EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000021498 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 17457 bases
Position: chrLG5:1027581-1045037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031736	KH_1	PF00013.29	3.3e-32	1	2
ENSPREP00000031736	KH_1	PF00013.29	3.3e-32	2	2
ENSPREP00000031736	KH_2	PF07650.17	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000032095	-	855	-	ENSPREP00000031736	284 (aa)	-	-

Gene Model

Click here to download ENSPREG00000021498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021498's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000021498	-	68	59.524	ENSPREG00000007742	PCBP2	92	51.440
ENSPREG00000021498	-	81	51.292	ENSPREG00000015736	pcbp3	88	51.292
ENSPREG00000021498	-	71	55.656	ENSPREG00000006202	pcbp2	92	55.656
ENSPREG00000021498	-	75	60.595	ENSPREG00000017370	-	74	60.595
ENSPREG00000021498	-	72	62.937	ENSPREG00000020585	-	82	62.937
ENSPREG00000021498	-	68	71.681	ENSPREG00000001797	zgc:110045	76	71.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021498	-	80	58.462	ENSG00000090097	PCBP4	89	58.462	Homo_sapiens
ENSPREG00000021498	-	52	78.710	ENSAPOG00000018462	-	68	78.710	Acanthochromis_polyacanthus
ENSPREG00000021498	-	81	56.997	ENSAPOG00000009897	-	78	56.997	Acanthochromis_polyacanthus
ENSPREG00000021498	-	82	52.963	ENSAMEG00000009211	PCBP4	67	52.963	Ailuropoda_melanoleuca
ENSPREG00000021498	-	67	98.214	ENSACIG00000015264	pcbp4	59	98.214	Amphilophus_citrinellus
ENSPREG00000021498	-	81	57.679	ENSACIG00000020434	-	72	57.679	Amphilophus_citrinellus
ENSPREG00000021498	-	71	72.845	ENSAOCG00000006924	-	72	72.845	Amphiprion_ocellaris
ENSPREG00000021498	-	75	58.696	ENSAOCG00000021366	-	74	58.696	Amphiprion_ocellaris
ENSPREG00000021498	-	81	96.429	ENSAPEG00000023157	pcbp4	57	96.429	Amphiprion_percula
ENSPREG00000021498	-	75	54.340	ENSAPEG00000009555	-	60	73.611	Amphiprion_percula
ENSPREG00000021498	-	75	59.058	ENSATEG00000006511	-	72	59.058	Anabas_testudineus
ENSPREG00000021498	-	71	70.168	ENSATEG00000008529	pcbp4	57	70.168	Anabas_testudineus
ENSPREG00000021498	-	75	54.331	ENSACAG00000011701	PCBP4	72	54.331	Anolis_carolinensis
ENSPREG00000021498	-	82	52.963	ENSANAG00000023072	PCBP4	67	52.963	Aotus_nancymaae
ENSPREG00000021498	-	81	96.429	ENSACLG00000013348	pcbp4	54	96.429	Astatotilapia_calliptera
ENSPREG00000021498	-	81	91.071	ENSACLG00000025246	-	69	57.679	Astatotilapia_calliptera
ENSPREG00000021498	-	81	92.857	ENSAMXG00000033125	pcbp4	52	92.857	Astyanax_mexicanus
ENSPREG00000021498	-	83	53.137	ENSBTAG00000018622	PCBP4	84	53.137	Bos_taurus
ENSPREG00000021498	-	85	54.826	ENSCJAG00000005783	PCBP4	67	54.826	Callithrix_jacchus
ENSPREG00000021498	-	82	52.963	ENSCAFG00000010019	PCBP4	67	52.963	Canis_familiaris
ENSPREG00000021498	-	82	52.963	ENSCAFG00020022361	PCBP4	67	52.963	Canis_lupus_dingo
ENSPREG00000021498	-	84	52.555	ENSCHIG00000012918	PCBP4	69	52.555	Capra_hircus
ENSPREG00000021498	-	82	52.963	ENSTSYG00000008765	PCBP4	68	52.963	Carlito_syrichta
ENSPREG00000021498	-	82	52.593	ENSCAPG00000005895	PCBP4	67	52.593	Cavia_aperea
ENSPREG00000021498	-	82	52.593	ENSCPOG00000014617	PCBP4	67	52.593	Cavia_porcellus
ENSPREG00000021498	-	82	57.143	ENSCCAG00000033268	PCBP4	66	57.143	Cebus_capucinus
ENSPREG00000021498	-	84	52.555	ENSCATG00000032034	PCBP4	68	52.555	Cercocebus_atys
ENSPREG00000021498	-	84	52.555	ENSCLAG00000008356	PCBP4	68	52.555	Chinchilla_lanigera
ENSPREG00000021498	-	82	52.963	ENSCSAG00000013913	PCBP4	67	52.963	Chlorocebus_sabaeus
ENSPREG00000021498	-	82	56.757	ENSCPBG00000016554	PCBP4	68	56.757	Chrysemys_picta_bellii
ENSPREG00000021498	-	84	52.555	ENSCANG00000038865	PCBP4	68	52.555	Colobus_angolensis_palliatus
ENSPREG00000021498	-	82	52.963	ENSCGRG00001014953	Pcbp4	68	52.963	Cricetulus_griseus_chok1gshd
ENSPREG00000021498	-	82	52.963	ENSCGRG00000008617	Pcbp4	68	52.963	Cricetulus_griseus_crigri
ENSPREG00000021498	-	75	55.797	ENSCSEG00000021041	PCBP4	63	55.797	Cynoglossus_semilaevis
ENSPREG00000021498	-	81	92.857	ENSCSEG00000014487	pcbp4	64	58.446	Cynoglossus_semilaevis
ENSPREG00000021498	-	75	70.395	ENSCVAG00000013090	-	69	57.338	Cyprinodon_variegatus
ENSPREG00000021498	-	75	75.314	ENSCVAG00000003674	pcbp4	69	75.314	Cyprinodon_variegatus
ENSPREG00000021498	-	81	92.857	ENSDARG00000024276	pcbp4	75	92.982	Danio_rerio
ENSPREG00000021498	-	62	33.186	ENSDNOG00000033951	PCBP4	60	34.071	Dasypus_novemcinctus
ENSPREG00000021498	-	82	50.741	ENSDORG00000000573	Pcbp4	72	52.222	Dipodomys_ordii
ENSPREG00000021498	-	75	50.000	ENSETEG00000001778	PCBP4	92	50.000	Echinops_telfairi
ENSPREG00000021498	-	82	52.593	ENSEASG00005012889	PCBP4	67	52.593	Equus_asinus_asinus
ENSPREG00000021498	-	82	52.593	ENSECAG00000024218	PCBP4	67	52.593	Equus_caballus
ENSPREG00000021498	-	81	91.071	ENSELUG00000001870	-	54	91.071	Esox_lucius
ENSPREG00000021498	-	81	92.857	ENSELUG00000018204	pcbp4	84	59.655	Esox_lucius
ENSPREG00000021498	-	82	52.963	ENSFCAG00000009148	PCBP4	67	52.963	Felis_catus
ENSPREG00000021498	-	82	52.555	ENSFALG00000008831	PCBP4	71	52.555	Ficedula_albicollis
ENSPREG00000021498	-	75	55.600	ENSFDAG00000012692	PCBP4	100	51.786	Fukomys_damarensis
ENSPREG00000021498	-	75	51.709	ENSFHEG00000002769	-	61	51.709	Fundulus_heteroclitus
ENSPREG00000021498	-	81	55.631	ENSGMOG00000017799	-	71	55.631	Gadus_morhua
ENSPREG00000021498	-	90	50.923	ENSGALG00000027695	PCBP4	70	50.923	Gallus_gallus
ENSPREG00000021498	-	56	79.394	ENSGAFG00000018301	pcbp4	69	79.394	Gambusia_affinis
ENSPREG00000021498	-	81	91.071	ENSGAFG00000021090	-	53	91.071	Gambusia_affinis
ENSPREG00000021498	-	81	60.000	ENSGACG00000002664	-	69	60.000	Gasterosteus_aculeatus
ENSPREG00000021498	-	82	56.757	ENSGAGG00000022116	PCBP4	68	56.757	Gopherus_agassizii
ENSPREG00000021498	-	84	52.045	ENSGGOG00000012474	PCBP4	68	52.045	Gorilla_gorilla
ENSPREG00000021498	-	81	57.679	ENSHBUG00000005329	-	69	57.679	Haplochromis_burtoni
ENSPREG00000021498	-	81	96.429	ENSHBUG00000009472	pcbp4	54	96.429	Haplochromis_burtoni
ENSPREG00000021498	-	84	52.536	ENSHGLG00000012018	PCBP4	68	52.536	Heterocephalus_glaber_female
ENSPREG00000021498	-	84	52.158	ENSHGLG00100008748	PCBP4	68	52.158	Heterocephalus_glaber_male
ENSPREG00000021498	-	84	67.623	ENSHCOG00000010838	-	68	67.623	Hippocampus_comes
ENSPREG00000021498	-	81	74.684	ENSIPUG00000008212	pcbp4	62	71.674	Ictalurus_punctatus
ENSPREG00000021498	-	83	53.137	ENSSTOG00000002573	PCBP4	82	53.137	Ictidomys_tridecemlineatus
ENSPREG00000021498	-	82	52.963	ENSJJAG00000016235	Pcbp4	68	52.963	Jaculus_jaculus
ENSPREG00000021498	-	81	98.214	ENSKMAG00000014252	pcbp4	54	98.214	Kryptolebias_marmoratus
ENSPREG00000021498	-	76	65.462	ENSKMAG00000017554	-	83	65.462	Kryptolebias_marmoratus
ENSPREG00000021498	-	81	58.020	ENSLBEG00000011345	-	69	58.020	Labrus_bergylta
ENSPREG00000021498	-	78	66.879	ENSLACG00000015899	PCBP4	85	66.879	Latimeria_chalumnae
ENSPREG00000021498	-	81	91.071	ENSLOCG00000013402	pcbp4	57	91.071	Lepisosteus_oculatus
ENSPREG00000021498	-	75	55.600	ENSLAFG00000010732	PCBP4	70	55.600	Loxodonta_africana
ENSPREG00000021498	-	84	52.555	ENSMFAG00000001431	PCBP4	68	52.555	Macaca_fascicularis
ENSPREG00000021498	-	84	52.555	ENSMMUG00000022205	PCBP4	84	53.160	Macaca_mulatta
ENSPREG00000021498	-	84	52.555	ENSMNEG00000028553	PCBP4	68	52.555	Macaca_nemestrina
ENSPREG00000021498	-	84	52.555	ENSMLEG00000027083	PCBP4	68	52.555	Mandrillus_leucophaeus
ENSPREG00000021498	-	81	94.643	ENSMAMG00000010163	pcbp4	52	94.643	Mastacembelus_armatus
ENSPREG00000021498	-	81	58.219	ENSMAMG00000011364	-	69	57.679	Mastacembelus_armatus
ENSPREG00000021498	-	81	96.429	ENSMZEG00005008852	pcbp4	55	96.429	Maylandia_zebra
ENSPREG00000021498	-	81	91.071	ENSMZEG00005023631	-	69	57.679	Maylandia_zebra
ENSPREG00000021498	-	79	58.599	ENSMGAG00000005091	-	82	58.599	Meleagris_gallopavo
ENSPREG00000021498	-	61	46.535	ENSMGAG00000003895	-	51	46.535	Meleagris_gallopavo
ENSPREG00000021498	-	82	52.963	ENSMAUG00000021064	Pcbp4	67	52.963	Mesocricetus_auratus
ENSPREG00000021498	-	85	52.158	ENSMICG00000002686	PCBP4	69	52.158	Microcebus_murinus
ENSPREG00000021498	-	82	54.753	ENSMOCG00000013557	Pcbp4	66	54.753	Microtus_ochrogaster
ENSPREG00000021498	-	76	64.800	ENSMMOG00000017756	pcbp4	85	64.800	Mola_mola
ENSPREG00000021498	-	82	53.704	ENSMODG00000011790	PCBP4	60	53.704	Monodelphis_domestica
ENSPREG00000021498	-	75	58.696	ENSMALG00000022117	-	67	62.500	Monopterus_albus
ENSPREG00000021498	-	81	96.429	ENSMALG00000020318	pcbp4	55	96.429	Monopterus_albus
ENSPREG00000021498	-	80	62.500	MGP_CAROLIEiJ_G0032623	Pcbp4	91	62.500	Mus_caroli
ENSPREG00000021498	-	80	62.500	ENSMUSG00000023495	Pcbp4	91	62.500	Mus_musculus
ENSPREG00000021498	-	80	62.500	MGP_PahariEiJ_G0015491	Pcbp4	91	62.500	Mus_pahari
ENSPREG00000021498	-	80	62.500	MGP_SPRETEiJ_G0033768	-	91	62.500	Mus_spretus
ENSPREG00000021498	-	82	52.963	ENSMPUG00000011766	PCBP4	67	52.963	Mustela_putorius_furo
ENSPREG00000021498	-	82	52.963	ENSNGAG00000013148	Pcbp4	67	59.459	Nannospalax_galili
ENSPREG00000021498	-	75	59.058	ENSNBRG00000015885	-	64	59.058	Neolamprologus_brichardi
ENSPREG00000021498	-	82	52.963	ENSNLEG00000007064	PCBP4	67	52.963	Nomascus_leucogenys
ENSPREG00000021498	-	75	50.735	ENSMEUG00000006917	PCBP4	68	50.735	Notamacropus_eugenii
ENSPREG00000021498	-	75	48.264	ENSOPRG00000008763	PCBP4	71	48.264	Ochotona_princeps
ENSPREG00000021498	-	82	52.593	ENSODEG00000018230	PCBP4	67	52.593	Octodon_degus
ENSPREG00000021498	-	82	56.471	ENSOANG00000014110	PCBP4	68	59.574	Ornithorhynchus_anatinus
ENSPREG00000021498	-	82	52.963	ENSOCUG00000025336	PCBP4	67	52.963	Oryctolagus_cuniculus
ENSPREG00000021498	-	71	91.071	ENSORLG00000009899	-	52	91.071	Oryzias_latipes
ENSPREG00000021498	-	81	54.138	ENSORLG00000003061	pcbp4	67	54.138	Oryzias_latipes
ENSPREG00000021498	-	75	70.395	ENSORLG00020001183	-	73	57.338	Oryzias_latipes_hni
ENSPREG00000021498	-	81	72.574	ENSORLG00015019262	pcbp4	59	72.574	Oryzias_latipes_hsok
ENSPREG00000021498	-	81	57.338	ENSORLG00015017819	-	73	57.338	Oryzias_latipes_hsok
ENSPREG00000021498	-	81	57.338	ENSOMEG00000011545	-	69	57.338	Oryzias_melastigma
ENSPREG00000021498	-	81	61.278	ENSOMEG00000003516	-	71	63.095	Oryzias_melastigma
ENSPREG00000021498	-	82	52.963	ENSOGAG00000032384	PCBP4	67	52.963	Otolemur_garnettii
ENSPREG00000021498	-	82	52.963	ENSOARG00000006603	PCBP4	74	52.963	Ovis_aries
ENSPREG00000021498	-	84	54.647	ENSPPAG00000038764	PCBP4	68	54.647	Pan_paniscus
ENSPREG00000021498	-	82	52.963	ENSPPRG00000006165	PCBP4	67	52.963	Panthera_pardus
ENSPREG00000021498	-	82	52.963	ENSPTIG00000005401	PCBP4	64	52.963	Panthera_tigris_altaica
ENSPREG00000021498	-	84	54.647	ENSPTRG00000014983	PCBP4	68	54.647	Pan_troglodytes
ENSPREG00000021498	-	84	52.555	ENSPANG00000026222	PCBP4	68	52.555	Papio_anubis
ENSPREG00000021498	-	81	72.152	ENSPKIG00000010244	pcbp4	58	72.152	Paramormyrops_kingsleyae
ENSPREG00000021498	-	81	46.918	ENSPKIG00000005487	-	70	46.918	Paramormyrops_kingsleyae
ENSPREG00000021498	-	75	71.429	ENSPSIG00000011286	PCBP4	94	50.186	Pelodiscus_sinensis
ENSPREG00000021498	-	71	89.286	ENSPMGG00000022732	-	57	89.286	Periophthalmus_magnuspinnatus
ENSPREG00000021498	-	81	64.599	ENSPMGG00000000063	pcbp4	69	64.599	Periophthalmus_magnuspinnatus
ENSPREG00000021498	-	84	52.555	ENSPEMG00000009276	Pcbp4	68	52.555	Peromyscus_maniculatus_bairdii
ENSPREG00000021498	-	82	54.074	ENSPCIG00000018151	PCBP4	72	53.333	Phascolarctos_cinereus
ENSPREG00000021498	-	81	57.679	ENSPFOG00000002989	-	69	57.679	Poecilia_formosa
ENSPREG00000021498	-	68	100.000	ENSPFOG00000014474	pcbp4	92	100.000	Poecilia_formosa
ENSPREG00000021498	-	75	60.769	ENSPLAG00000011438	-	64	60.769	Poecilia_latipinna
ENSPREG00000021498	-	91	63.226	ENSPLAG00000023316	pcbp4	69	63.226	Poecilia_latipinna
ENSPREG00000021498	-	82	52.963	ENSPPYG00000013822	PCBP4	67	52.963	Pongo_abelii
ENSPREG00000021498	-	75	49.466	ENSPCAG00000009515	PCBP4	70	49.466	Procavia_capensis
ENSPREG00000021498	-	86	52.688	ENSPCOG00000027535	PCBP4	67	52.963	Propithecus_coquereli
ENSPREG00000021498	-	75	45.847	ENSPVAG00000012474	PCBP4	72	45.847	Pteropus_vampyrus
ENSPREG00000021498	-	80	96.429	ENSPNYG00000019234	pcbp4	57	96.429	Pundamilia_nyererei
ENSPREG00000021498	-	75	59.058	ENSPNYG00000003098	-	64	59.058	Pundamilia_nyererei
ENSPREG00000021498	-	81	92.857	ENSPNAG00000025434	pcbp4	53	92.857	Pygocentrus_nattereri
ENSPREG00000021498	-	82	52.963	ENSRNOG00000012406	Pcbp4	67	52.963	Rattus_norvegicus
ENSPREG00000021498	-	84	52.555	ENSRBIG00000043793	PCBP4	68	52.555	Rhinopithecus_bieti
ENSPREG00000021498	-	84	52.555	ENSRROG00000034589	PCBP4	68	52.555	Rhinopithecus_roxellana
ENSPREG00000021498	-	85	56.180	ENSSBOG00000027029	PCBP4	68	56.180	Saimiri_boliviensis_boliviensis
ENSPREG00000021498	-	73	65.972	ENSSHAG00000007362	PCBP4	75	65.972	Sarcophilus_harrisii
ENSPREG00000021498	-	81	83.929	ENSSFOG00015012075	PCBP4	58	83.929	Scleropages_formosus
ENSPREG00000021498	-	81	89.286	ENSSMAG00000009392	-	53	89.286	Scophthalmus_maximus
ENSPREG00000021498	-	81	94.643	ENSSMAG00000005827	pcbp4	55	94.643	Scophthalmus_maximus
ENSPREG00000021498	-	76	98.214	ENSSDUG00000017719	pcbp4	59	98.214	Seriola_dumerili
ENSPREG00000021498	-	75	59.058	ENSSDUG00000015540	-	74	59.058	Seriola_dumerili
ENSPREG00000021498	-	52	65.359	ENSSLDG00000024847	-	62	82.979	Seriola_lalandi_dorsalis
ENSPREG00000021498	-	75	59.058	ENSSLDG00000007851	-	74	59.058	Seriola_lalandi_dorsalis
ENSPREG00000021498	-	82	58.635	ENSSPUG00000000194	PCBP4	64	58.635	Sphenodon_punctatus
ENSPREG00000021498	-	66	63.333	ENSSPAG00000019058	-	60	63.713	Stegastes_partitus
ENSPREG00000021498	-	81	57.338	ENSSPAG00000003033	-	78	57.338	Stegastes_partitus
ENSPREG00000021498	-	82	52.963	ENSSSCG00000028446	PCBP4	67	52.963	Sus_scrofa
ENSPREG00000021498	-	82	45.588	ENSTGUG00000006393	PCBP4	95	45.588	Taeniopygia_guttata
ENSPREG00000021498	-	73	91.071	ENSTRUG00000007426	-	51	91.071	Takifugu_rubripes
ENSPREG00000021498	-	81	60.448	ENSTNIG00000017887	-	70	60.448	Tetraodon_nigroviridis
ENSPREG00000021498	-	58	67.857	ENSTTRG00000001443	PCBP4	52	67.857	Tursiops_truncatus
ENSPREG00000021498	-	84	50.000	ENSUAMG00000020871	PCBP4	69	59.375	Ursus_americanus
ENSPREG00000021498	-	82	52.963	ENSUMAG00000021609	PCBP4	67	52.963	Ursus_maritimus
ENSPREG00000021498	-	82	52.963	ENSVVUG00000026857	PCBP4	67	52.963	Vulpes_vulpes
ENSPREG00000021498	-	68	76.238	ENSXCOG00000000111	-	93	76.238	Xiphophorus_couchianus
ENSPREG00000021498	-	56	81.818	ENSXCOG00000017325	pcbp4	70	81.818	Xiphophorus_couchianus
ENSPREG00000021498	-	81	57.679	ENSXMAG00000024530	-	69	57.679	Xiphophorus_maculatus
ENSPREG00000021498	-	81	100.000	ENSXMAG00000015709	pcbp4	53	100.000	Xiphophorus_maculatus
ENSPREG00000021498	-	68	53.386	ENSXMAG00000022188	-	55	53.386	Xiphophorus_maculatus