EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000021902 (Gene tree)
Gene ID: 103474543
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 14291 bases
Position: chrLG13:14761934-14776224
Accession: 103474543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000032377	RRM_4	PF10598.9	3.2e-48	1	1
ENSPREP00000032359	RRM_4	PF10598.9	3.2e-48	1	1
ENSPREP00000032377	U5_2-snRNA_bdg	PF10597.9	7.5e-74	1	1
ENSPREP00000032359	U5_2-snRNA_bdg	PF10597.9	7.6e-74	1	1
ENSPREP00000032377	PRO8NT	PF08082.11	1.5e-87	1	1
ENSPREP00000032359	PRO8NT	PF08082.11	1.5e-87	1	1
ENSPREP00000032377	U6-snRNA_bdg	PF10596.9	1.8e-89	1	1
ENSPREP00000032359	U6-snRNA_bdg	PF10596.9	1.9e-89	1	1
ENSPREP00000032377	PROCN	PF08083.11	1.5e-235	1	1
ENSPREP00000032359	PROCN	PF08083.11	1.5e-235	1	1
ENSPREP00000032377	PRP8_domainIV	PF12134.8	4.4e-130	1	1
ENSPREP00000032359	PRP8_domainIV	PF12134.8	4.5e-130	1	1
ENSPREP00000032377	PROCT	PF08084.11	2.9e-53	1	1
ENSPREP00000032359	PROCT	PF08084.11	2.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000032723	-	7086	XM_008425604	ENSPREP00000032359	2358 (aa)	XP_008423826	UPI0004A2FBC4
ENSPRET00000032744	-	7002	-	ENSPREP00000032377	2333 (aa)	-	-

Gene Model

Click here to download ENSPREG00000021902's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000021902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000021902	prpf8	100	97.645	ENSG00000174231	PRPF8	100	97.645	Homo_sapiens
ENSPREG00000021902	prpf8	100	99.059	ENSAPOG00000010079	prpf8	100	99.059	Acanthochromis_polyacanthus
ENSPREG00000021902	prpf8	100	97.645	ENSAMEG00000007940	PRPF8	100	97.645	Ailuropoda_melanoleuca
ENSPREG00000021902	prpf8	100	97.292	ENSACIG00000018280	prpf8	100	97.292	Amphilophus_citrinellus
ENSPREG00000021902	prpf8	100	99.016	ENSAOCG00000010725	prpf8	100	99.016	Amphiprion_ocellaris
ENSPREG00000021902	prpf8	100	99.016	ENSAPEG00000014397	prpf8	100	99.016	Amphiprion_percula
ENSPREG00000021902	prpf8	100	98.375	ENSATEG00000010062	prpf8	100	98.375	Anabas_testudineus
ENSPREG00000021902	prpf8	96	98.087	ENSAPLG00000010357	PRPF8	100	98.087	Anas_platyrhynchos
ENSPREG00000021902	prpf8	82	96.438	ENSACAG00000014784	PRPF8	99	96.438	Anolis_carolinensis
ENSPREG00000021902	prpf8	100	97.645	ENSANAG00000032629	PRPF8	100	97.645	Aotus_nancymaae
ENSPREG00000021902	prpf8	100	98.558	ENSACLG00000020858	prpf8	100	98.558	Astatotilapia_calliptera
ENSPREG00000021902	prpf8	100	98.886	ENSAMXG00000020291	prpf8	100	98.886	Astyanax_mexicanus
ENSPREG00000021902	prpf8	100	97.645	ENSBTAG00000011488	PRPF8	100	97.645	Bos_taurus
ENSPREG00000021902	prpf8	99	86.358	WBGene00004187	prp-8	99	86.938	Caenorhabditis_elegans
ENSPREG00000021902	prpf8	100	97.645	ENSCJAG00000001911	PRPF8	100	97.645	Callithrix_jacchus
ENSPREG00000021902	prpf8	100	97.645	ENSCAFG00000019221	PRPF8	100	97.645	Canis_familiaris
ENSPREG00000021902	prpf8	96	97.992	ENSCAFG00020009943	PRPF8	100	97.992	Canis_lupus_dingo
ENSPREG00000021902	prpf8	100	97.645	ENSCHIG00000017499	PRPF8	100	97.645	Capra_hircus
ENSPREG00000021902	prpf8	100	97.645	ENSTSYG00000014120	PRPF8	100	97.645	Carlito_syrichta
ENSPREG00000021902	prpf8	96	95.768	ENSCAPG00000009459	PRPF8	99	95.768	Cavia_aperea
ENSPREG00000021902	prpf8	100	97.645	ENSCPOG00000010379	PRPF8	100	97.645	Cavia_porcellus
ENSPREG00000021902	prpf8	100	97.645	ENSCCAG00000031983	-	100	97.645	Cebus_capucinus
ENSPREG00000021902	prpf8	100	97.645	ENSCATG00000038595	PRPF8	100	97.645	Cercocebus_atys
ENSPREG00000021902	prpf8	100	97.645	ENSCLAG00000004388	PRPF8	100	97.645	Chinchilla_lanigera
ENSPREG00000021902	prpf8	100	97.645	ENSCSAG00000013929	PRPF8	100	97.645	Chlorocebus_sabaeus
ENSPREG00000021902	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSPREG00000021902	prpf8	100	97.816	ENSCPBG00000020409	PRPF8	100	97.816	Chrysemys_picta_bellii
ENSPREG00000021902	prpf8	99	92.755	ENSCSAVG00000007825	-	100	91.280	Ciona_savignyi
ENSPREG00000021902	prpf8	100	97.645	ENSCANG00000043088	PRPF8	100	97.645	Colobus_angolensis_palliatus
ENSPREG00000021902	prpf8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPREG00000021902	prpf8	100	98.846	ENSCSEG00000007905	prpf8	100	98.846	Cynoglossus_semilaevis
ENSPREG00000021902	prpf8	100	98.463	ENSDARG00000026180	prpf8	100	98.463	Danio_rerio
ENSPREG00000021902	prpf8	93	97.928	ENSDNOG00000018471	PRPF8	99	97.928	Dasypus_novemcinctus
ENSPREG00000021902	prpf8	84	96.522	ENSDORG00000006185	Prpf8	96	96.522	Dipodomys_ordii
ENSPREG00000021902	prpf8	99	91.384	FBgn0033688	Prp8	97	91.793	Drosophila_melanogaster
ENSPREG00000021902	prpf8	100	92.291	ENSETEG00000017592	PRPF8	100	92.291	Echinops_telfairi
ENSPREG00000021902	prpf8	99	93.333	ENSEBUG00000006548	prpf8	99	93.333	Eptatretus_burgeri
ENSPREG00000021902	prpf8	100	97.645	ENSEASG00005009514	PRPF8	100	97.645	Equus_asinus_asinus
ENSPREG00000021902	prpf8	98	98.022	ENSECAG00000021318	PRPF8	100	98.022	Equus_caballus
ENSPREG00000021902	prpf8	67	97.778	ENSEEUG00000012120	-	67	97.778	Erinaceus_europaeus
ENSPREG00000021902	prpf8	98	97.378	ENSELUG00000007120	prpf8	99	97.378	Esox_lucius
ENSPREG00000021902	prpf8	100	97.645	ENSFCAG00000006297	PRPF8	100	97.645	Felis_catus
ENSPREG00000021902	prpf8	100	97.901	ENSFALG00000006628	PRPF8	100	97.901	Ficedula_albicollis
ENSPREG00000021902	prpf8	100	97.645	ENSFDAG00000004711	PRPF8	100	97.645	Fukomys_damarensis
ENSPREG00000021902	prpf8	100	98.847	ENSFHEG00000021084	prpf8	100	98.847	Fundulus_heteroclitus
ENSPREG00000021902	prpf8	100	96.489	ENSGMOG00000002028	prpf8	99	96.489	Gadus_morhua
ENSPREG00000021902	prpf8	100	97.901	ENSGALG00000002943	PRPF8	100	97.901	Gallus_gallus
ENSPREG00000021902	prpf8	99	99.702	ENSGAFG00000010337	prpf8	100	99.702	Gambusia_affinis
ENSPREG00000021902	prpf8	100	98.972	ENSGACG00000008504	prpf8	100	98.972	Gasterosteus_aculeatus
ENSPREG00000021902	prpf8	100	97.816	ENSGAGG00000008350	PRPF8	100	97.816	Gopherus_agassizii
ENSPREG00000021902	prpf8	100	97.645	ENSGGOG00000005516	PRPF8	100	97.645	Gorilla_gorilla
ENSPREG00000021902	prpf8	100	98.671	ENSHBUG00000016192	prpf8	100	98.671	Haplochromis_burtoni
ENSPREG00000021902	prpf8	100	97.645	ENSHGLG00000012029	PRPF8	100	97.645	Heterocephalus_glaber_female
ENSPREG00000021902	prpf8	100	97.645	ENSHGLG00100016494	PRPF8	100	97.645	Heterocephalus_glaber_male
ENSPREG00000021902	prpf8	100	98.717	ENSHCOG00000016414	prpf8	100	98.717	Hippocampus_comes
ENSPREG00000021902	prpf8	100	98.589	ENSIPUG00000023230	prpf8	100	98.589	Ictalurus_punctatus
ENSPREG00000021902	prpf8	100	97.645	ENSSTOG00000005128	PRPF8	100	97.645	Ictidomys_tridecemlineatus
ENSPREG00000021902	prpf8	100	95.503	ENSJJAG00000021159	Prpf8	100	95.503	Jaculus_jaculus
ENSPREG00000021902	prpf8	99	99.018	ENSKMAG00000016118	prpf8	100	99.018	Kryptolebias_marmoratus
ENSPREG00000021902	prpf8	100	98.888	ENSLBEG00000026903	prpf8	100	98.888	Labrus_bergylta
ENSPREG00000021902	prpf8	95	95.754	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSPREG00000021902	prpf8	99	98.544	ENSLOCG00000005409	prpf8	99	98.544	Lepisosteus_oculatus
ENSPREG00000021902	prpf8	100	97.645	ENSLAFG00000015445	PRPF8	100	97.645	Loxodonta_africana
ENSPREG00000021902	prpf8	100	97.645	ENSMFAG00000039995	PRPF8	100	97.645	Macaca_fascicularis
ENSPREG00000021902	prpf8	100	97.645	ENSMMUG00000004820	PRPF8	100	97.645	Macaca_mulatta
ENSPREG00000021902	prpf8	100	97.645	ENSMNEG00000035713	PRPF8	100	97.645	Macaca_nemestrina
ENSPREG00000021902	prpf8	100	97.645	ENSMLEG00000037937	PRPF8	100	97.645	Mandrillus_leucophaeus
ENSPREG00000021902	prpf8	100	99.016	ENSMAMG00000008919	prpf8	100	99.016	Mastacembelus_armatus
ENSPREG00000021902	prpf8	100	98.558	ENSMZEG00005015073	prpf8	100	98.558	Maylandia_zebra
ENSPREG00000021902	prpf8	100	97.901	ENSMGAG00000004769	PRPF8	100	97.901	Meleagris_gallopavo
ENSPREG00000021902	prpf8	100	97.645	ENSMICG00000010320	PRPF8	100	97.645	Microcebus_murinus
ENSPREG00000021902	prpf8	100	97.645	ENSMOCG00000016838	Prpf8	100	97.645	Microtus_ochrogaster
ENSPREG00000021902	prpf8	100	98.460	ENSMMOG00000011887	prpf8	100	98.460	Mola_mola
ENSPREG00000021902	prpf8	100	97.645	ENSMODG00000010480	PRPF8	100	97.645	Monodelphis_domestica
ENSPREG00000021902	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSPREG00000021902	prpf8	100	97.602	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.602	Mus_caroli
ENSPREG00000021902	prpf8	100	97.602	ENSMUSG00000020850	Prpf8	100	97.602	Mus_musculus
ENSPREG00000021902	prpf8	100	97.559	MGP_PahariEiJ_G0017877	Prpf8	100	97.559	Mus_pahari
ENSPREG00000021902	prpf8	100	97.602	MGP_SPRETEiJ_G0017583	Prpf8	100	97.602	Mus_spretus
ENSPREG00000021902	prpf8	100	97.645	ENSMPUG00000013227	PRPF8	100	97.645	Mustela_putorius_furo
ENSPREG00000021902	prpf8	100	97.519	ENSMLUG00000002666	PRPF8	100	97.519	Myotis_lucifugus
ENSPREG00000021902	prpf8	100	95.889	ENSNGAG00000005305	Prpf8	100	95.889	Nannospalax_galili
ENSPREG00000021902	prpf8	100	98.601	ENSNBRG00000013127	prpf8	100	98.601	Neolamprologus_brichardi
ENSPREG00000021902	prpf8	97	96.694	ENSNLEG00000000897	PRPF8	98	96.694	Nomascus_leucogenys
ENSPREG00000021902	prpf8	99	96.219	ENSMEUG00000015999	PRPF8	100	96.219	Notamacropus_eugenii
ENSPREG00000021902	prpf8	100	96.146	ENSOPRG00000003102	PRPF8	100	96.103	Ochotona_princeps
ENSPREG00000021902	prpf8	100	97.645	ENSODEG00000008468	PRPF8	100	97.645	Octodon_degus
ENSPREG00000021902	prpf8	100	98.601	ENSONIG00000008153	prpf8	100	98.601	Oreochromis_niloticus
ENSPREG00000021902	prpf8	82	99.159	ENSOANG00000004250	PRPF8	97	99.159	Ornithorhynchus_anatinus
ENSPREG00000021902	prpf8	100	97.645	ENSOCUG00000000081	PRPF8	100	97.645	Oryctolagus_cuniculus
ENSPREG00000021902	prpf8	100	98.855	ENSORLG00000008036	prpf8	100	98.855	Oryzias_latipes
ENSPREG00000021902	prpf8	100	98.813	ENSORLG00020021070	prpf8	100	98.813	Oryzias_latipes_hni
ENSPREG00000021902	prpf8	100	98.897	ENSORLG00015002340	prpf8	100	98.897	Oryzias_latipes_hsok
ENSPREG00000021902	prpf8	100	97.286	ENSOMEG00000016866	prpf8	100	97.286	Oryzias_melastigma
ENSPREG00000021902	prpf8	100	97.519	ENSOARG00000013312	PRPF8	100	97.519	Ovis_aries
ENSPREG00000021902	prpf8	100	97.645	ENSPPAG00000042753	PRPF8	100	97.645	Pan_paniscus
ENSPREG00000021902	prpf8	100	97.645	ENSPPRG00000008746	PRPF8	100	97.645	Panthera_pardus
ENSPREG00000021902	prpf8	100	97.559	ENSPTIG00000019200	PRPF8	100	97.559	Panthera_tigris_altaica
ENSPREG00000021902	prpf8	100	97.645	ENSPTRG00000039576	PRPF8	100	97.645	Pan_troglodytes
ENSPREG00000021902	prpf8	99	98.045	ENSPANG00000024607	PRPF8	98	98.045	Papio_anubis
ENSPREG00000021902	prpf8	100	98.295	ENSPKIG00000011201	prpf8	100	98.295	Paramormyrops_kingsleyae
ENSPREG00000021902	prpf8	100	97.773	ENSPSIG00000013393	PRPF8	100	97.773	Pelodiscus_sinensis
ENSPREG00000021902	prpf8	100	97.645	ENSPEMG00000021699	Prpf8	100	97.645	Peromyscus_maniculatus_bairdii
ENSPREG00000021902	prpf8	96	93.808	ENSPMAG00000005438	prpf8	100	93.853	Petromyzon_marinus
ENSPREG00000021902	prpf8	100	97.645	ENSPCIG00000022603	PRPF8	100	97.992	Phascolarctos_cinereus
ENSPREG00000021902	prpf8	100	99.788	ENSPFOG00000007005	prpf8	100	99.788	Poecilia_formosa
ENSPREG00000021902	prpf8	100	98.371	ENSPLAG00000020777	prpf8	100	98.371	Poecilia_latipinna
ENSPREG00000021902	prpf8	100	99.788	ENSPMEG00000004051	prpf8	100	99.788	Poecilia_mexicana
ENSPREG00000021902	prpf8	100	97.645	ENSPPYG00000007777	PRPF8	100	97.645	Pongo_abelii
ENSPREG00000021902	prpf8	90	96.040	ENSPCAG00000008938	PRPF8	90	96.040	Procavia_capensis
ENSPREG00000021902	prpf8	100	97.645	ENSPCOG00000015182	PRPF8	100	97.645	Propithecus_coquereli
ENSPREG00000021902	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSPREG00000021902	prpf8	100	98.671	ENSPNYG00000016356	prpf8	100	98.671	Pundamilia_nyererei
ENSPREG00000021902	prpf8	100	98.760	ENSPNAG00000009247	prpf8	100	98.760	Pygocentrus_nattereri
ENSPREG00000021902	prpf8	100	97.602	ENSRNOG00000003495	Prpf8	100	97.602	Rattus_norvegicus
ENSPREG00000021902	prpf8	100	97.645	ENSRBIG00000031219	PRPF8	100	97.645	Rhinopithecus_bieti
ENSPREG00000021902	prpf8	100	97.645	ENSRROG00000038014	PRPF8	100	97.645	Rhinopithecus_roxellana
ENSPREG00000021902	prpf8	99	62.516	YHR165C	PRP8	95	62.559	Saccharomyces_cerevisiae
ENSPREG00000021902	prpf8	100	97.645	ENSSBOG00000029717	PRPF8	100	97.645	Saimiri_boliviensis_boliviensis
ENSPREG00000021902	prpf8	100	97.602	ENSSHAG00000006167	PRPF8	100	97.602	Sarcophilus_harrisii
ENSPREG00000021902	prpf8	100	98.463	ENSSFOG00015013905	prpf8	100	98.463	Scleropages_formosus
ENSPREG00000021902	prpf8	100	98.717	ENSSMAG00000017736	prpf8	100	98.717	Scophthalmus_maximus
ENSPREG00000021902	prpf8	100	99.016	ENSSDUG00000003029	prpf8	100	99.016	Seriola_dumerili
ENSPREG00000021902	prpf8	68	99.625	ENSSLDG00000017096	prpf8	100	99.625	Seriola_lalandi_dorsalis
ENSPREG00000021902	prpf8	87	94.554	ENSSARG00000002892	PRPF8	87	94.554	Sorex_araneus
ENSPREG00000021902	prpf8	100	97.773	ENSSPUG00000007463	PRPF8	100	97.773	Sphenodon_punctatus
ENSPREG00000021902	prpf8	100	98.460	ENSSPAG00000015639	prpf8	100	98.460	Stegastes_partitus
ENSPREG00000021902	prpf8	100	97.645	ENSSSCG00000017817	PRPF8	100	97.645	Sus_scrofa
ENSPREG00000021902	prpf8	52	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSPREG00000021902	prpf8	100	97.901	ENSTGUG00000005648	-	100	97.901	Taeniopygia_guttata
ENSPREG00000021902	prpf8	100	98.503	ENSTRUG00000015906	prpf8	100	98.503	Takifugu_rubripes
ENSPREG00000021902	prpf8	95	99.403	ENSTNIG00000003460	prpf8	99	99.403	Tetraodon_nigroviridis
ENSPREG00000021902	prpf8	93	98.911	ENSTBEG00000006431	PRPF8	93	98.911	Tupaia_belangeri
ENSPREG00000021902	prpf8	100	97.045	ENSTTRG00000006869	PRPF8	100	97.045	Tursiops_truncatus
ENSPREG00000021902	prpf8	54	96.664	ENSUAMG00000015644	-	96	96.664	Ursus_americanus
ENSPREG00000021902	prpf8	100	97.388	ENSUMAG00000009385	PRPF8	100	97.388	Ursus_maritimus
ENSPREG00000021902	prpf8	71	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSPREG00000021902	prpf8	100	97.645	ENSVVUG00000021695	PRPF8	99	97.645	Vulpes_vulpes
ENSPREG00000021902	prpf8	100	97.517	ENSXETG00000022259	prpf8	100	97.517	Xenopus_tropicalis
ENSPREG00000021902	prpf8	100	99.402	ENSXCOG00000012775	prpf8	100	99.402	Xiphophorus_couchianus
ENSPREG00000021902	prpf8	100	99.445	ENSXMAG00000008505	prpf8	100	99.445	Xiphophorus_maculatus