EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPREG00000022167 (Gene tree)
Gene ID
103481258
Gene Symbol
-
Alias
-
Full Name
ras-related protein Rab-5C
Gene Type
protein_coding
Species
Poecilia_reticulata
Status
putative
Strand
Plus strand
Length
9045 bases
Position
chrLG19:5560430-5569474
Accession
103481258
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPREP00000032719MMR_HSR1PF01926.238.1e-0511
ENSPREP00000032760MMR_HSR1PF01926.230.0001111
ENSPREP00000032745MMR_HSR1PF01926.230.0001211
ENSPREP00000032734MMR_HSR1PF01926.230.0001411
ENSPREP00000032751MMR_HSR1PF01926.230.0001411
ENSPREP00000032758MMR_HSR1PF01926.230.0001411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPRET00000033091-588-ENSPREP00000032719195 (aa)--
ENSPRET00000033106-687-ENSPREP00000032734228 (aa)--
ENSPRET00000033117-636-ENSPREP00000032745211 (aa)--
ENSPRET00000033123-645-ENSPREP00000032751214 (aa)--
ENSPRET00000033132-618-ENSPREP00000032760205 (aa)--
ENSPRET00000033130-666XM_008436630ENSPREP00000032758221 (aa)XP_008434852-
Gene Model
Click here to download ENSPREG00000022167's gene model file
Pathways
Pathway IDPathway NameSource
pret04144EndocytosisKEGG
pret04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022167's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPREG00000022167-8838.202ENSPREG00000010284rab158438.202
ENSPREG00000022167-8441.718ENSPREG00000005323si:dkey-16l2.168139.766
ENSPREG00000022167-7938.750ENSPREG00000003221rab33a5038.012
ENSPREG00000022167-8030.337ENSPREG00000010752rheb9230.337
ENSPREG00000022167-8533.155ENSPREG00000001864-8133.155
ENSPREG00000022167-8430.636ENSPREG00000018287KRAS9631.183
ENSPREG00000022167-7933.962ENSPREG00000022241si:dkey-13a21.47933.951
ENSPREG00000022167-8634.831ENSPREG00000006970rab9b8035.000
ENSPREG00000022167-7948.701ENSPREG00000006357rab11ba6046.707
ENSPREG00000022167-8835.028ENSPREG00000007129RAB39B8335.028
ENSPREG00000022167-8440.476ENSPREG00000017750RAB7A8340.462
ENSPREG00000022167-7945.806ENSPREG00000017517zgc:1719277943.452
ENSPREG00000022167-8744.388ENSPREG00000006119rab25a9143.684
ENSPREG00000022167-7737.419ENSPREG00000001832rab9a7637.419
ENSPREG00000022167-8439.264ENSPREG00000019783RAB158238.372
ENSPREG00000022167-7947.742ENSPREG00000020321rab1ab8743.503
ENSPREG00000022167-6031.356ENSPREG00000016664rap2b9332.824
ENSPREG00000022167-7947.742ENSPREG00000004889-7946.061
ENSPREG00000022167-8641.317ENSPREG00000017567rab138442.262
ENSPREG00000022167-7948.052ENSPREG00000017337rab25b7946.988
ENSPREG00000022167-7948.701ENSPREG00000009605rab11a7846.707
ENSPREG00000022167-8245.000ENSPREG00000021505rab6a8043.713
ENSPREG00000022167-8442.424ENSPREG00000017344-8640.860
ENSPREG00000022167-6230.645ENSPREG00000021315arl8bb6330.645
ENSPREG00000022167-9038.547ENSPREG00000017487rab127337.989
ENSPREG00000022167-8330.000ENSPREG00000008951rab34a6830.000
ENSPREG00000022167-7937.037ENSPREG00000012522-8236.095
ENSPREG00000022167-8740.782ENSPREG00000014888rab2a8340.782
ENSPREG00000022167-7730.061ENSPREG00000012803rhebl18830.061
ENSPREG00000022167-8440.476ENSPREG00000012148RAB7A8340.462
ENSPREG00000022167-8546.061ENSPREG00000017324rab11al8045.402
ENSPREG00000022167-8436.216ENSPREG00000000880rab33ba7836.757
ENSPREG00000022167-6130.328ENSPREG00000004992arl8a6230.081
ENSPREG00000022167-9141.989ENSPREG00000015480rab6ba9143.386
ENSPREG00000022167-8231.915ENSPREG00000022509rab239533.000
ENSPREG00000022167-7948.701ENSPREG00000014269rab11bb7746.707
ENSPREG00000022167-8734.673ENSPREG00000014761rabl29134.673
ENSPREG00000022167-8055.128ENSPREG00000010920rab22a8753.254
ENSPREG00000022167-8331.098ENSPREG00000009813rab34b7431.383
ENSPREG00000022167-8992.896ENSPREG00000010146rab5c8889.691
ENSPREG00000022167-8536.310ENSPREG00000013962rab42a7836.686
ENSPREG00000022167-8543.636ENSPREG00000009535RAB418142.690
ENSPREG00000022167-8530.682ENSPREG00000006363rras8930.682
ENSPREG00000022167-7940.000ENSPREG00000007017zgc:1015597139.394
ENSPREG00000022167-7947.097ENSPREG00000003616rab1ba8245.455
ENSPREG00000022167-8644.706ENSPREG00000005923rab18a8041.709
ENSPREG00000022167-7938.217ENSPREG00000009597-7837.952
ENSPREG00000022167-7947.097ENSPREG00000014634rab308245.509
ENSPREG00000022167-7948.701ENSPREG00000006336-7746.707
ENSPREG00000022167-8431.609ENSPREG00000019341hrasb9131.609
ENSPREG00000022167-8541.566ENSPREG00000010154rab4a8043.275
ENSPREG00000022167-8233.146ENSPREG00000020276RAB298533.146
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPREG00000022167-8993.989ENSG00000108774RAB5C10095.200Homo_sapiens
ENSPREG00000022167-8993.989ENSAPOG00000016864rab5c8592.593Acanthochromis_polyacanthus
ENSPREG00000022167-8993.989ENSAMEG00000006003RAB5C8792.593Ailuropoda_melanoleuca
ENSPREG00000022167-8992.350ENSACIG00000010896rab5c8591.005Amphilophus_citrinellus
ENSPREG00000022167-8993.989ENSAOCG00000016614rab5c8592.593Amphiprion_ocellaris
ENSPREG00000022167-8695.833ENSAPEG00000017868-8591.398Amphiprion_percula
ENSPREG00000022167-8993.443ENSATEG00000001937rab5c8692.063Anabas_testudineus
ENSPREG00000022167-8993.443ENSANAG00000025390RAB5C9292.063Aotus_nancymaae
ENSPREG00000022167-8996.739ENSACLG00000008615-8694.737Astatotilapia_calliptera
ENSPREG00000022167-8991.803ENSACLG00000002706rab5c8491.398Astatotilapia_calliptera
ENSPREG00000022167-8694.643ENSAMXG00000037267-8691.758Astyanax_mexicanus
ENSPREG00000022167-8993.478ENSAMXG00000043717rab5c8890.256Astyanax_mexicanus
ENSPREG00000022167-8993.443ENSBTAG00000006982RAB5C8792.063Bos_taurus
ENSPREG00000022167-8783.529WBGene00004268rab-58781.421Caenorhabditis_elegans
ENSPREG00000022167-8993.989ENSCAFG00000015629RAB5C8792.593Canis_familiaris
ENSPREG00000022167-8993.989ENSCAFG00020013537RAB5C8792.593Canis_lupus_dingo
ENSPREG00000022167-8993.443ENSCHIG00000012960RAB5C8792.063Capra_hircus
ENSPREG00000022167-8993.989ENSTSYG00000030531RAB5C8792.593Carlito_syrichta
ENSPREG00000022167-8993.443ENSCCAG00000025940RAB5C8792.063Cebus_capucinus
ENSPREG00000022167-8993.989ENSCATG00000040873RAB5C8792.593Cercocebus_atys
ENSPREG00000022167-8993.443ENSCLAG00000016650RAB5C8792.063Chinchilla_lanigera
ENSPREG00000022167-8695.833ENSCHOG00000009886RAB5C10094.413Choloepus_hoffmanni
ENSPREG00000022167-8683.929ENSCING00000003340-8382.222Ciona_intestinalis
ENSPREG00000022167-9576.733ENSCSAVG00000000613-9981.595Ciona_savignyi
ENSPREG00000022167-8993.989ENSCGRG00001014226Rab5c8792.593Cricetulus_griseus_chok1gshd
ENSPREG00000022167-8993.989ENSCGRG00000007534Rab5c8792.593Cricetulus_griseus_crigri
ENSPREG00000022167-8993.443ENSCSEG00000017024rab5c8592.063Cynoglossus_semilaevis
ENSPREG00000022167-8994.536ENSCVAG00000009550rab5c8891.237Cyprinodon_variegatus
ENSPREG00000022167-8993.443ENSDNOG00000038853RAB5C8993.923Dasypus_novemcinctus
ENSPREG00000022167-8993.989ENSDORG00000006819Rab5c8792.593Dipodomys_ordii
ENSPREG00000022167-8880.702FBgn0014010Rab58676.842Drosophila_melanogaster
ENSPREG00000022167-9283.069ENSEBUG00000014794rab5c8685.246Eptatretus_burgeri
ENSPREG00000022167-8993.989ENSEASG00005009281RAB5C8792.593Equus_asinus_asinus
ENSPREG00000022167-8993.989ENSECAG00000025054RAB5C8792.593Equus_caballus
ENSPREG00000022167-8993.443ENSEEUG00000002790RAB5C8792.063Erinaceus_europaeus
ENSPREG00000022167-8991.803ENSELUG00000010439-8590.476Esox_lucius
ENSPREG00000022167-8993.989ENSELUG00000018516rab5c8593.548Esox_lucius
ENSPREG00000022167-8993.443ENSFCAG00000002148RAB5C8792.063Felis_catus
ENSPREG00000022167-8992.896ENSFDAG00000021541RAB5C8791.534Fukomys_damarensis
ENSPREG00000022167-8997.268ENSFHEG00000015268-8695.767Fundulus_heteroclitus
ENSPREG00000022167-8992.896ENSFHEG00000012117rab5c8889.691Fundulus_heteroclitus
ENSPREG00000022167-8992.350ENSGMOG00000015096rab5c8590.476Gadus_morhua
ENSPREG00000022167-8688.623ENSGMOG00000001876-9987.791Gadus_morhua
ENSPREG00000022167-8992.896ENSGAFG00000000884rab5c8889.691Gambusia_affinis
ENSPREG00000022167-9195.187ENSGAFG00000003642-8594.709Gambusia_affinis
ENSPREG00000022167-8992.350ENSGACG00000008659rab5c8591.005Gasterosteus_aculeatus
ENSPREG00000022167-8993.989ENSGGOG00000005472RAB5C8792.593Gorilla_gorilla
ENSPREG00000022167-8991.803ENSHBUG00000002014rab5c8491.398Haplochromis_burtoni
ENSPREG00000022167-8996.739ENSHBUG00000006823-8694.737Haplochromis_burtoni
ENSPREG00000022167-8992.350ENSHGLG00000012067RAB5C8791.005Heterocephalus_glaber_female
ENSPREG00000022167-8890.751ENSHCOG00000020238-8789.005Hippocampus_comes
ENSPREG00000022167-8994.022ENSHCOG00000004662rab5c8492.632Hippocampus_comes
ENSPREG00000022167-8791.716ENSIPUG00000020082rab5c8889.286Ictalurus_punctatus
ENSPREG00000022167-8993.989ENSSTOG00000006620RAB5C8792.593Ictidomys_tridecemlineatus
ENSPREG00000022167-8993.989ENSJJAG00000021181Rab5c8792.593Jaculus_jaculus
ENSPREG00000022167-8996.175ENSKMAG00000017417-8694.180Kryptolebias_marmoratus
ENSPREG00000022167-8992.350ENSKMAG00000020038rab5c8591.005Kryptolebias_marmoratus
ENSPREG00000022167-8996.175ENSLBEG00000010408-8694.709Labrus_bergylta
ENSPREG00000022167-8993.989ENSLBEG00000004128rab5c8592.593Labrus_bergylta
ENSPREG00000022167-8992.896ENSLOCG00000012566rab5c8891.534Lepisosteus_oculatus
ENSPREG00000022167-8993.989ENSMFAG00000039627RAB5C8792.593Macaca_fascicularis
ENSPREG00000022167-8993.989ENSMNEG00000000355RAB5C8792.593Macaca_nemestrina
ENSPREG00000022167-8993.989ENSMAMG00000016207-8692.593Mastacembelus_armatus
ENSPREG00000022167-8991.803ENSMAMG00000022322rab5c8590.476Mastacembelus_armatus
ENSPREG00000022167-8996.739ENSMZEG00005021090-8694.737Maylandia_zebra
ENSPREG00000022167-8991.803ENSMZEG00005022735rab5c8491.398Maylandia_zebra
ENSPREG00000022167-8993.989ENSMAUG00000015005Rab5c8792.593Mesocricetus_auratus
ENSPREG00000022167-8993.989ENSMICG00000041608RAB5C8792.593Microcebus_murinus
ENSPREG00000022167-8993.989ENSMOCG00000018531-8792.593Microtus_ochrogaster
ENSPREG00000022167-8992.896ENSMMOG00000020621rab5c8591.534Mola_mola
ENSPREG00000022167-8993.443ENSMALG00000022348-8692.063Monopterus_albus
ENSPREG00000022167-8689.286ENSMALG00000006052rab5c8684.456Monopterus_albus
ENSPREG00000022167-8993.989MGP_CAROLIEiJ_G0017184Rab5c8792.593Mus_caroli
ENSPREG00000022167-8993.989ENSMUSG00000019173Rab5c8792.593Mus_musculus
ENSPREG00000022167-8993.989MGP_PahariEiJ_G0018314Rab5c8792.593Mus_pahari
ENSPREG00000022167-8993.989MGP_SPRETEiJ_G0018027Rab5c8792.593Mus_spretus
ENSPREG00000022167-8993.989ENSMPUG00000010554RAB5C8792.593Mustela_putorius_furo
ENSPREG00000022167-8993.443ENSNGAG00000010286Rab5c8792.063Nannospalax_galili
ENSPREG00000022167-8996.739ENSNBRG00000016922-8694.737Neolamprologus_brichardi
ENSPREG00000022167-8992.350ENSNBRG00000018165rab5c8591.005Neolamprologus_brichardi
ENSPREG00000022167-8788.268ENSOPRG00000008255RAB5C10088.268Ochotona_princeps
ENSPREG00000022167-8992.896ENSODEG00000017920RAB5C8791.534Octodon_degus
ENSPREG00000022167-8992.350ENSONIG00000001113rab5c8591.005Oreochromis_niloticus
ENSPREG00000022167-8991.803ENSORLG00000003882rab5c8690.476Oryzias_latipes
ENSPREG00000022167-8991.803ENSORLG00020008388rab5c8690.476Oryzias_latipes_hni
ENSPREG00000022167-8991.803ENSORLG00015021900rab5c8690.476Oryzias_latipes_hsok
ENSPREG00000022167-8991.803ENSOMEG00000023078rab5c8690.476Oryzias_melastigma
ENSPREG00000022167-8993.989ENSOGAG00000009456RAB5C8792.593Otolemur_garnettii
ENSPREG00000022167-8993.443ENSOARG00000018768RAB5C8792.063Ovis_aries
ENSPREG00000022167-8993.989ENSPPAG00000037206RAB5C8792.593Pan_paniscus
ENSPREG00000022167-8993.443ENSPPRG00000005745RAB5C8792.063Panthera_pardus
ENSPREG00000022167-8993.443ENSPTIG00000008177RAB5C8792.063Panthera_tigris_altaica
ENSPREG00000022167-8993.989ENSPTRG00000009194RAB5C8792.593Pan_troglodytes
ENSPREG00000022167-9586.598ENSPKIG00000001237-8987.113Paramormyrops_kingsleyae
ENSPREG00000022167-9586.000ENSPKIG00000020112-9286.000Paramormyrops_kingsleyae
ENSPREG00000022167-8694.643ENSPMGG00000010792rab5c8491.257Periophthalmus_magnuspinnatus
ENSPREG00000022167-8993.989ENSPEMG00000017971Rab5c8792.593Peromyscus_maniculatus_bairdii
ENSPREG00000022167-9083.069ENSPMAG00000007867rab5c8983.069Petromyzon_marinus
ENSPREG00000022167-9877.990ENSPMAG00000001399rab5c9977.990Petromyzon_marinus
ENSPREG00000022167-9182.812ENSPMAG00000000008rab5c8783.246Petromyzon_marinus
ENSPREG00000022167-8992.896ENSPCIG00000020225-8791.534Phascolarctos_cinereus
ENSPREG00000022167-8992.896ENSPLAG00000004790rab5c8889.691Poecilia_latipinna
ENSPREG00000022167-9196.791ENSPLAG00000016333-8796.296Poecilia_latipinna
ENSPREG00000022167-9197.326ENSPMEG00000012614-8596.825Poecilia_mexicana
ENSPREG00000022167-8992.896ENSPMEG00000011336rab5c8889.691Poecilia_mexicana
ENSPREG00000022167-8993.989ENSPPYG00000008398RAB5C8792.593Pongo_abelii
ENSPREG00000022167-8992.896ENSPCAG00000016412RAB5C8791.534Procavia_capensis
ENSPREG00000022167-8993.443ENSPCOG00000026327RAB5C8792.063Propithecus_coquereli
ENSPREG00000022167-8993.989ENSPVAG00000003867RAB5C8792.593Pteropus_vampyrus
ENSPREG00000022167-8996.739ENSPNYG00000015851-8694.737Pundamilia_nyererei
ENSPREG00000022167-8991.803ENSPNYG00000010615rab5c8491.398Pundamilia_nyererei
ENSPREG00000022167-9589.231ENSPNAG00000028138rab5c8890.256Pygocentrus_nattereri
ENSPREG00000022167-8694.643ENSPNAG00000002218-8591.758Pygocentrus_nattereri
ENSPREG00000022167-8993.989ENSRNOG00000018568Rab5c8792.593Rattus_norvegicus
ENSPREG00000022167-8993.989ENSRBIG00000031376RAB5C8792.593Rhinopithecus_bieti
ENSPREG00000022167-8993.989ENSRROG00000032895RAB5C8792.593Rhinopithecus_roxellana
ENSPREG00000022167-8993.443ENSSBOG00000032552-8792.063Saimiri_boliviensis_boliviensis
ENSPREG00000022167-8993.443ENSSHAG00000005267-8792.063Sarcophilus_harrisii
ENSPREG00000022167-9583.505ENSSFOG00015009988-8884.021Scleropages_formosus
ENSPREG00000022167-8992.896ENSSMAG00000007323rab5c8591.534Scophthalmus_maximus
ENSPREG00000022167-8993.443ENSSDUG00000023008rab5c8592.063Seriola_dumerili
ENSPREG00000022167-8992.896ENSSLDG00000017771rab5c8591.534Seriola_lalandi_dorsalis
ENSPREG00000022167-8993.443ENSSPUG00000012950-8792.063Sphenodon_punctatus
ENSPREG00000022167-8993.443ENSSPAG00000006436rab5c8592.063Stegastes_partitus
ENSPREG00000022167-8993.443ENSSSCG00000032467RAB5C8792.063Sus_scrofa
ENSPREG00000022167-8991.803ENSTRUG00000015590rab5c8590.476Takifugu_rubripes
ENSPREG00000022167-8694.643ENSTNIG00000011711rab5c8589.840Tetraodon_nigroviridis
ENSPREG00000022167-8993.989ENSTBEG00000007092RAB5C8792.593Tupaia_belangeri
ENSPREG00000022167-8993.443ENSTTRG00000006673RAB5C8792.063Tursiops_truncatus
ENSPREG00000022167-8993.989ENSUAMG00000024343RAB5C8792.593Ursus_americanus
ENSPREG00000022167-8993.989ENSUMAG00000023270RAB5C8792.593Ursus_maritimus
ENSPREG00000022167-8992.896ENSXCOG00000016788rab5c8591.534Xiphophorus_couchianus
ENSPREG00000022167-9196.791ENSXCOG00000006300-8596.296Xiphophorus_couchianus
ENSPREG00000022167-9196.791ENSXMAG00000022179-8796.296Xiphophorus_maculatus
ENSPREG00000022167-8992.896ENSXMAG00000003266rab5c8889.691Xiphophorus_maculatus

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