EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000022085 (Gene tree)
Gene ID: 103462359
Gene Symbol: efl1
Alias: EFTUD1|FAM42A|FLJ13119|HsT19294|RIA1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 41166 bases
Position: chrLG3:13241720-13282885
Accession: 103462359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000032600	GTP_EFTU	PF00009.27	4.4e-61	1	1
ENSPREP00000032600	GTP_EFTU_D2	PF03144.25	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000032969	-	3330	XM_008405089	ENSPREP00000032600	1106 (aa)	XP_008403311	UPI0004A40AA0

Gene Model

Click here to download ENSPREG00000022085's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000022085	efl1	89	36.161	ENSPREG00000008298	-	96	36.018
ENSPREG00000022085	efl1	92	35.794	ENSPREG00000017633	eef2b	98	35.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022085	efl1	99	67.527	ENSG00000140598	EFL1	96	75.141	Homo_sapiens
ENSPREG00000022085	efl1	100	80.654	ENSAPOG00000000188	efl1	100	80.389	Acanthochromis_polyacanthus
ENSPREG00000022085	efl1	99	67.629	ENSAMEG00000006031	EFL1	99	67.835	Ailuropoda_melanoleuca
ENSPREG00000022085	efl1	100	81.843	ENSACIG00000017802	efl1	100	81.932	Amphilophus_citrinellus
ENSPREG00000022085	efl1	100	80.556	ENSAOCG00000023933	efl1	100	80.556	Amphiprion_ocellaris
ENSPREG00000022085	efl1	100	81.007	ENSAPEG00000000262	efl1	100	80.830	Amphiprion_percula
ENSPREG00000022085	efl1	100	79.947	ENSATEG00000012373	efl1	100	79.859	Anabas_testudineus
ENSPREG00000022085	efl1	99	69.823	ENSAPLG00000011147	EFL1	99	69.823	Anas_platyrhynchos
ENSPREG00000022085	efl1	100	69.008	ENSACAG00000011040	EFL1	100	69.183	Anolis_carolinensis
ENSPREG00000022085	efl1	99	67.520	ENSANAG00000027459	EFL1	99	67.489	Aotus_nancymaae
ENSPREG00000022085	efl1	100	80.410	ENSACLG00000025780	efl1	100	80.410	Astatotilapia_calliptera
ENSPREG00000022085	efl1	100	72.435	ENSAMXG00000019529	efl1	100	72.744	Astyanax_mexicanus
ENSPREG00000022085	efl1	99	67.282	ENSBTAG00000003410	EFL1	99	67.225	Bos_taurus
ENSPREG00000022085	efl1	93	36.320	WBGene00010732	K10C3.5	98	46.951	Caenorhabditis_elegans
ENSPREG00000022085	efl1	85	91.270	ENSCJAG00000015607	-	93	91.270	Callithrix_jacchus
ENSPREG00000022085	efl1	99	67.575	ENSCAFG00000013671	EFL1	99	67.549	Canis_familiaris
ENSPREG00000022085	efl1	99	67.489	ENSCHIG00000001883	EFL1	99	67.167	Capra_hircus
ENSPREG00000022085	efl1	100	66.932	ENSTSYG00000000348	EFL1	100	66.844	Carlito_syrichta
ENSPREG00000022085	efl1	99	58.216	ENSCAPG00000017944	EFL1	100	58.099	Cavia_aperea
ENSPREG00000022085	efl1	99	67.520	ENSCPOG00000001924	EFL1	99	67.668	Cavia_porcellus
ENSPREG00000022085	efl1	99	67.705	ENSCCAG00000034450	EFL1	99	67.794	Cebus_capucinus
ENSPREG00000022085	efl1	99	66.993	ENSCATG00000031678	-	100	66.932	Cercocebus_atys
ENSPREG00000022085	efl1	99	67.403	ENSCLAG00000010155	EFL1	99	67.668	Chinchilla_lanigera
ENSPREG00000022085	efl1	99	67.082	ENSCSAG00000015165	EFL1	100	66.932	Chlorocebus_sabaeus
ENSPREG00000022085	efl1	73	66.114	ENSCHOG00000014029	EFL1	78	66.114	Choloepus_hoffmanni
ENSPREG00000022085	efl1	99	69.043	ENSCPBG00000017638	EFL1	99	68.957	Chrysemys_picta_bellii
ENSPREG00000022085	efl1	100	56.863	ENSCSAVG00000001787	-	100	56.863	Ciona_savignyi
ENSPREG00000022085	efl1	99	67.438	ENSCANG00000038093	EFL1	99	67.584	Colobus_angolensis_palliatus
ENSPREG00000022085	efl1	100	64.525	ENSCGRG00001010826	Efl1	100	64.701	Cricetulus_griseus_chok1gshd
ENSPREG00000022085	efl1	100	67.342	ENSCGRG00000003273	Efl1	100	67.518	Cricetulus_griseus_crigri
ENSPREG00000022085	efl1	99	76.465	ENSCSEG00000005856	efl1	99	76.264	Cynoglossus_semilaevis
ENSPREG00000022085	efl1	93	81.058	ENSCVAG00000011863	efl1	95	81.564	Cyprinodon_variegatus
ENSPREG00000022085	efl1	100	75.267	ENSDARG00000079672	efl1	98	75.267	Danio_rerio
ENSPREG00000022085	efl1	99	67.343	ENSDNOG00000006097	EFL1	99	67.255	Dasypus_novemcinctus
ENSPREG00000022085	efl1	99	66.549	ENSDORG00000000719	Efl1	99	67.167	Dipodomys_ordii
ENSPREG00000022085	efl1	100	46.922	FBgn0053158	CG33158	100	47.048	Drosophila_melanogaster
ENSPREG00000022085	efl1	88	64.254	ENSETEG00000004309	EFL1	95	64.989	Echinops_telfairi
ENSPREG00000022085	efl1	85	67.824	ENSEBUG00000010738	efl1	99	68.140	Eptatretus_burgeri
ENSPREG00000022085	efl1	99	67.345	ENSEASG00005007108	EFL1	99	67.522	Equus_asinus_asinus
ENSPREG00000022085	efl1	95	66.698	ENSECAG00000016354	EFL1	99	66.883	Equus_caballus
ENSPREG00000022085	efl1	70	70.402	ENSEEUG00000006326	EFL1	79	70.402	Erinaceus_europaeus
ENSPREG00000022085	efl1	100	71.491	ENSELUG00000002520	efl1	99	81.695	Esox_lucius
ENSPREG00000022085	efl1	99	68.238	ENSFCAG00000007741	EFL1	99	68.060	Felis_catus
ENSPREG00000022085	efl1	100	68.842	ENSFALG00000011103	EFL1	100	68.755	Ficedula_albicollis
ENSPREG00000022085	efl1	100	66.813	ENSFDAG00000009023	EFL1	100	66.989	Fukomys_damarensis
ENSPREG00000022085	efl1	100	86.421	ENSFHEG00000017795	efl1	100	86.421	Fundulus_heteroclitus
ENSPREG00000022085	efl1	99	74.205	ENSGMOG00000005041	efl1	100	74.114	Gadus_morhua
ENSPREG00000022085	efl1	100	69.331	ENSGALG00000006225	EFL1	100	69.191	Gallus_gallus
ENSPREG00000022085	efl1	100	76.889	ENSGACG00000012495	efl1	100	76.533	Gasterosteus_aculeatus
ENSPREG00000022085	efl1	100	69.774	ENSGAGG00000022841	EFL1	100	69.774	Gopherus_agassizii
ENSPREG00000022085	efl1	97	62.477	ENSGGOG00000005017	EFL1	100	62.477	Gorilla_gorilla
ENSPREG00000022085	efl1	100	80.444	ENSHBUG00000022667	efl1	100	80.444	Haplochromis_burtoni
ENSPREG00000022085	efl1	100	64.965	ENSHGLG00000011798	EFL1	100	64.965	Heterocephalus_glaber_female
ENSPREG00000022085	efl1	99	67.551	ENSHGLG00100010319	EFTUD1	93	81.818	Heterocephalus_glaber_male
ENSPREG00000022085	efl1	100	77.620	ENSHCOG00000007325	efl1	100	77.620	Hippocampus_comes
ENSPREG00000022085	efl1	100	72.074	ENSIPUG00000023360	EFTUD1	100	71.986	Ictalurus_punctatus
ENSPREG00000022085	efl1	100	64.530	ENSSTOG00000022945	EFL1	100	64.618	Ictidomys_tridecemlineatus
ENSPREG00000022085	efl1	99	67.668	ENSJJAG00000018598	Efl1	99	67.933	Jaculus_jaculus
ENSPREG00000022085	efl1	100	79.274	ENSLBEG00000015269	efl1	100	79.274	Labrus_bergylta
ENSPREG00000022085	efl1	100	70.445	ENSLACG00000016121	EFL1	100	70.096	Latimeria_chalumnae
ENSPREG00000022085	efl1	100	72.314	ENSLOCG00000012862	efl1	99	72.999	Lepisosteus_oculatus
ENSPREG00000022085	efl1	99	66.019	ENSLAFG00000012504	EFL1	99	66.108	Loxodonta_africana
ENSPREG00000022085	efl1	99	67.229	ENSMFAG00000032657	-	99	67.407	Macaca_fascicularis
ENSPREG00000022085	efl1	99	65.259	ENSMMUG00000023353	EFL1	99	65.431	Macaca_mulatta
ENSPREG00000022085	efl1	100	66.932	ENSMNEG00000041671	-	98	67.318	Macaca_nemestrina
ENSPREG00000022085	efl1	100	66.932	ENSMLEG00000033735	EFL1	100	67.109	Mandrillus_leucophaeus
ENSPREG00000022085	efl1	100	80.910	ENSMAMG00000011336	efl1	100	80.731	Mastacembelus_armatus
ENSPREG00000022085	efl1	100	80.605	ENSMZEG00005003012	efl1	100	80.605	Maylandia_zebra
ENSPREG00000022085	efl1	100	69.264	ENSMGAG00000007991	EFL1	100	69.123	Meleagris_gallopavo
ENSPREG00000022085	efl1	100	67.518	ENSMAUG00000010709	Efl1	100	67.694	Mesocricetus_auratus
ENSPREG00000022085	efl1	100	67.603	ENSMICG00000027853	EFL1	95	73.566	Microcebus_murinus
ENSPREG00000022085	efl1	100	67.105	ENSMOCG00000007470	Efl1	100	67.281	Microtus_ochrogaster
ENSPREG00000022085	efl1	100	72.874	ENSMMOG00000015370	efl1	100	73.118	Mola_mola
ENSPREG00000022085	efl1	100	67.105	ENSMODG00000019386	EFL1	100	67.193	Monodelphis_domestica
ENSPREG00000022085	efl1	100	79.152	ENSMALG00000018810	efl1	100	78.710	Monopterus_albus
ENSPREG00000022085	efl1	100	67.575	MGP_CAROLIEiJ_G0029936	Efl1	99	79.012	Mus_caroli
ENSPREG00000022085	efl1	100	67.518	ENSMUSG00000038563	Efl1	100	78.205	Mus_musculus
ENSPREG00000022085	efl1	100	67.135	MGP_PahariEiJ_G0013157	Efl1	100	78.205	Mus_pahari
ENSPREG00000022085	efl1	95	77.778	MGP_SPRETEiJ_G0031038	Efl1	94	77.778	Mus_spretus
ENSPREG00000022085	efl1	99	67.342	ENSMPUG00000015494	EFL1	99	67.430	Mustela_putorius_furo
ENSPREG00000022085	efl1	100	67.898	ENSNGAG00000017740	Efl1	100	68.074	Nannospalax_galili
ENSPREG00000022085	efl1	93	66.381	ENSNLEG00000010679	EFL1	100	66.412	Nomascus_leucogenys
ENSPREG00000022085	efl1	63	73.585	ENSMEUG00000012049	-	69	73.585	Notamacropus_eugenii
ENSPREG00000022085	efl1	64	63.415	ENSOPRG00000012488	-	57	88.710	Ochotona_princeps
ENSPREG00000022085	efl1	100	66.225	ENSODEG00000016193	EFL1	100	67.020	Octodon_degus
ENSPREG00000022085	efl1	100	79.259	ENSONIG00000003394	efl1	100	79.630	Oreochromis_niloticus
ENSPREG00000022085	efl1	100	67.458	ENSOCUG00000012163	EFL1	100	67.342	Oryctolagus_cuniculus
ENSPREG00000022085	efl1	62	72.818	ENSORLG00000020390	efl1	100	73.066	Oryzias_latipes
ENSPREG00000022085	efl1	100	77.326	ENSORLG00015012031	efl1	98	82.051	Oryzias_latipes_hsok
ENSPREG00000022085	efl1	100	78.500	ENSOMEG00000022784	efl1	100	78.500	Oryzias_melastigma
ENSPREG00000022085	efl1	99	67.518	ENSOARG00000014452	EFL1	99	67.196	Ovis_aries
ENSPREG00000022085	efl1	99	63.265	ENSPPAG00000039672	EFL1	99	63.419	Pan_paniscus
ENSPREG00000022085	efl1	99	68.416	ENSPPRG00000002193	EFL1	99	68.149	Panthera_pardus
ENSPREG00000022085	efl1	99	68.238	ENSPTIG00000007053	EFL1	99	67.794	Panthera_tigris_altaica
ENSPREG00000022085	efl1	99	67.436	ENSPTRG00000007374	EFL1	99	67.436	Pan_troglodytes
ENSPREG00000022085	efl1	100	66.932	ENSPANG00000015635	-	98	67.109	Papio_anubis
ENSPREG00000022085	efl1	99	71.982	ENSPKIG00000018456	efl1	99	71.634	Paramormyrops_kingsleyae
ENSPREG00000022085	efl1	100	68.870	ENSPSIG00000007790	EFL1	100	68.783	Pelodiscus_sinensis
ENSPREG00000022085	efl1	93	62.535	ENSPMAG00000002026	efl1	100	62.165	Petromyzon_marinus
ENSPREG00000022085	efl1	100	68.158	ENSPCIG00000004372	EFL1	100	67.867	Phascolarctos_cinereus
ENSPREG00000022085	efl1	100	96.745	ENSPFOG00000018687	efl1	100	96.745	Poecilia_formosa
ENSPREG00000022085	efl1	100	96.564	ENSPLAG00000001988	efl1	100	96.564	Poecilia_latipinna
ENSPREG00000022085	efl1	100	96.383	ENSPMEG00000000402	efl1	100	96.383	Poecilia_mexicana
ENSPREG00000022085	efl1	99	67.911	ENSPPYG00000006724	EFL1	99	68.057	Pongo_abelii
ENSPREG00000022085	efl1	99	67.405	ENSPVAG00000003189	EFL1	99	67.405	Pteropus_vampyrus
ENSPREG00000022085	efl1	100	72.395	ENSPNYG00000019406	efl1	100	72.663	Pundamilia_nyererei
ENSPREG00000022085	efl1	100	74.233	ENSPNAG00000012104	efl1	100	73.970	Pygocentrus_nattereri
ENSPREG00000022085	efl1	100	68.222	ENSRNOG00000032723	Efl1	100	68.134	Rattus_norvegicus
ENSPREG00000022085	efl1	99	67.260	ENSRBIG00000040576	EFL1	100	67.197	Rhinopithecus_bieti
ENSPREG00000022085	efl1	100	65.889	ENSRROG00000031475	EFL1	100	66.068	Rhinopithecus_roxellana
ENSPREG00000022085	efl1	99	45.418	YNL163C	RIA1	89	46.377	Saccharomyces_cerevisiae
ENSPREG00000022085	efl1	99	67.822	ENSSBOG00000018280	EFL1	99	67.822	Saimiri_boliviensis_boliviensis
ENSPREG00000022085	efl1	100	64.392	ENSSHAG00000018863	EFL1	100	64.392	Sarcophilus_harrisii
ENSPREG00000022085	efl1	100	73.547	ENSSFOG00015016244	efl1	100	73.547	Scleropages_formosus
ENSPREG00000022085	efl1	100	79.608	ENSSMAG00000016928	efl1	100	79.430	Scophthalmus_maximus
ENSPREG00000022085	efl1	100	80.851	ENSSDUG00000013271	efl1	100	80.533	Seriola_dumerili
ENSPREG00000022085	efl1	100	80.957	ENSSLDG00000014655	efl1	100	80.639	Seriola_lalandi_dorsalis
ENSPREG00000022085	efl1	100	69.211	ENSSPUG00000000941	EFL1	100	68.924	Sphenodon_punctatus
ENSPREG00000022085	efl1	100	81.721	ENSSPAG00000011885	efl1	100	81.366	Stegastes_partitus
ENSPREG00000022085	efl1	99	67.673	ENSSSCG00000001792	EFL1	99	67.851	Sus_scrofa
ENSPREG00000022085	efl1	100	69.440	ENSTGUG00000007850	EFL1	100	69.440	Taeniopygia_guttata
ENSPREG00000022085	efl1	100	68.978	ENSTNIG00000003399	efl1	100	68.889	Tetraodon_nigroviridis
ENSPREG00000022085	efl1	74	77.640	ENSTBEG00000011804	EFL1	78	77.640	Tupaia_belangeri
ENSPREG00000022085	efl1	99	66.607	ENSTTRG00000011243	EFL1	99	66.844	Tursiops_truncatus
ENSPREG00000022085	efl1	99	67.489	ENSUAMG00000022106	EFL1	99	67.401	Ursus_americanus
ENSPREG00000022085	efl1	99	67.665	ENSUMAG00000010303	EFL1	99	67.577	Ursus_maritimus
ENSPREG00000022085	efl1	89	78.926	ENSVPAG00000005735	EFL1	80	78.926	Vicugna_pacos
ENSPREG00000022085	efl1	99	67.546	ENSVVUG00000004967	EFL1	99	67.520	Vulpes_vulpes
ENSPREG00000022085	efl1	100	70.237	ENSXETG00000015701	EFL1	100	70.263	Xenopus_tropicalis
ENSPREG00000022085	efl1	100	96.474	ENSXMAG00000023705	efl1	100	96.474	Xiphophorus_maculatus