EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000022308 (Gene tree)
Gene ID: 103475770
Gene Symbol: srrt
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 8679 bases
Position: chrLG14:9910910-9919588
Accession: 103475770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000032916	ARS2	PF04959.13	1.7e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000033293	-	2918	XM_008427631	ENSPREP00000032916	878 (aa)	XP_008425853	UPI0004A4BA87

Gene Model

Click here to download ENSPREG00000022308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022308	srrt	51	75.817	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSPREG00000022308	srrt	95	89.905	ENSAPOG00000002304	srrt	95	89.192	Acanthochromis_polyacanthus
ENSPREG00000022308	srrt	96	64.983	ENSAMEG00000014506	SRRT	95	64.767	Ailuropoda_melanoleuca
ENSPREG00000022308	srrt	86	90.776	ENSACIG00000015795	srrt	95	79.167	Amphilophus_citrinellus
ENSPREG00000022308	srrt	95	89.762	ENSAOCG00000009693	srrt	95	89.048	Amphiprion_ocellaris
ENSPREG00000022308	srrt	93	56.837	ENSAOCG00000009189	-	94	58.382	Amphiprion_ocellaris
ENSPREG00000022308	srrt	93	56.837	ENSAPEG00000020016	-	94	58.382	Amphiprion_percula
ENSPREG00000022308	srrt	95	89.286	ENSAPEG00000003646	srrt	95	88.571	Amphiprion_percula
ENSPREG00000022308	srrt	95	86.874	ENSATEG00000014425	srrt	95	86.874	Anabas_testudineus
ENSPREG00000022308	srrt	54	65.560	ENSATEG00000003652	-	85	67.672	Anabas_testudineus
ENSPREG00000022308	srrt	95	65.485	ENSACAG00000001014	SRRT	95	66.429	Anolis_carolinensis
ENSPREG00000022308	srrt	51	74.678	ENSANAG00000031718	SRRT	95	64.726	Aotus_nancymaae
ENSPREG00000022308	srrt	93	57.416	ENSACLG00000009423	-	94	57.396	Astatotilapia_calliptera
ENSPREG00000022308	srrt	95	86.651	ENSACLG00000013156	srrt	92	87.366	Astatotilapia_calliptera
ENSPREG00000022308	srrt	96	62.041	ENSBTAG00000001134	SRRT	95	64.046	Bos_taurus
ENSPREG00000022308	srrt	61	45.833	WBGene00017085	E01A2.2	85	42.405	Caenorhabditis_elegans
ENSPREG00000022308	srrt	51	74.464	ENSCJAG00000014917	SRRT	95	64.726	Callithrix_jacchus
ENSPREG00000022308	srrt	96	63.468	ENSCAFG00000023538	SRRT	95	64.162	Canis_familiaris
ENSPREG00000022308	srrt	98	63.110	ENSCAFG00020013358	SRRT	99	61.910	Canis_lupus_dingo
ENSPREG00000022308	srrt	88	74.569	ENSCHIG00000010495	SRRT	95	64.311	Capra_hircus
ENSPREG00000022308	srrt	96	62.269	ENSTSYG00000036426	SRRT	99	63.244	Carlito_syrichta
ENSPREG00000022308	srrt	51	75.658	ENSCAPG00000013586	SRRT	99	65.376	Cavia_aperea
ENSPREG00000022308	srrt	96	64.079	ENSCPOG00000001739	SRRT	95	64.576	Cavia_porcellus
ENSPREG00000022308	srrt	51	74.678	ENSCCAG00000015877	SRRT	95	64.726	Cebus_capucinus
ENSPREG00000022308	srrt	51	74.730	ENSCATG00000036306	SRRT	97	63.982	Cercocebus_atys
ENSPREG00000022308	srrt	96	63.731	ENSCLAG00000007568	SRRT	89	70.940	Chinchilla_lanigera
ENSPREG00000022308	srrt	51	74.678	ENSCSAG00000017996	SRRT	95	64.692	Chlorocebus_sabaeus
ENSPREG00000022308	srrt	51	74.074	ENSCHOG00000007815	SRRT	62	73.529	Choloepus_hoffmanni
ENSPREG00000022308	srrt	73	67.925	ENSCPBG00000011553	SRRT	84	63.345	Chrysemys_picta_bellii
ENSPREG00000022308	srrt	100	41.858	ENSCING00000003506	-	86	42.931	Ciona_intestinalis
ENSPREG00000022308	srrt	100	42.395	ENSCSAVG00000008394	-	81	56.160	Ciona_savignyi
ENSPREG00000022308	srrt	51	74.946	ENSCANG00000034556	SRRT	95	64.802	Colobus_angolensis_palliatus
ENSPREG00000022308	srrt	96	64.855	ENSCGRG00001001594	Srrt	95	64.774	Cricetulus_griseus_chok1gshd
ENSPREG00000022308	srrt	96	60.438	ENSCGRG00000007292	Srrt	99	65.794	Cricetulus_griseus_crigri
ENSPREG00000022308	srrt	74	65.171	ENSCSEG00000005233	-	78	65.795	Cynoglossus_semilaevis
ENSPREG00000022308	srrt	98	75.977	ENSCSEG00000017878	srrt	95	77.150	Cynoglossus_semilaevis
ENSPREG00000022308	srrt	95	92.133	ENSCVAG00000019848	srrt	95	92.133	Cyprinodon_variegatus
ENSPREG00000022308	srrt	90	54.883	ENSCVAG00000017344	-	94	56.489	Cyprinodon_variegatus
ENSPREG00000022308	srrt	96	77.140	ENSDARG00000017762	srrt	95	77.438	Danio_rerio
ENSPREG00000022308	srrt	51	74.678	ENSDNOG00000003851	SRRT	95	64.610	Dasypus_novemcinctus
ENSPREG00000022308	srrt	96	64.774	ENSDORG00000005584	Srrt	99	65.789	Dipodomys_ordii
ENSPREG00000022308	srrt	100	46.918	FBgn0033062	Ars2	81	52.766	Drosophila_melanogaster
ENSPREG00000022308	srrt	74	71.941	ENSETEG00000016175	SRRT	71	72.078	Echinops_telfairi
ENSPREG00000022308	srrt	60	62.690	ENSEBUG00000008517	-	76	62.690	Eptatretus_burgeri
ENSPREG00000022308	srrt	96	64.706	ENSEASG00005016956	SRRT	95	64.624	Equus_asinus_asinus
ENSPREG00000022308	srrt	96	64.706	ENSECAG00000012292	SRRT	95	64.624	Equus_caballus
ENSPREG00000022308	srrt	81	77.083	ENSEEUG00000009117	SRRT	81	77.174	Erinaceus_europaeus
ENSPREG00000022308	srrt	93	58.886	ENSELUG00000021216	-	94	58.685	Esox_lucius
ENSPREG00000022308	srrt	96	74.023	ENSELUG00000006651	srrt	95	74.023	Esox_lucius
ENSPREG00000022308	srrt	96	63.552	ENSFCAG00000006855	SRRT	95	64.896	Felis_catus
ENSPREG00000022308	srrt	51	71.965	ENSFDAG00000021347	SRRT	95	63.679	Fukomys_damarensis
ENSPREG00000022308	srrt	53	57.971	ENSFHEG00000004105	-	93	57.962	Fundulus_heteroclitus
ENSPREG00000022308	srrt	76	96.032	ENSFHEG00000002756	srrt	90	96.032	Fundulus_heteroclitus
ENSPREG00000022308	srrt	96	74.526	ENSGMOG00000018619	srrt	93	73.398	Gadus_morhua
ENSPREG00000022308	srrt	65	67.043	ENSGMOG00000018694	-	78	66.817	Gadus_morhua
ENSPREG00000022308	srrt	52	64.130	ENSGAFG00000020383	-	94	55.609	Gambusia_affinis
ENSPREG00000022308	srrt	100	97.608	ENSGAFG00000005423	srrt	100	97.608	Gambusia_affinis
ENSPREG00000022308	srrt	93	55.728	ENSGACG00000001100	-	94	55.608	Gasterosteus_aculeatus
ENSPREG00000022308	srrt	96	84.588	ENSGACG00000020387	srrt	95	84.179	Gasterosteus_aculeatus
ENSPREG00000022308	srrt	51	74.946	ENSGGOG00000001508	SRRT	96	64.918	Gorilla_gorilla
ENSPREG00000022308	srrt	95	86.770	ENSHBUG00000002942	srrt	92	87.485	Haplochromis_burtoni
ENSPREG00000022308	srrt	96	63.668	ENSHGLG00000008344	Srrt	89	70.726	Heterocephalus_glaber_female
ENSPREG00000022308	srrt	96	64.037	ENSHGLG00100018857	Srrt	89	71.490	Heterocephalus_glaber_male
ENSPREG00000022308	srrt	98	81.607	ENSHCOG00000005403	srrt	95	81.026	Hippocampus_comes
ENSPREG00000022308	srrt	93	54.945	ENSHCOG00000008904	-	94	56.024	Hippocampus_comes
ENSPREG00000022308	srrt	93	74.186	ENSIPUG00000021150	srrt	95	73.944	Ictalurus_punctatus
ENSPREG00000022308	srrt	96	62.716	ENSSTOG00000013776	SRRT	95	64.720	Ictidomys_tridecemlineatus
ENSPREG00000022308	srrt	96	64.836	ENSJJAG00000010446	Srrt	89	71.922	Jaculus_jaculus
ENSPREG00000022308	srrt	54	64.358	ENSKMAG00000008468	-	94	56.992	Kryptolebias_marmoratus
ENSPREG00000022308	srrt	95	86.240	ENSKMAG00000013599	srrt	95	86.358	Kryptolebias_marmoratus
ENSPREG00000022308	srrt	98	81.178	ENSLBEG00000016308	srrt	95	79.763	Labrus_bergylta
ENSPREG00000022308	srrt	95	55.516	ENSLACG00000001089	SRRT	95	56.792	Latimeria_chalumnae
ENSPREG00000022308	srrt	91	61.911	ENSLOCG00000013658	srrt	100	62.576	Lepisosteus_oculatus
ENSPREG00000022308	srrt	51	74.893	ENSLAFG00000007725	SRRT	95	64.808	Loxodonta_africana
ENSPREG00000022308	srrt	51	74.946	ENSMFAG00000033745	SRRT	99	63.982	Macaca_fascicularis
ENSPREG00000022308	srrt	96	63.001	ENSMMUG00000021255	SRRT	95	64.692	Macaca_mulatta
ENSPREG00000022308	srrt	51	74.678	ENSMNEG00000041864	SRRT	97	63.982	Macaca_nemestrina
ENSPREG00000022308	srrt	51	74.946	ENSMLEG00000029479	SRRT	98	63.982	Mandrillus_leucophaeus
ENSPREG00000022308	srrt	95	87.470	ENSMAMG00000014311	srrt	95	86.874	Mastacembelus_armatus
ENSPREG00000022308	srrt	93	57.594	ENSMAMG00000010681	-	94	59.408	Mastacembelus_armatus
ENSPREG00000022308	srrt	93	57.536	ENSMZEG00005028002	-	94	57.515	Maylandia_zebra
ENSPREG00000022308	srrt	95	86.770	ENSMZEG00005016135	srrt	92	87.485	Maylandia_zebra
ENSPREG00000022308	srrt	51	74.249	ENSMAUG00000011386	Srrt	99	65.242	Mesocricetus_auratus
ENSPREG00000022308	srrt	51	74.678	ENSMICG00000009471	SRRT	97	63.261	Microcebus_murinus
ENSPREG00000022308	srrt	51	74.678	ENSMOCG00000001971	Srrt	95	65.046	Microtus_ochrogaster
ENSPREG00000022308	srrt	95	81.071	ENSMMOG00000016399	srrt	95	80.071	Mola_mola
ENSPREG00000022308	srrt	83	56.836	ENSMMOG00000011137	-	99	51.971	Mola_mola
ENSPREG00000022308	srrt	51	71.308	ENSMODG00000004862	SRRT	89	71.519	Monodelphis_domestica
ENSPREG00000022308	srrt	90	80.400	ENSMALG00000018604	srrt	99	78.375	Monopterus_albus
ENSPREG00000022308	srrt	54	53.040	ENSMALG00000005567	-	84	55.066	Monopterus_albus
ENSPREG00000022308	srrt	96	65.497	MGP_CAROLIEiJ_G0027870	Srrt	99	72.119	Mus_caroli
ENSPREG00000022308	srrt	96	65.497	ENSMUSG00000037364	Srrt	99	72.119	Mus_musculus
ENSPREG00000022308	srrt	96	65.805	MGP_PahariEiJ_G0024456	Srrt	99	72.119	Mus_pahari
ENSPREG00000022308	srrt	96	65.497	MGP_SPRETEiJ_G0028875	Srrt	99	72.119	Mus_spretus
ENSPREG00000022308	srrt	96	64.129	ENSMPUG00000015839	SRRT	95	64.393	Mustela_putorius_furo
ENSPREG00000022308	srrt	51	74.464	ENSMLUG00000009975	SRRT	95	64.624	Myotis_lucifugus
ENSPREG00000022308	srrt	96	65.041	ENSNGAG00000023715	Srrt	100	63.540	Nannospalax_galili
ENSPREG00000022308	srrt	98	85.366	ENSNBRG00000019100	srrt	95	85.680	Neolamprologus_brichardi
ENSPREG00000022308	srrt	51	64.835	ENSNLEG00000011987	SRRT	99	57.888	Nomascus_leucogenys
ENSPREG00000022308	srrt	96	54.292	ENSMEUG00000011941	SRRT	94	54.286	Notamacropus_eugenii
ENSPREG00000022308	srrt	61	73.485	ENSOPRG00000002502	-	67	75.000	Ochotona_princeps
ENSPREG00000022308	srrt	51	75.877	ENSODEG00000016856	SRRT	99	65.849	Octodon_degus
ENSPREG00000022308	srrt	93	57.601	ENSONIG00000016080	-	94	57.864	Oreochromis_niloticus
ENSPREG00000022308	srrt	95	85.238	ENSONIG00000004242	srrt	95	82.831	Oreochromis_niloticus
ENSPREG00000022308	srrt	98	84.983	ENSORLG00000008120	srrt	95	84.487	Oryzias_latipes
ENSPREG00000022308	srrt	98	84.750	ENSORLG00020003058	srrt	95	84.248	Oryzias_latipes_hni
ENSPREG00000022308	srrt	98	84.633	ENSORLG00015008062	srrt	95	84.129	Oryzias_latipes_hsok
ENSPREG00000022308	srrt	93	59.466	ENSOMEG00000006963	-	94	59.064	Oryzias_melastigma
ENSPREG00000022308	srrt	98	85.681	ENSOMEG00000003155	srrt	95	85.203	Oryzias_melastigma
ENSPREG00000022308	srrt	51	74.678	ENSOGAG00000017242	SRRT	95	64.808	Otolemur_garnettii
ENSPREG00000022308	srrt	51	74.514	ENSOARG00000015645	SRRT	95	64.269	Ovis_aries
ENSPREG00000022308	srrt	51	74.946	ENSPPAG00000041090	SRRT	97	63.018	Pan_paniscus
ENSPREG00000022308	srrt	96	63.542	ENSPPRG00000009557	SRRT	95	64.890	Panthera_pardus
ENSPREG00000022308	srrt	96	63.668	ENSPTIG00000014355	SRRT	95	65.012	Panthera_tigris_altaica
ENSPREG00000022308	srrt	51	74.946	ENSPTRG00000019511	SRRT	99	62.383	Pan_troglodytes
ENSPREG00000022308	srrt	51	73.207	ENSPANG00000020763	SRRT	96	63.982	Papio_anubis
ENSPREG00000022308	srrt	94	70.828	ENSPKIG00000022212	-	95	71.243	Paramormyrops_kingsleyae
ENSPREG00000022308	srrt	98	73.439	ENSPKIG00000005434	srrt	95	73.450	Paramormyrops_kingsleyae
ENSPREG00000022308	srrt	51	75.991	ENSPSIG00000016311	SRRT	95	65.182	Pelodiscus_sinensis
ENSPREG00000022308	srrt	98	75.402	ENSPMGG00000002841	srrt	95	76.387	Periophthalmus_magnuspinnatus
ENSPREG00000022308	srrt	51	75.877	ENSPEMG00000010834	Srrt	99	65.660	Peromyscus_maniculatus_bairdii
ENSPREG00000022308	srrt	96	54.378	ENSPMAG00000009614	-	55	63.080	Petromyzon_marinus
ENSPREG00000022308	srrt	96	64.046	ENSPCIG00000000816	SRRT	95	64.302	Phascolarctos_cinereus
ENSPREG00000022308	srrt	93	52.530	ENSPFOG00000016554	-	94	55.967	Poecilia_formosa
ENSPREG00000022308	srrt	100	98.975	ENSPFOG00000005704	srrt	100	98.975	Poecilia_formosa
ENSPREG00000022308	srrt	52	64.935	ENSPLAG00000004526	-	94	55.875	Poecilia_latipinna
ENSPREG00000022308	srrt	100	96.956	ENSPLAG00000021992	srrt	100	96.956	Poecilia_latipinna
ENSPREG00000022308	srrt	88	51.777	ENSPMEG00000001520	-	94	55.092	Poecilia_mexicana
ENSPREG00000022308	srrt	100	98.519	ENSPMEG00000001182	srrt	100	98.519	Poecilia_mexicana
ENSPREG00000022308	srrt	51	57.451	ENSPPYG00000017432	SRRT	95	55.439	Pongo_abelii
ENSPREG00000022308	srrt	51	72.785	ENSPCAG00000001621	SRRT	95	63.048	Procavia_capensis
ENSPREG00000022308	srrt	51	74.946	ENSPCOG00000025751	SRRT	95	63.963	Propithecus_coquereli
ENSPREG00000022308	srrt	68	66.524	ENSPVAG00000000834	SRRT	100	56.479	Pteropus_vampyrus
ENSPREG00000022308	srrt	95	86.651	ENSPNYG00000018710	srrt	95	87.366	Pundamilia_nyererei
ENSPREG00000022308	srrt	96	59.212	ENSPNAG00000010629	srrt	94	61.485	Pygocentrus_nattereri
ENSPREG00000022308	srrt	51	64.924	ENSRNOG00000048277	AABR07035787.1	92	64.924	Rattus_norvegicus
ENSPREG00000022308	srrt	51	74.678	ENSRBIG00000035718	SRRT	97	63.982	Rhinopithecus_bieti
ENSPREG00000022308	srrt	51	74.678	ENSRROG00000030622	SRRT	98	63.982	Rhinopithecus_roxellana
ENSPREG00000022308	srrt	51	74.946	ENSSBOG00000033570	SRRT	96	64.836	Saimiri_boliviensis_boliviensis
ENSPREG00000022308	srrt	72	60.863	ENSSHAG00000007349	-	99	61.315	Sarcophilus_harrisii
ENSPREG00000022308	srrt	94	75.505	ENSSFOG00015017293	srrt	95	76.588	Scleropages_formosus
ENSPREG00000022308	srrt	51	65.443	ENSSMAG00000018195	-	94	55.833	Scophthalmus_maximus
ENSPREG00000022308	srrt	95	87.947	ENSSMAG00000015342	srrt	95	87.828	Scophthalmus_maximus
ENSPREG00000022308	srrt	95	90.215	ENSSDUG00000012049	srrt	95	86.277	Seriola_dumerili
ENSPREG00000022308	srrt	52	56.688	ENSSDUG00000002051	-	93	57.511	Seriola_dumerili
ENSPREG00000022308	srrt	83	91.912	ENSSLDG00000017477	srrt	87	91.912	Seriola_lalandi_dorsalis
ENSPREG00000022308	srrt	86	56.996	ENSSPAG00000018943	-	93	58.785	Stegastes_partitus
ENSPREG00000022308	srrt	95	88.731	ENSSPAG00000005665	srrt	94	88.019	Stegastes_partitus
ENSPREG00000022308	srrt	98	81.871	ENSTRUG00000016075	srrt	95	81.657	Takifugu_rubripes
ENSPREG00000022308	srrt	89	54.534	ENSTRUG00000000023	-	93	54.054	Takifugu_rubripes
ENSPREG00000022308	srrt	74	76.048	ENSTNIG00000011779	srrt	100	75.749	Tetraodon_nigroviridis
ENSPREG00000022308	srrt	93	54.424	ENSTNIG00000003111	-	94	54.946	Tetraodon_nigroviridis
ENSPREG00000022308	srrt	59	77.401	ENSTBEG00000005212	SRRT	57	77.401	Tupaia_belangeri
ENSPREG00000022308	srrt	51	74.464	ENSTTRG00000011104	SRRT	95	64.509	Tursiops_truncatus
ENSPREG00000022308	srrt	96	63.426	ENSUAMG00000027997	SRRT	98	64.509	Ursus_americanus
ENSPREG00000022308	srrt	96	63.552	ENSUMAG00000011295	SRRT	95	64.509	Ursus_maritimus
ENSPREG00000022308	srrt	96	63.468	ENSVVUG00000023572	SRRT	95	64.162	Vulpes_vulpes
ENSPREG00000022308	srrt	72	76.404	ENSXETG00000025124	srrt	95	54.027	Xenopus_tropicalis
ENSPREG00000022308	srrt	54	52.521	ENSXCOG00000013105	-	91	54.095	Xiphophorus_couchianus
ENSPREG00000022308	srrt	100	97.836	ENSXMAG00000007627	srrt	100	97.836	Xiphophorus_maculatus
ENSPREG00000022308	srrt	93	52.433	ENSXMAG00000002090	-	94	56.750	Xiphophorus_maculatus