EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000021470 (Gene tree)
Gene ID: 103465522
Gene Symbol: trnt1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7148 bases
Position: chrLG5:30517084-30524231
Accession: 103465522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031677	PolyA_pol	PF01743.20	4.7e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000032036	-	1278	XM_008410459	ENSPREP00000031677	425 (aa)	XP_008408681	UPI0004A249B6

Gene Model

Click here to download ENSPREG00000021470's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021470	trnt1	99	67.139	ENSG00000072756	TRNT1	96	67.139	Homo_sapiens
ENSPREG00000021470	trnt1	99	83.294	ENSAPOG00000013687	trnt1	99	83.294	Acanthochromis_polyacanthus
ENSPREG00000021470	trnt1	96	67.892	ENSAMEG00000014520	TRNT1	94	67.892	Ailuropoda_melanoleuca
ENSPREG00000021470	trnt1	99	84.471	ENSACIG00000021706	trnt1	99	84.471	Amphilophus_citrinellus
ENSPREG00000021470	trnt1	99	85.681	ENSAOCG00000024612	trnt1	99	85.681	Amphiprion_ocellaris
ENSPREG00000021470	trnt1	96	78.589	ENSAPEG00000022627	trnt1	95	78.589	Amphiprion_percula
ENSPREG00000021470	trnt1	95	86.352	ENSATEG00000008928	trnt1	99	86.352	Anabas_testudineus
ENSPREG00000021470	trnt1	90	72.513	ENSAPLG00000004258	TRNT1	95	72.513	Anas_platyrhynchos
ENSPREG00000021470	trnt1	96	67.726	ENSACAG00000005657	TRNT1	93	67.726	Anolis_carolinensis
ENSPREG00000021470	trnt1	99	66.667	ENSANAG00000024802	TRNT1	96	66.667	Aotus_nancymaae
ENSPREG00000021470	trnt1	100	81.967	ENSACLG00000022227	trnt1	100	81.967	Astatotilapia_calliptera
ENSPREG00000021470	trnt1	99	76.168	ENSAMXG00000003960	trnt1	99	76.168	Astyanax_mexicanus
ENSPREG00000021470	trnt1	99	65.721	ENSBTAG00000019534	TRNT1	96	65.721	Bos_taurus
ENSPREG00000021470	trnt1	95	42.892	WBGene00010089	hpo-31	94	42.892	Caenorhabditis_elegans
ENSPREG00000021470	trnt1	96	68.293	ENSCJAG00000015466	TRNT1	96	66.903	Callithrix_jacchus
ENSPREG00000021470	trnt1	96	68.719	ENSCAFG00000005985	TRNT1	93	68.719	Canis_familiaris
ENSPREG00000021470	trnt1	96	68.719	ENSCAFG00020014746	TRNT1	93	68.719	Canis_lupus_dingo
ENSPREG00000021470	trnt1	99	66.430	ENSCHIG00000007030	TRNT1	95	66.430	Capra_hircus
ENSPREG00000021470	trnt1	96	69.024	ENSTSYG00000013390	TRNT1	96	67.612	Carlito_syrichta
ENSPREG00000021470	trnt1	89	55.438	ENSCAPG00000006891	TRNT1	99	55.172	Cavia_aperea
ENSPREG00000021470	trnt1	99	65.957	ENSCPOG00000007849	TRNT1	96	65.957	Cavia_porcellus
ENSPREG00000021470	trnt1	94	68.579	ENSCCAG00000002919	TRNT1	98	68.957	Cebus_capucinus
ENSPREG00000021470	trnt1	96	69.024	ENSCATG00000031985	TRNT1	93	69.024	Cercocebus_atys
ENSPREG00000021470	trnt1	96	68.049	ENSCLAG00000005186	TRNT1	85	77.901	Chinchilla_lanigera
ENSPREG00000021470	trnt1	96	69.024	ENSCSAG00000011052	TRNT1	94	69.024	Chlorocebus_sabaeus
ENSPREG00000021470	trnt1	81	76.667	ENSCHOG00000005712	TRNT1	79	76.667	Choloepus_hoffmanni
ENSPREG00000021470	trnt1	96	70.098	ENSCPBG00000017636	TRNT1	93	70.098	Chrysemys_picta_bellii
ENSPREG00000021470	trnt1	95	40.741	ENSCING00000007069	-	99	40.741	Ciona_intestinalis
ENSPREG00000021470	trnt1	95	41.584	ENSCSAVG00000007494	-	95	41.584	Ciona_savignyi
ENSPREG00000021470	trnt1	96	69.268	ENSCANG00000039030	TRNT1	94	69.268	Colobus_angolensis_palliatus
ENSPREG00000021470	trnt1	96	69.024	ENSCGRG00001009998	Trnt1	94	69.024	Cricetulus_griseus_chok1gshd
ENSPREG00000021470	trnt1	96	69.024	ENSCGRG00000013410	Trnt1	87	77.717	Cricetulus_griseus_crigri
ENSPREG00000021470	trnt1	100	79.343	ENSCSEG00000008157	trnt1	100	79.343	Cynoglossus_semilaevis
ENSPREG00000021470	trnt1	99	87.500	ENSCVAG00000019770	trnt1	99	87.500	Cyprinodon_variegatus
ENSPREG00000021470	trnt1	99	77.700	ENSDARG00000075297	trnt1	99	77.700	Danio_rerio
ENSPREG00000021470	trnt1	96	69.756	ENSDNOG00000008837	TRNT1	94	69.756	Dasypus_novemcinctus
ENSPREG00000021470	trnt1	96	68.293	ENSDORG00000014035	Trnt1	94	68.293	Dipodomys_ordii
ENSPREG00000021470	trnt1	94	49.257	FBgn0037369	CG2100	83	49.257	Drosophila_melanogaster
ENSPREG00000021470	trnt1	57	72.614	ENSETEG00000018177	TRNT1	97	72.614	Echinops_telfairi
ENSPREG00000021470	trnt1	99	62.411	ENSEBUG00000012779	-	99	62.411	Eptatretus_burgeri
ENSPREG00000021470	trnt1	96	69.268	ENSEASG00005003577	TRNT1	94	69.268	Equus_asinus_asinus
ENSPREG00000021470	trnt1	96	69.512	ENSECAG00000014420	TRNT1	94	69.512	Equus_caballus
ENSPREG00000021470	trnt1	99	67.139	ENSEEUG00000009567	TRNT1	97	67.139	Erinaceus_europaeus
ENSPREG00000021470	trnt1	99	79.859	ENSELUG00000003802	trnt1	99	79.859	Esox_lucius
ENSPREG00000021470	trnt1	96	68.966	ENSFCAG00000026805	TRNT1	93	68.966	Felis_catus
ENSPREG00000021470	trnt1	90	71.728	ENSFALG00000013539	TRNT1	99	71.728	Ficedula_albicollis
ENSPREG00000021470	trnt1	99	65.957	ENSFDAG00000018412	TRNT1	96	65.957	Fukomys_damarensis
ENSPREG00000021470	trnt1	99	88.208	ENSFHEG00000019294	trnt1	99	88.208	Fundulus_heteroclitus
ENSPREG00000021470	trnt1	99	79.108	ENSGMOG00000007460	trnt1	100	79.108	Gadus_morhua
ENSPREG00000021470	trnt1	99	66.825	ENSGALG00000017368	TRNT1	97	66.825	Gallus_gallus
ENSPREG00000021470	trnt1	100	95.765	ENSGAFG00000008647	trnt1	100	95.765	Gambusia_affinis
ENSPREG00000021470	trnt1	99	82.629	ENSGACG00000011903	trnt1	99	82.629	Gasterosteus_aculeatus
ENSPREG00000021470	trnt1	96	71.324	ENSGAGG00000020942	TRNT1	93	71.324	Gopherus_agassizii
ENSPREG00000021470	trnt1	96	68.780	ENSGGOG00000015286	TRNT1	94	68.780	Gorilla_gorilla
ENSPREG00000021470	trnt1	100	82.201	ENSHBUG00000002797	trnt1	100	82.201	Haplochromis_burtoni
ENSPREG00000021470	trnt1	99	62.028	ENSHGLG00000000221	-	96	62.028	Heterocephalus_glaber_female
ENSPREG00000021470	trnt1	96	67.561	ENSHGLG00000003649	TRNT1	94	67.561	Heterocephalus_glaber_female
ENSPREG00000021470	trnt1	96	66.585	ENSHGLG00100016421	TRNT1	94	66.585	Heterocephalus_glaber_male
ENSPREG00000021470	trnt1	99	76.056	ENSHCOG00000010618	trnt1	99	76.056	Hippocampus_comes
ENSPREG00000021470	trnt1	99	75.701	ENSIPUG00000000971	trnt1	99	75.701	Ictalurus_punctatus
ENSPREG00000021470	trnt1	96	68.780	ENSSTOG00000000150	TRNT1	87	77.901	Ictidomys_tridecemlineatus
ENSPREG00000021470	trnt1	96	68.537	ENSJJAG00000018561	Trnt1	94	68.537	Jaculus_jaculus
ENSPREG00000021470	trnt1	100	83.803	ENSKMAG00000011307	trnt1	100	83.803	Kryptolebias_marmoratus
ENSPREG00000021470	trnt1	96	76.886	ENSLBEG00000019457	trnt1	97	76.886	Labrus_bergylta
ENSPREG00000021470	trnt1	98	70.843	ENSLACG00000013227	TRNT1	96	70.843	Latimeria_chalumnae
ENSPREG00000021470	trnt1	96	75.061	ENSLOCG00000011105	trnt1	94	75.061	Lepisosteus_oculatus
ENSPREG00000021470	trnt1	96	68.537	ENSLAFG00000023191	TRNT1	94	68.537	Loxodonta_africana
ENSPREG00000021470	trnt1	96	69.024	ENSMFAG00000045113	TRNT1	93	69.024	Macaca_fascicularis
ENSPREG00000021470	trnt1	96	69.024	ENSMMUG00000017983	TRNT1	93	69.024	Macaca_mulatta
ENSPREG00000021470	trnt1	96	69.024	ENSMNEG00000037805	TRNT1	93	69.024	Macaca_nemestrina
ENSPREG00000021470	trnt1	90	70.681	ENSMLEG00000033671	TRNT1	99	70.681	Mandrillus_leucophaeus
ENSPREG00000021470	trnt1	99	82.629	ENSMAMG00000023401	trnt1	99	82.629	Mastacembelus_armatus
ENSPREG00000021470	trnt1	100	81.967	ENSMZEG00005009141	trnt1	100	81.967	Maylandia_zebra
ENSPREG00000021470	trnt1	75	68.025	ENSMGAG00000009971	TRNT1	99	68.025	Meleagris_gallopavo
ENSPREG00000021470	trnt1	96	68.780	ENSMAUG00000020707	Trnt1	94	68.780	Mesocricetus_auratus
ENSPREG00000021470	trnt1	96	69.268	ENSMICG00000016615	TRNT1	94	69.268	Microcebus_murinus
ENSPREG00000021470	trnt1	96	68.780	ENSMOCG00000004539	Trnt1	94	68.780	Microtus_ochrogaster
ENSPREG00000021470	trnt1	99	80.425	ENSMMOG00000010742	trnt1	99	80.425	Mola_mola
ENSPREG00000021470	trnt1	96	68.293	ENSMODG00000004368	TRNT1	94	68.293	Monodelphis_domestica
ENSPREG00000021470	trnt1	99	79.812	ENSMALG00000008376	trnt1	99	79.812	Monopterus_albus
ENSPREG00000021470	trnt1	96	68.780	MGP_CAROLIEiJ_G0028698	Trnt1	90	73.577	Mus_caroli
ENSPREG00000021470	trnt1	96	68.537	ENSMUSG00000013736	Trnt1	84	79.006	Mus_musculus
ENSPREG00000021470	trnt1	96	70.000	MGP_PahariEiJ_G0022449	Trnt1	89	80.110	Mus_pahari
ENSPREG00000021470	trnt1	96	68.780	MGP_SPRETEiJ_G0029726	Trnt1	84	79.006	Mus_spretus
ENSPREG00000021470	trnt1	96	68.473	ENSMPUG00000017017	TRNT1	93	68.473	Mustela_putorius_furo
ENSPREG00000021470	trnt1	90	70.157	ENSMLUG00000011864	TRNT1	99	70.157	Myotis_lucifugus
ENSPREG00000021470	trnt1	96	68.293	ENSNGAG00000000537	Trnt1	94	68.293	Nannospalax_galili
ENSPREG00000021470	trnt1	81	81.792	ENSNBRG00000023606	trnt1	99	81.792	Neolamprologus_brichardi
ENSPREG00000021470	trnt1	96	69.024	ENSNLEG00000003226	TRNT1	94	69.024	Nomascus_leucogenys
ENSPREG00000021470	trnt1	96	67.805	ENSMEUG00000004684	TRNT1	94	67.805	Notamacropus_eugenii
ENSPREG00000021470	trnt1	90	66.230	ENSOPRG00000015067	TRNT1	99	66.230	Ochotona_princeps
ENSPREG00000021470	trnt1	99	66.667	ENSODEG00000007597	TRNT1	96	66.667	Octodon_degus
ENSPREG00000021470	trnt1	99	83.099	ENSONIG00000020273	trnt1	98	83.099	Oreochromis_niloticus
ENSPREG00000021470	trnt1	99	63.232	ENSOANG00000007514	TRNT1	99	63.232	Ornithorhynchus_anatinus
ENSPREG00000021470	trnt1	98	66.029	ENSOCUG00000008580	TRNT1	97	66.029	Oryctolagus_cuniculus
ENSPREG00000021470	trnt1	100	79.720	ENSORLG00000003165	trnt1	100	79.720	Oryzias_latipes
ENSPREG00000021470	trnt1	100	80.186	ENSORLG00020022060	trnt1	100	80.186	Oryzias_latipes_hni
ENSPREG00000021470	trnt1	100	79.953	ENSORLG00015018915	trnt1	99	79.953	Oryzias_latipes_hsok
ENSPREG00000021470	trnt1	100	77.176	ENSOMEG00000003331	trnt1	100	77.176	Oryzias_melastigma
ENSPREG00000021470	trnt1	99	66.430	ENSOARG00000008631	TRNT1	95	66.430	Ovis_aries
ENSPREG00000021470	trnt1	96	68.537	ENSPPAG00000043566	TRNT1	94	68.537	Pan_paniscus
ENSPREG00000021470	trnt1	96	68.719	ENSPPRG00000001327	TRNT1	93	68.719	Panthera_pardus
ENSPREG00000021470	trnt1	96	68.719	ENSPTIG00000011448	TRNT1	93	68.719	Panthera_tigris_altaica
ENSPREG00000021470	trnt1	96	68.537	ENSPTRG00000014564	TRNT1	94	68.537	Pan_troglodytes
ENSPREG00000021470	trnt1	96	69.024	ENSPANG00000025944	TRNT1	93	69.024	Papio_anubis
ENSPREG00000021470	trnt1	99	75.000	ENSPKIG00000020015	trnt1	99	75.000	Paramormyrops_kingsleyae
ENSPREG00000021470	trnt1	93	70.886	ENSPSIG00000017356	TRNT1	99	71.667	Pelodiscus_sinensis
ENSPREG00000021470	trnt1	99	77.700	ENSPMGG00000008888	trnt1	98	77.700	Periophthalmus_magnuspinnatus
ENSPREG00000021470	trnt1	96	68.780	ENSPEMG00000019845	Trnt1	94	68.780	Peromyscus_maniculatus_bairdii
ENSPREG00000021470	trnt1	96	69.024	ENSPCIG00000030436	TRNT1	94	69.024	Phascolarctos_cinereus
ENSPREG00000021470	trnt1	99	98.578	ENSPFOG00000006194	trnt1	99	98.578	Poecilia_formosa
ENSPREG00000021470	trnt1	99	98.341	ENSPLAG00000015623	trnt1	100	98.762	Poecilia_latipinna
ENSPREG00000021470	trnt1	100	97.882	ENSPMEG00000012216	trnt1	100	98.020	Poecilia_mexicana
ENSPREG00000021470	trnt1	96	68.537	ENSPPYG00000013702	TRNT1	94	68.537	Pongo_abelii
ENSPREG00000021470	trnt1	90	70.681	ENSPCAG00000001951	TRNT1	99	70.681	Procavia_capensis
ENSPREG00000021470	trnt1	96	68.537	ENSPCOG00000022228	TRNT1	94	68.537	Propithecus_coquereli
ENSPREG00000021470	trnt1	90	69.634	ENSPVAG00000008784	TRNT1	99	69.634	Pteropus_vampyrus
ENSPREG00000021470	trnt1	100	81.733	ENSPNYG00000003120	trnt1	100	81.733	Pundamilia_nyererei
ENSPREG00000021470	trnt1	99	76.869	ENSPNAG00000000565	trnt1	99	76.869	Pygocentrus_nattereri
ENSPREG00000021470	trnt1	96	69.268	ENSRNOG00000006432	Trnt1	94	69.268	Rattus_norvegicus
ENSPREG00000021470	trnt1	96	68.049	ENSRBIG00000042632	TRNT1	94	68.049	Rhinopithecus_bieti
ENSPREG00000021470	trnt1	96	69.024	ENSRROG00000036866	TRNT1	94	69.024	Rhinopithecus_roxellana
ENSPREG00000021470	trnt1	99	66.903	ENSSBOG00000021208	TRNT1	96	66.903	Saimiri_boliviensis_boliviensis
ENSPREG00000021470	trnt1	96	67.561	ENSSHAG00000018861	TRNT1	94	67.561	Sarcophilus_harrisii
ENSPREG00000021470	trnt1	99	74.126	ENSSFOG00015020844	trnt1	99	74.126	Scleropages_formosus
ENSPREG00000021470	trnt1	99	82.864	ENSSMAG00000015432	trnt1	98	82.864	Scophthalmus_maximus
ENSPREG00000021470	trnt1	99	83.333	ENSSDUG00000012320	trnt1	100	83.333	Seriola_dumerili
ENSPREG00000021470	trnt1	57	82.158	ENSSLDG00000016463	-	91	82.427	Seriola_lalandi_dorsalis
ENSPREG00000021470	trnt1	99	83.099	ENSSLDG00000009325	trnt1	100	83.099	Seriola_lalandi_dorsalis
ENSPREG00000021470	trnt1	90	71.728	ENSSPUG00000014153	TRNT1	99	71.728	Sphenodon_punctatus
ENSPREG00000021470	trnt1	99	83.099	ENSSPAG00000021005	trnt1	99	83.099	Stegastes_partitus
ENSPREG00000021470	trnt1	96	68.719	ENSSSCG00000011529	TRNT1	94	68.719	Sus_scrofa
ENSPREG00000021470	trnt1	95	70.297	ENSTGUG00000010192	TRNT1	99	70.297	Taeniopygia_guttata
ENSPREG00000021470	trnt1	99	80.282	ENSTRUG00000001088	trnt1	99	80.282	Takifugu_rubripes
ENSPREG00000021470	trnt1	99	79.812	ENSTNIG00000007363	trnt1	98	79.812	Tetraodon_nigroviridis
ENSPREG00000021470	trnt1	58	59.184	ENSTBEG00000006367	TRNT1	81	59.184	Tupaia_belangeri
ENSPREG00000021470	trnt1	99	66.430	ENSTTRG00000007803	TRNT1	96	66.430	Tursiops_truncatus
ENSPREG00000021470	trnt1	96	68.473	ENSUAMG00000022574	TRNT1	93	68.473	Ursus_americanus
ENSPREG00000021470	trnt1	96	68.227	ENSUMAG00000024092	TRNT1	93	68.227	Ursus_maritimus
ENSPREG00000021470	trnt1	96	68.719	ENSVVUG00000012810	TRNT1	93	68.719	Vulpes_vulpes
ENSPREG00000021470	trnt1	98	61.667	ENSXETG00000025091	trnt1	99	62.935	Xenopus_tropicalis
ENSPREG00000021470	trnt1	100	94.824	ENSXCOG00000010150	trnt1	100	94.824	Xiphophorus_couchianus
ENSPREG00000021470	trnt1	100	95.765	ENSXMAG00000002227	trnt1	100	95.765	Xiphophorus_maculatus