EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000021797 (Gene tree)
Gene ID: 103473403
Gene Symbol: ptcd2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4197 bases
Position: chrLG12:8175327-8179523
Accession: 103473403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000032169	MRP-S27	PF10037.9	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000032532	-	1176	XM_008423631	ENSPREP00000032169	391 (aa)	XP_008421853	-

Gene Model

Click here to download ENSPREG00000021797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021797	ptcd2	88	44.253	ENSG00000049883	PTCD2	100	39.394	Homo_sapiens
ENSPREG00000021797	ptcd2	97	74.211	ENSAPOG00000020682	ptcd2	99	74.211	Acanthochromis_polyacanthus
ENSPREG00000021797	ptcd2	88	43.391	ENSAMEG00000007194	PTCD2	90	43.391	Ailuropoda_melanoleuca
ENSPREG00000021797	ptcd2	88	67.241	ENSACIG00000002053	ptcd2	100	67.241	Amphilophus_citrinellus
ENSPREG00000021797	ptcd2	97	75.789	ENSAOCG00000006616	ptcd2	98	75.789	Amphiprion_ocellaris
ENSPREG00000021797	ptcd2	97	75.789	ENSAPEG00000022926	ptcd2	98	75.789	Amphiprion_percula
ENSPREG00000021797	ptcd2	88	48.127	ENSACAG00000009747	PTCD2	89	48.127	Anolis_carolinensis
ENSPREG00000021797	ptcd2	88	43.391	ENSANAG00000029353	PTCD2	90	43.391	Aotus_nancymaae
ENSPREG00000021797	ptcd2	99	74.742	ENSACLG00000027742	ptcd2	99	74.742	Astatotilapia_calliptera
ENSPREG00000021797	ptcd2	88	50.289	ENSAMXG00000029404	ptcd2	92	50.289	Astyanax_mexicanus
ENSPREG00000021797	ptcd2	88	44.828	ENSBTAG00000014675	PTCD2	91	44.828	Bos_taurus
ENSPREG00000021797	ptcd2	88	42.816	ENSCJAG00000016364	PTCD2	90	42.816	Callithrix_jacchus
ENSPREG00000021797	ptcd2	88	46.552	ENSCAFG00000007982	PTCD2	82	46.552	Canis_familiaris
ENSPREG00000021797	ptcd2	88	46.532	ENSCAFG00020019147	PTCD2	97	46.532	Canis_lupus_dingo
ENSPREG00000021797	ptcd2	88	45.402	ENSCHIG00000017118	PTCD2	91	45.402	Capra_hircus
ENSPREG00000021797	ptcd2	91	42.318	ENSCPOG00000040168	PTCD2	97	42.318	Cavia_porcellus
ENSPREG00000021797	ptcd2	70	45.985	ENSCCAG00000021996	-	84	45.985	Cebus_capucinus
ENSPREG00000021797	ptcd2	88	43.678	ENSCCAG00000029389	-	90	43.678	Cebus_capucinus
ENSPREG00000021797	ptcd2	95	44.385	ENSCATG00000019069	PTCD2	98	44.385	Cercocebus_atys
ENSPREG00000021797	ptcd2	88	43.103	ENSCLAG00000000072	PTCD2	91	43.103	Chinchilla_lanigera
ENSPREG00000021797	ptcd2	88	45.115	ENSCSAG00000015623	PTCD2	98	44.267	Chlorocebus_sabaeus
ENSPREG00000021797	ptcd2	68	50.588	ENSCHOG00000010634	PTCD2	77	50.588	Choloepus_hoffmanni
ENSPREG00000021797	ptcd2	88	46.705	ENSCPBG00000000216	PTCD2	89	46.705	Chrysemys_picta_bellii
ENSPREG00000021797	ptcd2	95	44.533	ENSCANG00000035636	PTCD2	96	44.533	Colobus_angolensis_palliatus
ENSPREG00000021797	ptcd2	91	44.687	ENSCGRG00001015289	Ptcd2	80	44.687	Cricetulus_griseus_chok1gshd
ENSPREG00000021797	ptcd2	91	44.687	ENSCGRG00000006193	Ptcd2	80	44.687	Cricetulus_griseus_crigri
ENSPREG00000021797	ptcd2	99	81.701	ENSCVAG00000001285	ptcd2	99	81.701	Cyprinodon_variegatus
ENSPREG00000021797	ptcd2	92	51.781	ENSDARG00000035391	ptcd2	95	51.781	Danio_rerio
ENSPREG00000021797	ptcd2	88	46.991	ENSDNOG00000008719	PTCD2	91	46.991	Dasypus_novemcinctus
ENSPREG00000021797	ptcd2	92	44.628	ENSDORG00000004921	Ptcd2	93	44.628	Dipodomys_ordii
ENSPREG00000021797	ptcd2	96	39.487	ENSETEG00000016542	PTCD2	100	39.487	Echinops_telfairi
ENSPREG00000021797	ptcd2	93	43.767	ENSEASG00005018038	PTCD2	99	43.767	Equus_asinus_asinus
ENSPREG00000021797	ptcd2	88	45.115	ENSECAG00000007022	PTCD2	90	45.115	Equus_caballus
ENSPREG00000021797	ptcd2	92	43.175	ENSEEUG00000014031	PTCD2	92	43.175	Erinaceus_europaeus
ENSPREG00000021797	ptcd2	93	59.290	ENSELUG00000003584	ptcd2	96	59.290	Esox_lucius
ENSPREG00000021797	ptcd2	80	45.079	ENSFCAG00000045432	PTCD2	74	45.079	Felis_catus
ENSPREG00000021797	ptcd2	77	43.522	ENSFALG00000010299	PTCD2	92	43.522	Ficedula_albicollis
ENSPREG00000021797	ptcd2	90	42.817	ENSFDAG00000018461	PTCD2	93	42.817	Fukomys_damarensis
ENSPREG00000021797	ptcd2	98	60.881	ENSGMOG00000003637	ptcd2	100	60.881	Gadus_morhua
ENSPREG00000021797	ptcd2	88	42.651	ENSGALG00000038260	PTCD2	99	40.897	Gallus_gallus
ENSPREG00000021797	ptcd2	88	49.856	ENSGAGG00000021952	PTCD2	89	49.856	Gopherus_agassizii
ENSPREG00000021797	ptcd2	88	44.253	ENSGGOG00000010695	PTCD2	90	44.253	Gorilla_gorilla
ENSPREG00000021797	ptcd2	99	73.711	ENSHBUG00000009191	ptcd2	99	73.711	Haplochromis_burtoni
ENSPREG00000021797	ptcd2	92	42.742	ENSHGLG00000001234	PTCD2	97	42.742	Heterocephalus_glaber_female
ENSPREG00000021797	ptcd2	92	42.742	ENSHGLG00100015419	PTCD2	97	42.742	Heterocephalus_glaber_male
ENSPREG00000021797	ptcd2	97	63.969	ENSHCOG00000001703	ptcd2	99	63.969	Hippocampus_comes
ENSPREG00000021797	ptcd2	82	58.385	ENSIPUG00000006080	ptcd2	84	58.385	Ictalurus_punctatus
ENSPREG00000021797	ptcd2	88	44.413	ENSSTOG00000006596	PTCD2	91	44.413	Ictidomys_tridecemlineatus
ENSPREG00000021797	ptcd2	88	46.705	ENSJJAG00000024388	Ptcd2	91	46.705	Jaculus_jaculus
ENSPREG00000021797	ptcd2	93	66.942	ENSKMAG00000009329	ptcd2	95	66.942	Kryptolebias_marmoratus
ENSPREG00000021797	ptcd2	97	65.365	ENSLBEG00000024871	ptcd2	98	65.365	Labrus_bergylta
ENSPREG00000021797	ptcd2	95	54.787	ENSLOCG00000011122	ptcd2	98	54.787	Lepisosteus_oculatus
ENSPREG00000021797	ptcd2	75	47.231	ENSLAFG00000004115	PTCD2	98	47.883	Loxodonta_africana
ENSPREG00000021797	ptcd2	95	45.067	ENSMFAG00000031516	PTCD2	96	45.067	Macaca_fascicularis
ENSPREG00000021797	ptcd2	95	44.533	ENSMNEG00000007537	PTCD2	98	44.533	Macaca_nemestrina
ENSPREG00000021797	ptcd2	95	44.533	ENSMLEG00000031093	PTCD2	96	44.533	Mandrillus_leucophaeus
ENSPREG00000021797	ptcd2	96	71.733	ENSMAMG00000018529	ptcd2	98	71.733	Mastacembelus_armatus
ENSPREG00000021797	ptcd2	99	74.742	ENSMZEG00005003625	ptcd2	99	74.742	Maylandia_zebra
ENSPREG00000021797	ptcd2	88	43.391	ENSMGAG00000005033	PTCD2	100	43.391	Meleagris_gallopavo
ENSPREG00000021797	ptcd2	91	37.057	ENSMAUG00000020253	Ptcd2	96	37.057	Mesocricetus_auratus
ENSPREG00000021797	ptcd2	88	45.245	ENSMICG00000004535	PTCD2	90	45.245	Microcebus_murinus
ENSPREG00000021797	ptcd2	88	45.690	ENSMOCG00000019985	Ptcd2	91	45.690	Microtus_ochrogaster
ENSPREG00000021797	ptcd2	90	47.753	ENSMODG00000001695	PTCD2	92	47.753	Monodelphis_domestica
ENSPREG00000021797	ptcd2	98	71.802	ENSMALG00000022372	ptcd2	100	71.802	Monopterus_albus
ENSPREG00000021797	ptcd2	88	44.253	MGP_CAROLIEiJ_G0018829	Ptcd2	91	44.253	Mus_caroli
ENSPREG00000021797	ptcd2	88	43.966	ENSMUSG00000021650	Ptcd2	91	43.966	Mus_musculus
ENSPREG00000021797	ptcd2	88	45.402	MGP_PahariEiJ_G0015904	Ptcd2	91	45.402	Mus_pahari
ENSPREG00000021797	ptcd2	88	44.540	MGP_SPRETEiJ_G0019711	Ptcd2	91	44.540	Mus_spretus
ENSPREG00000021797	ptcd2	88	44.828	ENSMPUG00000014401	PTCD2	91	44.828	Mustela_putorius_furo
ENSPREG00000021797	ptcd2	88	44.253	ENSMLUG00000007374	PTCD2	90	44.253	Myotis_lucifugus
ENSPREG00000021797	ptcd2	88	45.115	ENSNGAG00000005027	Ptcd2	91	45.115	Nannospalax_galili
ENSPREG00000021797	ptcd2	84	72.644	ENSNBRG00000000092	-	100	72.644	Neolamprologus_brichardi
ENSPREG00000021797	ptcd2	97	75.526	ENSNBRG00000008174	ptcd2	99	75.526	Neolamprologus_brichardi
ENSPREG00000021797	ptcd2	88	44.092	ENSNLEG00000004516	PTCD2	89	44.092	Nomascus_leucogenys
ENSPREG00000021797	ptcd2	88	45.690	ENSOPRG00000007290	PTCD2	90	45.690	Ochotona_princeps
ENSPREG00000021797	ptcd2	90	44.507	ENSODEG00000016417	PTCD2	93	44.507	Octodon_degus
ENSPREG00000021797	ptcd2	85	75.449	ENSONIG00000011269	ptcd2	97	75.449	Oreochromis_niloticus
ENSPREG00000021797	ptcd2	90	43.944	ENSOCUG00000007970	PTCD2	93	43.944	Oryctolagus_cuniculus
ENSPREG00000021797	ptcd2	98	69.713	ENSORLG00000003851	ptcd2	98	69.713	Oryzias_latipes
ENSPREG00000021797	ptcd2	98	68.930	ENSORLG00020009823	ptcd2	100	68.930	Oryzias_latipes_hni
ENSPREG00000021797	ptcd2	88	66.957	ENSORLG00015016777	ptcd2	99	66.957	Oryzias_latipes_hsok
ENSPREG00000021797	ptcd2	98	68.668	ENSOMEG00000012396	ptcd2	93	68.668	Oryzias_melastigma
ENSPREG00000021797	ptcd2	88	45.690	ENSOGAG00000008390	PTCD2	90	45.690	Otolemur_garnettii
ENSPREG00000021797	ptcd2	88	45.690	ENSOARG00000005087	PTCD2	89	45.690	Ovis_aries
ENSPREG00000021797	ptcd2	88	44.253	ENSPPAG00000028480	PTCD2	90	44.253	Pan_paniscus
ENSPREG00000021797	ptcd2	88	43.966	ENSPTRG00000016968	PTCD2	90	43.966	Pan_troglodytes
ENSPREG00000021797	ptcd2	88	45.507	ENSPANG00000006611	PTCD2	89	45.507	Papio_anubis
ENSPREG00000021797	ptcd2	98	52.591	ENSPKIG00000019896	ptcd2	100	52.591	Paramormyrops_kingsleyae
ENSPREG00000021797	ptcd2	77	49.671	ENSPSIG00000014559	PTCD2	94	49.671	Pelodiscus_sinensis
ENSPREG00000021797	ptcd2	88	46.286	ENSPEMG00000000884	Ptcd2	91	46.286	Peromyscus_maniculatus_bairdii
ENSPREG00000021797	ptcd2	90	48.169	ENSPCIG00000029047	PTCD2	92	48.169	Phascolarctos_cinereus
ENSPREG00000021797	ptcd2	98	97.128	ENSPLAG00000010456	ptcd2	100	97.128	Poecilia_latipinna
ENSPREG00000021797	ptcd2	88	38.793	ENSPPYG00000015543	PTCD2	88	38.793	Pongo_abelii
ENSPREG00000021797	ptcd2	73	40.830	ENSPCAG00000006806	PTCD2	92	40.830	Procavia_capensis
ENSPREG00000021797	ptcd2	89	45.299	ENSPVAG00000010935	PTCD2	90	45.299	Pteropus_vampyrus
ENSPREG00000021797	ptcd2	99	74.742	ENSPNYG00000003122	ptcd2	99	74.742	Pundamilia_nyererei
ENSPREG00000021797	ptcd2	98	60.881	ENSPNAG00000021490	ptcd2	100	60.881	Pygocentrus_nattereri
ENSPREG00000021797	ptcd2	88	47.414	ENSRNOG00000028403	Ptcd2	91	47.414	Rattus_norvegicus
ENSPREG00000021797	ptcd2	88	41.667	ENSRBIG00000032929	PTCD2	89	41.667	Rhinopithecus_bieti
ENSPREG00000021797	ptcd2	88	45.115	ENSRROG00000000080	PTCD2	91	45.115	Rhinopithecus_roxellana
ENSPREG00000021797	ptcd2	88	43.804	ENSSBOG00000018911	PTCD2	91	43.804	Saimiri_boliviensis_boliviensis
ENSPREG00000021797	ptcd2	97	45.195	ENSSHAG00000003833	PTCD2	99	45.195	Sarcophilus_harrisii
ENSPREG00000021797	ptcd2	98	54.663	ENSSFOG00015015415	ptcd2	100	54.663	Scleropages_formosus
ENSPREG00000021797	ptcd2	95	64.420	ENSSMAG00000010350	ptcd2	94	64.420	Scophthalmus_maximus
ENSPREG00000021797	ptcd2	96	72.533	ENSSDUG00000008142	ptcd2	94	72.533	Seriola_dumerili
ENSPREG00000021797	ptcd2	96	72.533	ENSSLDG00000015284	ptcd2	98	72.533	Seriola_lalandi_dorsalis
ENSPREG00000021797	ptcd2	70	41.241	ENSSARG00000004983	PTCD2	87	41.241	Sorex_araneus
ENSPREG00000021797	ptcd2	90	44.633	ENSSPUG00000000176	PTCD2	89	44.633	Sphenodon_punctatus
ENSPREG00000021797	ptcd2	96	67.733	ENSSPAG00000008591	ptcd2	97	67.733	Stegastes_partitus
ENSPREG00000021797	ptcd2	88	45.115	ENSSSCG00000016975	PTCD2	82	45.115	Sus_scrofa
ENSPREG00000021797	ptcd2	82	45.794	ENSTGUG00000005705	PTCD2	93	45.794	Taeniopygia_guttata
ENSPREG00000021797	ptcd2	89	44.160	ENSTBEG00000016559	PTCD2	90	44.160	Tupaia_belangeri
ENSPREG00000021797	ptcd2	88	46.110	ENSTTRG00000011851	PTCD2	89	46.110	Tursiops_truncatus
ENSPREG00000021797	ptcd2	88	43.678	ENSUAMG00000007583	PTCD2	81	43.678	Ursus_americanus
ENSPREG00000021797	ptcd2	88	43.678	ENSUMAG00000007666	PTCD2	91	43.678	Ursus_maritimus
ENSPREG00000021797	ptcd2	88	43.966	ENSVPAG00000009597	PTCD2	89	43.966	Vicugna_pacos
ENSPREG00000021797	ptcd2	88	46.264	ENSVVUG00000007299	-	97	41.551	Vulpes_vulpes
ENSPREG00000021797	ptcd2	98	43.846	ENSXETG00000031652	PTCD2	100	43.846	Xenopus_tropicalis
ENSPREG00000021797	ptcd2	100	91.327	ENSXMAG00000005940	ptcd2	93	91.582	Xiphophorus_maculatus