EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000022241 (Gene tree)
Gene ID: 103465551
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 1717 bases
Position: chrLG5:30991639-30993355
Accession: 103465551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000032797	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000033170	-	615	XM_008410517	ENSPREP00000032797	204 (aa)	XP_008408739	UPI0004A33AB6

Gene Model

Click here to download ENSPREG00000022241's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret04137	Mitophagy - animal	KEGG
pret04140	Autophagy - animal	KEGG
pret04144	Endocytosis	KEGG
pret04145	Phagosome	KEGG
pret05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000022241	si:dkey-13a21.4	71	30.345	ENSPREG00000019341	hrasb	80	31.410
ENSPREG00000022241	si:dkey-13a21.4	67	30.147	ENSPREG00000018287	KRAS	80	30.769
ENSPREG00000022241	si:dkey-13a21.4	77	36.478	ENSPREG00000009597	-	73	36.478
ENSPREG00000022241	si:dkey-13a21.4	81	52.410	ENSPREG00000001832	rab9a	82	52.410
ENSPREG00000022241	si:dkey-13a21.4	90	38.919	ENSPREG00000014634	rab30	89	38.919
ENSPREG00000022241	si:dkey-13a21.4	79	35.185	ENSPREG00000009535	RAB41	75	35.185
ENSPREG00000022241	si:dkey-13a21.4	79	35.583	ENSPREG00000010146	rab5c	72	35.583
ENSPREG00000022241	si:dkey-13a21.4	56	33.621	ENSPREG00000016664	rap2b	88	34.646
ENSPREG00000022241	si:dkey-13a21.4	79	31.707	ENSPREG00000010752	rheb	87	31.707
ENSPREG00000022241	si:dkey-13a21.4	81	31.138	ENSPREG00000017010	rasd4	77	31.138
ENSPREG00000022241	si:dkey-13a21.4	73	36.129	ENSPREG00000001864	-	66	36.129
ENSPREG00000022241	si:dkey-13a21.4	77	34.177	ENSPREG00000006119	rab25a	73	36.066
ENSPREG00000022241	si:dkey-13a21.4	77	34.177	ENSPREG00000006357	rab11ba	55	34.177
ENSPREG00000022241	si:dkey-13a21.4	82	36.310	ENSPREG00000017567	rab13	82	36.310
ENSPREG00000022241	si:dkey-13a21.4	83	35.294	ENSPREG00000017337	rab25b	79	35.294
ENSPREG00000022241	si:dkey-13a21.4	77	36.875	ENSPREG00000007129	RAB39B	74	36.875
ENSPREG00000022241	si:dkey-13a21.4	87	53.371	ENSPREG00000012148	RAB7A	86	53.371
ENSPREG00000022241	si:dkey-13a21.4	83	50.877	ENSPREG00000006970	rab9b	78	50.877
ENSPREG00000022241	si:dkey-13a21.4	96	32.338	ENSPREG00000021505	rab6a	94	32.338
ENSPREG00000022241	si:dkey-13a21.4	80	38.182	ENSPREG00000020321	rab1ab	79	38.182
ENSPREG00000022241	si:dkey-13a21.4	96	33.824	ENSPREG00000003221	rab33a	58	33.824
ENSPREG00000022241	si:dkey-13a21.4	77	31.210	ENSPREG00000014761	rabl2	74	31.210
ENSPREG00000022241	si:dkey-13a21.4	80	36.364	ENSPREG00000003616	rab1ba	80	36.364
ENSPREG00000022241	si:dkey-13a21.4	97	50.249	ENSPREG00000017750	RAB7A	97	50.249
ENSPREG00000022241	si:dkey-13a21.4	86	34.078	ENSPREG00000009813	rab34b	69	34.078
ENSPREG00000022241	si:dkey-13a21.4	72	35.570	ENSPREG00000008951	rab34a	59	35.570
ENSPREG00000022241	si:dkey-13a21.4	79	36.810	ENSPREG00000014888	rab2a	75	36.810
ENSPREG00000022241	si:dkey-13a21.4	80	40.000	ENSPREG00000017517	zgc:171927	75	40.000
ENSPREG00000022241	si:dkey-13a21.4	77	35.443	ENSPREG00000009605	rab11a	72	35.443
ENSPREG00000022241	si:dkey-13a21.4	79	50.617	ENSPREG00000012522	-	81	50.617
ENSPREG00000022241	si:dkey-13a21.4	84	36.994	ENSPREG00000004889	-	81	36.994
ENSPREG00000022241	si:dkey-13a21.4	84	35.838	ENSPREG00000010284	rab15	79	35.838
ENSPREG00000022241	si:dkey-13a21.4	74	30.818	ENSPREG00000019386	rasl11b	62	30.818
ENSPREG00000022241	si:dkey-13a21.4	79	33.951	ENSPREG00000022167	-	79	33.962
ENSPREG00000022241	si:dkey-13a21.4	77	34.177	ENSPREG00000006336	-	71	34.177
ENSPREG00000022241	si:dkey-13a21.4	84	36.416	ENSPREG00000005323	si:dkey-16l2.16	80	36.416
ENSPREG00000022241	si:dkey-13a21.4	97	31.731	ENSPREG00000019783	RAB15	97	31.731
ENSPREG00000022241	si:dkey-13a21.4	95	34.021	ENSPREG00000010920	rab22a	97	34.021
ENSPREG00000022241	si:dkey-13a21.4	79	32.927	ENSPREG00000020276	RAB29	80	32.927
ENSPREG00000022241	si:dkey-13a21.4	77	37.736	ENSPREG00000013962	rab42a	72	37.736
ENSPREG00000022241	si:dkey-13a21.4	76	34.395	ENSPREG00000010228	dnajc27	81	34.395
ENSPREG00000022241	si:dkey-13a21.4	80	33.939	ENSPREG00000017324	rab11al	75	33.939
ENSPREG00000022241	si:dkey-13a21.4	76	39.103	ENSPREG00000005923	rab18a	62	39.103
ENSPREG00000022241	si:dkey-13a21.4	79	33.537	ENSPREG00000017487	rab12	66	33.537
ENSPREG00000022241	si:dkey-13a21.4	75	36.538	ENSPREG00000007017	zgc:101559	65	36.538
ENSPREG00000022241	si:dkey-13a21.4	83	36.471	ENSPREG00000010154	rab4a	78	36.471
ENSPREG00000022241	si:dkey-13a21.4	73	37.333	ENSPREG00000000880	rab33ba	62	37.333
ENSPREG00000022241	si:dkey-13a21.4	75	30.323	ENSPREG00000012803	rhebl1	82	30.323
ENSPREG00000022241	si:dkey-13a21.4	91	31.383	ENSPREG00000015480	rab6ba	89	31.383
ENSPREG00000022241	si:dkey-13a21.4	79	37.423	ENSPREG00000022509	rab23	77	37.423
ENSPREG00000022241	si:dkey-13a21.4	87	32.222	ENSPREG00000014269	rab11bb	81	32.222
ENSPREG00000022241	si:dkey-13a21.4	79	36.585	ENSPREG00000017344	-	74	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022241	si:dkey-13a21.4	100	81.373	ENSACIG00000011024	si:dkey-13a21.4	100	81.373	Amphilophus_citrinellus
ENSPREG00000022241	si:dkey-13a21.4	100	80.882	ENSAOCG00000020491	si:dkey-13a21.4	100	80.882	Amphiprion_ocellaris
ENSPREG00000022241	si:dkey-13a21.4	100	80.882	ENSAPEG00000023338	si:dkey-13a21.4	92	80.882	Amphiprion_percula
ENSPREG00000022241	si:dkey-13a21.4	100	78.922	ENSATEG00000014958	si:dkey-13a21.4	100	78.922	Anabas_testudineus
ENSPREG00000022241	si:dkey-13a21.4	96	51.282	ENSACAG00000012345	-	97	51.282	Anolis_carolinensis
ENSPREG00000022241	si:dkey-13a21.4	100	82.353	ENSACLG00000021109	si:dkey-13a21.4	99	82.353	Astatotilapia_calliptera
ENSPREG00000022241	si:dkey-13a21.4	100	51.185	ENSAMXG00000032663	si:dkey-13a21.4	97	51.185	Astyanax_mexicanus
ENSPREG00000022241	si:dkey-13a21.4	89	52.459	WBGene00004271	rab-7	100	47.847	Caenorhabditis_elegans
ENSPREG00000022241	si:dkey-13a21.4	100	90.196	ENSCVAG00000001150	si:dkey-13a21.4	100	90.196	Cyprinodon_variegatus
ENSPREG00000022241	si:dkey-13a21.4	100	61.765	ENSDARG00000026098	si:dkey-13a21.4	99	61.765	Danio_rerio
ENSPREG00000022241	si:dkey-13a21.4	87	50.000	ENSDNOG00000043559	-	96	47.475	Dasypus_novemcinctus
ENSPREG00000022241	si:dkey-13a21.4	100	86.341	ENSFHEG00000002502	si:dkey-13a21.4	100	86.341	Fundulus_heteroclitus
ENSPREG00000022241	si:dkey-13a21.4	100	95.588	ENSGAFG00000020102	si:dkey-13a21.4	100	95.588	Gambusia_affinis
ENSPREG00000022241	si:dkey-13a21.4	100	82.843	ENSHBUG00000014023	si:dkey-13a21.4	99	82.843	Haplochromis_burtoni
ENSPREG00000022241	si:dkey-13a21.4	85	79.310	ENSKMAG00000021039	si:dkey-13a21.4	73	79.310	Kryptolebias_marmoratus
ENSPREG00000022241	si:dkey-13a21.4	100	82.353	ENSLBEG00000018180	si:dkey-13a21.4	100	82.353	Labrus_bergylta
ENSPREG00000022241	si:dkey-13a21.4	96	60.406	ENSLOCG00000014749	si:dkey-13a21.4	96	60.406	Lepisosteus_oculatus
ENSPREG00000022241	si:dkey-13a21.4	84	55.556	ENSLAFG00000028984	-	83	55.556	Loxodonta_africana
ENSPREG00000022241	si:dkey-13a21.4	100	80.392	ENSMAMG00000021095	si:dkey-13a21.4	100	80.392	Mastacembelus_armatus
ENSPREG00000022241	si:dkey-13a21.4	100	82.353	ENSMZEG00005010220	si:dkey-13a21.4	99	82.353	Maylandia_zebra
ENSPREG00000022241	si:dkey-13a21.4	99	82.673	ENSNBRG00000023214	si:dkey-13a21.4	98	82.673	Neolamprologus_brichardi
ENSPREG00000022241	si:dkey-13a21.4	100	82.353	ENSONIG00000020296	si:dkey-13a21.4	100	82.353	Oreochromis_niloticus
ENSPREG00000022241	si:dkey-13a21.4	100	78.431	ENSORLG00000025098	si:dkey-13a21.4	100	78.431	Oryzias_latipes
ENSPREG00000022241	si:dkey-13a21.4	100	78.922	ENSORLG00020019465	si:dkey-13a21.4	100	78.922	Oryzias_latipes_hni
ENSPREG00000022241	si:dkey-13a21.4	100	78.922	ENSORLG00015015121	si:dkey-13a21.4	100	78.922	Oryzias_latipes_hsok
ENSPREG00000022241	si:dkey-13a21.4	96	61.929	ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	Paramormyrops_kingsleyae
ENSPREG00000022241	si:dkey-13a21.4	100	74.020	ENSPMGG00000023170	si:dkey-13a21.4	97	74.020	Periophthalmus_magnuspinnatus
ENSPREG00000022241	si:dkey-13a21.4	100	97.549	ENSPFOG00000015409	si:dkey-13a21.4	100	97.549	Poecilia_formosa
ENSPREG00000022241	si:dkey-13a21.4	100	97.549	ENSPLAG00000019688	si:dkey-13a21.4	100	97.549	Poecilia_latipinna
ENSPREG00000022241	si:dkey-13a21.4	100	97.549	ENSPMEG00000019159	si:dkey-13a21.4	100	97.549	Poecilia_mexicana
ENSPREG00000022241	si:dkey-13a21.4	100	82.353	ENSPNYG00000018613	si:dkey-13a21.4	99	82.353	Pundamilia_nyererei
ENSPREG00000022241	si:dkey-13a21.4	96	42.786	YML001W	YPT7	96	42.786	Saccharomyces_cerevisiae
ENSPREG00000022241	si:dkey-13a21.4	96	60.714	ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	Scleropages_formosus
ENSPREG00000022241	si:dkey-13a21.4	97	80.808	ENSSMAG00000013945	si:dkey-13a21.4	96	80.808	Scophthalmus_maximus
ENSPREG00000022241	si:dkey-13a21.4	100	82.843	ENSSDUG00000019738	si:dkey-13a21.4	100	82.843	Seriola_dumerili
ENSPREG00000022241	si:dkey-13a21.4	100	82.843	ENSSLDG00000011597	si:dkey-13a21.4	100	82.843	Seriola_lalandi_dorsalis
ENSPREG00000022241	si:dkey-13a21.4	96	53.333	ENSXETG00000014257	mgc75872	97	53.333	Xenopus_tropicalis