G0027626Msi19889.734Mus_caroli
ENSPREG00000021416-9483.642ENSMUSG00000054256Msi19889.734Mus_musculus
ENSPREG00000021416-9582.335MGP_PahariEiJ_G0024206Msi19890.076Mus_pahari
ENSPREG00000021416-9579.480MGP_SPRETEiJ_G0028624Msi19889.734Mus_spretus
ENSPREG00000021416-9482.315ENSMPUG00000003168MSI110082.315Mustela_putorius_furo
ENSPREG00000021416-9073.512ENSMLUG00000010313MSI110073.512Myotis_lucifugus
ENSPREG00000021416-9482.371ENSNGAG00000014508Msi19182.371Nannospalax_galili
ENSPREG00000021416-8291.803ENSNBRG00000018012MSI19891.803Neolamprologus_brichardi
ENSPREG00000021416-9590.096ENSNBRG00000000841-9590.096Neolamprologus_brichardi
ENSPREG00000021416-9072.866ENSNLEG00000015636MSI110072.866Nomascus_leucogenys
ENSPREG00000021416-9463.110ENSMEUG00000015759MSI110063.110Notamacropus_eugenii
ENSPREG00000021416-9074.921ENSOPRG00000016879MSI110074.921Ochotona_princeps
ENSPREG00000021416-9482.317ENSODEG00000006328MSI110082.317Octodon_degus
ENSPREG00000021416-9884.034ENSONIG00000019452-9884.034Oreochromis_niloticus
ENSPREG00000021416-9590.400ENSONIG00000011182MSI19584.940Oreochromis_niloticus
ENSPREG00000021416-9482.637ENSOCUG00000027716MSI110082.637Oryctolagus_cuniculus
ENSPREG00000021416-9493.266ENSORLG00000019978-9393.266Oryzias_latipes
ENSPREG00000021416-9887.755ENSORLG00000029593MSI19992.027Oryzias_latipes
ENSPREG00000021416-9882.749ENSORLG00020001208-7082.749Oryzias_latipes_hni
ENSPREG00000021416-9494.304ENSORLG00020008266MSI19994.304Oryzias_latipes_hni
ENSPREG00000021416-9494.304ENSORLG00015003916MSI19994.304Oryzias_latipes_hsok
ENSPREG00000021416-9589.809ENSORLG00015013672-7487.616Oryzias_latipes_hsok
ENSPREG00000021416-9486.420ENSOMEG00000017536MSI19688.782Oryzias_melastigma
ENSPREG00000021416-9887.464ENSOMEG00000002272-9792.381Oryzias_melastigma
ENSPREG00000021416-9578.797ENSOGAG00000003847MSI19881.627Otolemur_garnettii
ENSPREG00000021416-9479.697ENSOARG00000012097MSI110079.697Ovis_aries
ENSPREG00000021416-9482.317ENSPPAG00000043073MSI110082.317Pan_paniscus
ENSPREG00000021416-9878.249ENSPPRG00000000370MSI19878.249Panthera_pardus
ENSPREG00000021416-9482.315ENSPTIG00000008913MSI110082.315Panthera_tigris_altaica
ENSPREG00000021416-9581.845ENSPTRG00000005531MSI19880.233Pan_troglodytes
ENSPREG00000021416-9877.966ENSPANG00000006335MSI19877.966Papio_anubis
ENSPREG00000021416-9583.133ENSPKIG00000023575-9881.232Paramormyrops_kingsleyae
ENSPREG00000021416-9591.054ENSPKIG00000016497MSI19591.054Paramormyrops_kingsleyae
ENSPREG00000021416-5178.070ENSPSIG00000016295-9582.857Pelodiscus_sinensis
ENSPREG00000021416-9579.758ENSPSIG00000011608-9379.758Pelodiscus_sinensis
ENSPREG00000021416-7876.754ENSPSIG00000009621-10081.579Pelodiscus_sinensis
ENSPREG00000021416-9474.419ENSPMGG00000007743-9074.419Periophthalmus_magnuspinnatus
ENSPREG00000021416-9090.169ENSPMGG00000000514MSI19792.933Periophthalmus_magnuspinnatus
ENSPREG00000021416-9481.873ENSPEMG00000010491Msi19382.067Peromyscus_maniculatus_bairdii
ENSPREG00000021416-9491.031ENSPFOG00000013113MSI19584.685Poecilia_formosa
ENSPREG00000021416-9888.338ENSPFOG00000008319-8488.338Poecilia_formosa
ENSPREG00000021416-9584.685ENSPLAG00000014025-9584.685Poecilia_latipinna
ENSPREG00000021416-9888.338ENSPLAG00000012431-9489.935Poecilia_latipinna
ENSPREG00000021416-9589.809ENSPMEG00000012796MSI19589.809Poecilia_mexicana
ENSPREG00000021416-9887.755ENSPMEG00000007025-9392.000Poecilia_mexicana
ENSPREG00000021416-9579.769ENSPPYG00000005027MSI19878.249Pongo_abelii
ENSPREG00000021416-7483.756ENSPCAG00000002300MSI17283.756Procavia_capensis
ENSPREG00000021416-9878.249ENSPCOG00000017341MSI19879.083Propithecus_coquereli
ENSPREG00000021416-9467.173ENSPVAG00000002225MSI110067.173Pteropus_vampyrus
ENSPREG00000021416-9584.940ENSPNYG00000002529-9584.940Pundamilia_nyererei
ENSPREG00000021416-9886.919ENSPNYG00000004379MSI19786.919Pundamilia_nyererei
ENSPREG00000021416-9586.709ENSPNAG00000019337msi19090.268Pygocentrus_nattereri
ENSPREG00000021416-9481.994ENSRNOG00000001156Msi110081.994Rattus_norvegicus
ENSPREG00000021416-9482.371ENSRBIG00000036889MSI110082.315Rhinopithecus_bieti
ENSPREG00000021416-9482.371ENSRROG00000041076MSI19382.371Rhinopithecus_roxellana
ENSPREG00000021416-9480.352ENSSBOG00000030259MSI19982.371Saimiri_boliviensis_boliviensis
ENSPREG00000021416-9471.569ENSSHAG00000006834MSI110071.569Sarcophilus_harrisii
ENSPREG00000021416-9491.554ENSSFOG00015014964-9589.841Scleropages_formosus
ENSPREG00000021416-9490.291ENSSFOG00015005350MSI19692.929Scleropages_formosus
ENSPREG00000021416-9492.333ENSSMAG00000018824MSI19892.617Scophthalmus_maximus
ENSPREG00000021416-9490.421ENSSMAG00000009156-8189.427Scophthalmus_maximus
ENSPREG00000021416-9883.041ENSSDUG00000001027MSI19883.041Seriola_dumerili
ENSPREG00000021416-9493.671ENSSDUG00000022697-9893.671Seriola_dumerili
ENSPREG00000021416-9493.671ENSSLDG00000018706-9893.671Seriola_lalandi_dorsalis
ENSPREG00000021416-9887.926ENSSLDG00000016832MSI19887.926Seriola_lalandi_dorsalis
ENSPREG00000021416-9582.090ENSSPUG00000015741MSI110080.466Sphenodon_punctatus
ENSPREG00000021416-9495.469ENSSPAG00000013098-9692.405Stegastes_partitus
ENSPREG00000021416-7582.199ENSSPAG00000014085-10082.199Stegastes_partitus
ENSPREG00000021416-5578.571ENSSPAG00000015573zgc:1107966094.872Stegastes_partitus
ENSPREG00000021416-9584.098ENSSSCG00000029365MSI110081.994Sus_scrofa
ENSPREG00000021416-9480.826ENSTGUG00000009534MSI110082.875Taeniopygia_guttata
ENSPREG00000021416-7292.093ENSTRUG00000016249MSI19687.607Takifugu_rubripes
ENSPREG00000021416-9490.572ENSTRUG00000015636-7990.572Takifugu_rubripes
ENSPREG00000021416-9579.701ENSTNIG00000011469MSI19579.701Tetraodon_nigroviridis
ENSPREG00000021416-9566.038ENSTNIG00000019814-9666.038Tetraodon_nigroviridis
ENSPREG00000021416-9473.358ENSTBEG00000007182MSI110073.260Tupaia_belangeri
ENSPREG00000021416-7481.509ENSTTRG00000005663MSI17884.190Tursiops_truncatus
ENSPREG00000021416-7584.793ENSUAMG00000015514MSI18591.710Ursus_americanus
ENSPREG00000021416-9483.557ENSUMAG00000006176MSI18883.557Ursus_maritimus
ENSPREG00000021416-9483.692ENSVVUG00000020993MSI19882.317Vulpes_vulpes
ENSPREG00000021416-9878.235ENSXETG00000012216msi19878.235Xenopus_tropicalis
ENSPREG00000021416-9483.117ENSXCOG00000017605MSI18985.473Xiphophorus_couchianus
ENSPREG00000021416-9496.104ENSXMAG00000018237-9096.104Xiphophorus_maculatus
ENSPREG00000021416-9489.735ENSXMAG00000027103MSI19090.268Xiphophorus_maculatus

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