EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000021538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 13147 bases
Position: chrLG1:27247630-27260776
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000031800	FAM83	PF07894.12	6.9e-69	1	2
ENSPREP00000031800	FAM83	PF07894.12	6.9e-69	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000032159	-	1254	-	ENSPREP00000031800	417 (aa)	-	-

Gene Model

Click here to download ENSPREG00000021538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000021538	-	62	30.986	ENSPREG00000021668	fam83c	52	33.451
ENSPREG00000021538	-	65	32.776	ENSPREG00000000170	fam83fb	58	32.776
ENSPREG00000021538	-	57	37.052	ENSPREG00000012779	fam83fa	55	38.462
ENSPREG00000021538	-	61	35.816	ENSPREG00000022272	fam83d	52	35.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021538	-	100	61.050	ENSAPEG00000010819	-	100	61.050	Amphiprion_percula
ENSPREG00000021538	-	64	63.469	ENSATEG00000021763	-	80	63.469	Anabas_testudineus
ENSPREG00000021538	-	65	36.275	ENSEBUG00000000653	-	56	36.275	Eptatretus_burgeri
ENSPREG00000021538	-	63	46.367	ENSGMOG00000005524	fam83b	92	46.792	Gadus_morhua
ENSPREG00000021538	-	63	59.717	ENSGMOG00000007616	-	99	59.717	Gadus_morhua
ENSPREG00000021538	-	83	54.570	ENSNBRG00000004865	-	81	54.570	Neolamprologus_brichardi
ENSPREG00000021538	-	77	56.083	ENSORLG00015021055	-	65	56.056	Oryzias_latipes_hsok
ENSPREG00000021538	-	72	57.500	ENSOMEG00000010956	-	85	57.500	Oryzias_melastigma
ENSPREG00000021538	-	80	85.630	ENSPLAG00000023353	-	72	85.630	Poecilia_latipinna
ENSPREG00000021538	-	61	61.957	ENSTNIG00000003270	-	100	61.957	Tetraodon_nigroviridis