EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000022256 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3133 bases
Position: chrLG9:22452066-22455198
Accession: ZDB-GENE-060526-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000032822	Glu-tRNAGln	PF02686.15	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000033197	-	447	-	ENSPREP00000032822	148 (aa)	-	-

Gene Model

Click here to download ENSPREG00000022256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022256	gatc	89	57.252	ENSG00000257218	GATC	100	70.213	Homo_sapiens
ENSPREG00000022256	gatc	89	56.489	ENSAMEG00000013298	-	80	61.468	Ailuropoda_melanoleuca
ENSPREG00000022256	gatc	63	87.097	ENSACIG00000016853	gatc	67	87.097	Amphilophus_citrinellus
ENSPREG00000022256	gatc	75	90.090	ENSAOCG00000014641	gatc	89	90.090	Amphiprion_ocellaris
ENSPREG00000022256	gatc	75	89.189	ENSAPEG00000023411	gatc	57	89.189	Amphiprion_percula
ENSPREG00000022256	gatc	63	90.323	ENSATEG00000009237	gatc	77	90.323	Anabas_testudineus
ENSPREG00000022256	gatc	72	70.093	ENSACAG00000002868	-	79	70.093	Anolis_carolinensis
ENSPREG00000022256	gatc	82	59.016	ENSANAG00000034389	-	80	61.468	Aotus_nancymaae
ENSPREG00000022256	gatc	75	83.784	ENSACLG00000026251	gatc	58	83.784	Astatotilapia_calliptera
ENSPREG00000022256	gatc	89	54.198	ENSBTAG00000012791	GATC	80	57.798	Bos_taurus
ENSPREG00000022256	gatc	66	39.796	WBGene00013433	Y66D12A.7	56	39.796	Caenorhabditis_elegans
ENSPREG00000022256	gatc	82	59.016	ENSCJAG00000001183	-	60	61.468	Callithrix_jacchus
ENSPREG00000022256	gatc	82	59.016	ENSCAFG00000010311	-	80	62.385	Canis_familiaris
ENSPREG00000022256	gatc	82	59.016	ENSCAFG00020020606	-	80	62.385	Canis_lupus_dingo
ENSPREG00000022256	gatc	93	52.555	ENSCHIG00000019423	-	85	55.652	Capra_hircus
ENSPREG00000022256	gatc	82	59.016	ENSTSYG00000006845	-	80	60.550	Carlito_syrichta
ENSPREG00000022256	gatc	60	64.045	ENSCPOG00000026436	-	65	61.053	Cavia_porcellus
ENSPREG00000022256	gatc	89	56.489	ENSCCAG00000022235	-	80	61.468	Cebus_capucinus
ENSPREG00000022256	gatc	89	57.252	ENSCATG00000038807	GATC	80	61.468	Cercocebus_atys
ENSPREG00000022256	gatc	68	61.386	ENSCLAG00000011015	-	64	61.386	Chinchilla_lanigera
ENSPREG00000022256	gatc	89	58.015	ENSCSAG00000002259	GATC	80	62.385	Chlorocebus_sabaeus
ENSPREG00000022256	gatc	76	58.407	ENSCHOG00000009235	-	80	59.633	Choloepus_hoffmanni
ENSPREG00000022256	gatc	78	65.517	ENSCPBG00000011342	-	62	65.517	Chrysemys_picta_bellii
ENSPREG00000022256	gatc	89	56.489	ENSCANG00000031071	GATC	80	60.550	Colobus_angolensis_palliatus
ENSPREG00000022256	gatc	88	52.174	ENSCGRG00001019220	-	68	60.952	Cricetulus_griseus_chok1gshd
ENSPREG00000022256	gatc	88	52.174	ENSCGRG00000004184	-	68	60.952	Cricetulus_griseus_crigri
ENSPREG00000022256	gatc	80	72.034	ENSCSEG00000016618	-	69	72.034	Cynoglossus_semilaevis
ENSPREG00000022256	gatc	74	80.734	ENSCSEG00000007798	gatc	55	80.734	Cynoglossus_semilaevis
ENSPREG00000022256	gatc	75	96.396	ENSCVAG00000004364	gatc	59	96.396	Cyprinodon_variegatus
ENSPREG00000022256	gatc	74	80.909	ENSDARG00000056855	gatc	60	80.909	Danio_rerio
ENSPREG00000022256	gatc	67	62.626	ENSDNOG00000012593	-	58	60.000	Dasypus_novemcinctus
ENSPREG00000022256	gatc	64	47.872	FBgn0064115	GatC	64	47.872	Drosophila_melanogaster
ENSPREG00000022256	gatc	78	50.000	ENSETEG00000002604	-	80	50.459	Echinops_telfairi
ENSPREG00000022256	gatc	69	50.000	ENSEBUG00000008772	gatc	58	50.000	Eptatretus_burgeri
ENSPREG00000022256	gatc	89	54.962	ENSECAG00000011118	-	79	61.111	Equus_caballus
ENSPREG00000022256	gatc	82	53.719	ENSEEUG00000011638	-	76	57.282	Erinaceus_europaeus
ENSPREG00000022256	gatc	74	72.973	ENSELUG00000012608	gatc	80	73.636	Esox_lucius
ENSPREG00000022256	gatc	89	55.725	ENSFCAG00000038718	-	80	60.550	Felis_catus
ENSPREG00000022256	gatc	83	60.317	ENSFALG00000007564	-	81	60.976	Ficedula_albicollis
ENSPREG00000022256	gatc	93	57.971	ENSFDAG00000018720	-	85	62.069	Fukomys_damarensis
ENSPREG00000022256	gatc	75	94.595	ENSFHEG00000014992	GATC	60	94.595	Fundulus_heteroclitus
ENSPREG00000022256	gatc	76	75.221	ENSGMOG00000008742	gatc	70	75.221	Gadus_morhua
ENSPREG00000022256	gatc	72	63.208	ENSGALG00000007195	-	76	63.208	Gallus_gallus
ENSPREG00000022256	gatc	82	80.328	ENSGAFG00000012801	gatc	59	95.789	Gambusia_affinis
ENSPREG00000022256	gatc	75	87.387	ENSGACG00000008973	gatc	57	87.387	Gasterosteus_aculeatus
ENSPREG00000022256	gatc	82	61.069	ENSGAGG00000016018	-	64	66.379	Gopherus_agassizii
ENSPREG00000022256	gatc	82	56.557	ENSGGOG00000026821	GATC	78	61.000	Gorilla_gorilla
ENSPREG00000022256	gatc	75	84.685	ENSHBUG00000006827	gatc	58	84.685	Haplochromis_burtoni
ENSPREG00000022256	gatc	93	56.522	ENSHGLG00000011394	GATC	85	61.207	Heterocephalus_glaber_female
ENSPREG00000022256	gatc	93	55.072	ENSHGLG00100018850	-	84	59.483	Heterocephalus_glaber_male
ENSPREG00000022256	gatc	72	84.906	ENSHCOG00000009209	gatc	84	84.906	Hippocampus_comes
ENSPREG00000022256	gatc	75	80.180	ENSIPUG00000023072	gatc	56	80.180	Ictalurus_punctatus
ENSPREG00000022256	gatc	78	59.483	ENSSTOG00000025740	-	71	60.185	Ictidomys_tridecemlineatus
ENSPREG00000022256	gatc	91	53.731	ENSJJAG00000000369	Gatc	65	63.107	Jaculus_jaculus
ENSPREG00000022256	gatc	77	77.869	ENSKMAG00000016476	gatc	98	77.869	Kryptolebias_marmoratus
ENSPREG00000022256	gatc	80	82.203	ENSLBEG00000007603	gatc	65	82.203	Labrus_bergylta
ENSPREG00000022256	gatc	86	58.140	ENSLACG00000018239	-	51	68.687	Latimeria_chalumnae
ENSPREG00000022256	gatc	75	76.577	ENSLOCG00000004056	gatc	60	76.577	Lepisosteus_oculatus
ENSPREG00000022256	gatc	64	63.158	ENSLAFG00000006384	-	62	63.158	Loxodonta_africana
ENSPREG00000022256	gatc	89	57.252	ENSMFAG00000034197	GATC	80	61.468	Macaca_fascicularis
ENSPREG00000022256	gatc	89	57.252	ENSMMUG00000046665	GATC	80	61.468	Macaca_mulatta
ENSPREG00000022256	gatc	89	57.252	ENSMNEG00000034653	GATC	80	61.468	Macaca_nemestrina
ENSPREG00000022256	gatc	89	58.015	ENSMLEG00000039862	GATC	80	62.385	Mandrillus_leucophaeus
ENSPREG00000022256	gatc	75	90.090	ENSMAMG00000015851	gatc	62	89.286	Mastacembelus_armatus
ENSPREG00000022256	gatc	75	83.784	ENSMZEG00005016072	gatc	58	83.784	Maylandia_zebra
ENSPREG00000022256	gatc	88	57.692	ENSMGAG00000008733	-	100	65.094	Meleagris_gallopavo
ENSPREG00000022256	gatc	88	52.899	ENSMAUG00000012756	Gatc	61	65.263	Mesocricetus_auratus
ENSPREG00000022256	gatc	89	58.779	ENSMICG00000008669	-	80	62.385	Microcebus_murinus
ENSPREG00000022256	gatc	80	55.833	ENSMOCG00000005051	Gatc	65	61.386	Microtus_ochrogaster
ENSPREG00000022256	gatc	74	81.818	ENSMMOG00000017695	gatc	92	81.818	Mola_mola
ENSPREG00000022256	gatc	88	54.198	ENSMODG00000003152	-	83	59.633	Monodelphis_domestica
ENSPREG00000022256	gatc	68	62.000	MGP_CAROLIEiJ_G0027623	Gatc	65	62.000	Mus_caroli
ENSPREG00000022256	gatc	81	52.308	ENSMUSG00000029536	Gatc	65	62.000	Mus_musculus
ENSPREG00000022256	gatc	82	53.030	MGP_PahariEiJ_G0024203	Gatc	65	63.000	Mus_pahari
ENSPREG00000022256	gatc	81	51.538	MGP_SPRETEiJ_G0028621	Gatc	65	61.000	Mus_spretus
ENSPREG00000022256	gatc	82	59.836	ENSMPUG00000003183	-	80	62.385	Mustela_putorius_furo
ENSPREG00000022256	gatc	64	61.053	ENSMLUG00000010341	-	94	61.053	Myotis_lucifugus
ENSPREG00000022256	gatc	87	52.239	ENSNGAG00000004734	Gatc	61	64.516	Nannospalax_galili
ENSPREG00000022256	gatc	75	84.685	ENSNBRG00000007810	gatc	58	84.685	Neolamprologus_brichardi
ENSPREG00000022256	gatc	82	58.197	ENSNLEG00000015651	GATC	80	60.550	Nomascus_leucogenys
ENSPREG00000022256	gatc	76	59.821	ENSMEUG00000004064	-	85	61.682	Notamacropus_eugenii
ENSPREG00000022256	gatc	89	54.887	ENSOPRG00000004226	-	95	54.962	Ochotona_princeps
ENSPREG00000022256	gatc	74	56.522	ENSODEG00000005919	-	66	65.556	Octodon_degus
ENSPREG00000022256	gatc	75	82.301	ENSONIG00000013444	gatc	78	82.301	Oreochromis_niloticus
ENSPREG00000022256	gatc	91	55.224	ENSOCUG00000009867	-	82	58.929	Oryctolagus_cuniculus
ENSPREG00000022256	gatc	80	79.661	ENSORLG00000007156	gatc	98	79.661	Oryzias_latipes
ENSPREG00000022256	gatc	80	78.814	ENSORLG00020014991	gatc	63	78.814	Oryzias_latipes_hni
ENSPREG00000022256	gatc	80	79.661	ENSORLG00015003450	gatc	63	79.661	Oryzias_latipes_hsok
ENSPREG00000022256	gatc	75	82.883	ENSOMEG00000002280	gatc	59	82.883	Oryzias_melastigma
ENSPREG00000022256	gatc	71	61.905	ENSOGAG00000003850	-	96	61.905	Otolemur_garnettii
ENSPREG00000022256	gatc	75	55.856	ENSOARG00000012338	-	86	55.856	Ovis_aries
ENSPREG00000022256	gatc	89	57.252	ENSPPAG00000029164	GATC	80	61.468	Pan_paniscus
ENSPREG00000022256	gatc	89	55.725	ENSPPRG00000000929	-	80	60.550	Panthera_pardus
ENSPREG00000022256	gatc	89	55.725	ENSPTIG00000009889	-	80	60.550	Panthera_tigris_altaica
ENSPREG00000022256	gatc	89	56.489	ENSPTRG00000049887	GATC	81	61.468	Pan_troglodytes
ENSPREG00000022256	gatc	89	56.489	ENSPANG00000033975	GATC	80	60.550	Papio_anubis
ENSPREG00000022256	gatc	76	73.214	ENSPKIG00000024856	gatc	58	73.214	Paramormyrops_kingsleyae
ENSPREG00000022256	gatc	78	64.655	ENSPSIG00000011112	-	99	64.655	Pelodiscus_sinensis
ENSPREG00000022256	gatc	75	83.784	ENSPMGG00000018829	gatc	71	83.784	Periophthalmus_magnuspinnatus
ENSPREG00000022256	gatc	64	67.021	ENSPEMG00000000665	Gatc	65	64.000	Peromyscus_maniculatus_bairdii
ENSPREG00000022256	gatc	66	61.856	ENSPCIG00000025999	-	63	61.856	Phascolarctos_cinereus
ENSPREG00000022256	gatc	75	97.297	ENSPFOG00000011603	gatc	60	97.297	Poecilia_formosa
ENSPREG00000022256	gatc	75	96.396	ENSPLAG00000002471	gatc	60	96.396	Poecilia_latipinna
ENSPREG00000022256	gatc	75	96.396	ENSPMEG00000020958	gatc	60	96.396	Poecilia_mexicana
ENSPREG00000022256	gatc	93	55.797	ENSPPYG00000005030	GATC	85	60.345	Pongo_abelii
ENSPREG00000022256	gatc	89	55.725	ENSPCAG00000013864	-	80	59.633	Procavia_capensis
ENSPREG00000022256	gatc	75	55.856	ENSPCOG00000015558	-	76	58.163	Propithecus_coquereli
ENSPREG00000022256	gatc	82	57.851	ENSPCOG00000009493	-	77	61.616	Propithecus_coquereli
ENSPREG00000022256	gatc	80	61.864	ENSPVAG00000002228	-	78	63.810	Pteropus_vampyrus
ENSPREG00000022256	gatc	75	84.685	ENSPNYG00000016015	gatc	58	84.685	Pundamilia_nyererei
ENSPREG00000022256	gatc	75	76.577	ENSPNAG00000001239	gatc	50	76.577	Pygocentrus_nattereri
ENSPREG00000022256	gatc	64	66.316	ENSRNOG00000001161	Gatc	65	64.000	Rattus_norvegicus
ENSPREG00000022256	gatc	78	56.780	ENSRNOG00000045621	Gatc	64	61.224	Rattus_norvegicus
ENSPREG00000022256	gatc	89	55.725	ENSRBIG00000033363	GATC	80	59.633	Rhinopithecus_bieti
ENSPREG00000022256	gatc	89	55.725	ENSRROG00000042802	GATC	80	59.633	Rhinopithecus_roxellana
ENSPREG00000022256	gatc	89	54.198	ENSSBOG00000033750	-	74	63.000	Saimiri_boliviensis_boliviensis
ENSPREG00000022256	gatc	72	61.321	ENSSHAG00000005745	-	100	61.321	Sarcophilus_harrisii
ENSPREG00000022256	gatc	75	77.477	ENSSFOG00015002508	gatc	58	77.477	Scleropages_formosus
ENSPREG00000022256	gatc	75	90.991	ENSSMAG00000014280	gatc	62	90.991	Scophthalmus_maximus
ENSPREG00000022256	gatc	75	88.288	ENSSDUG00000012206	gatc	57	88.288	Seriola_dumerili
ENSPREG00000022256	gatc	75	88.288	ENSSLDG00000025159	gatc	56	88.288	Seriola_lalandi_dorsalis
ENSPREG00000022256	gatc	89	55.714	ENSSPUG00000015693	-	80	62.162	Sphenodon_punctatus
ENSPREG00000022256	gatc	75	88.288	ENSSPAG00000011860	gatc	58	88.288	Stegastes_partitus
ENSPREG00000022256	gatc	82	58.678	ENSSSCG00000032747	-	72	64.646	Sus_scrofa
ENSPREG00000022256	gatc	72	67.290	ENSTGUG00000009561	-	99	67.290	Taeniopygia_guttata
ENSPREG00000022256	gatc	76	85.217	ENSTRUG00000021596	gatc	56	87.273	Takifugu_rubripes
ENSPREG00000022256	gatc	74	86.239	ENSTNIG00000015879	gatc	53	86.239	Tetraodon_nigroviridis
ENSPREG00000022256	gatc	89	58.015	ENSTTRG00000000144	GATC	80	61.468	Tursiops_truncatus
ENSPREG00000022256	gatc	89	57.252	ENSUAMG00000015523	-	80	62.385	Ursus_americanus
ENSPREG00000022256	gatc	85	57.937	ENSVVUG00000021055	-	80	62.385	Vulpes_vulpes
ENSPREG00000022256	gatc	75	96.396	ENSXCOG00000017087	gatc	81	96.396	Xiphophorus_couchianus
ENSPREG00000022256	gatc	75	96.396	ENSXMAG00000018267	gatc	61	95.614	Xiphophorus_maculatus