EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000022403 (Gene tree)
Gene ID: 103462323
Gene Symbol: pop4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 5168 bases
Position: chrLG3:14938775-14943942
Accession: 103462323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000033061	UPF0086	PF01868.16	5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000033438	-	696	XM_008405013	ENSPREP00000033061	231 (aa)	XP_008403235	-

Gene Model

Click here to download ENSPREG00000022403's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03008	Ribosome biogenesis in eukaryotes	KEGG
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022403	pop4	86	59.296	ENSG00000105171	POP4	99	73.684	Homo_sapiens
ENSPREG00000022403	pop4	86	58.291	ENSAMEG00000018329	-	90	58.291	Ailuropoda_melanoleuca
ENSPREG00000022403	pop4	86	52.736	ENSAMEG00000003172	-	90	52.736	Ailuropoda_melanoleuca
ENSPREG00000022403	pop4	94	69.683	ENSACIG00000008358	pop4	100	69.683	Amphilophus_citrinellus
ENSPREG00000022403	pop4	84	76.531	ENSAOCG00000010116	pop4	95	76.531	Amphiprion_ocellaris
ENSPREG00000022403	pop4	94	70.982	ENSAPEG00000002829	pop4	94	70.982	Amphiprion_percula
ENSPREG00000022403	pop4	93	71.946	ENSATEG00000013028	pop4	99	71.946	Anabas_testudineus
ENSPREG00000022403	pop4	85	56.853	ENSAPLG00000014051	POP4	95	57.360	Anas_platyrhynchos
ENSPREG00000022403	pop4	88	58.621	ENSANAG00000020295	POP4	99	56.818	Aotus_nancymaae
ENSPREG00000022403	pop4	96	69.163	ENSACLG00000000526	pop4	99	69.545	Astatotilapia_calliptera
ENSPREG00000022403	pop4	92	63.303	ENSAMXG00000002899	pop4	98	63.303	Astyanax_mexicanus
ENSPREG00000022403	pop4	88	58.621	ENSBTAG00000002223	POP4	92	58.621	Bos_taurus
ENSPREG00000022403	pop4	88	58.621	ENSCJAG00000046750	POP4	95	65.497	Callithrix_jacchus
ENSPREG00000022403	pop4	63	68.493	ENSCAFG00000007630	POP4	93	64.327	Canis_familiaris
ENSPREG00000022403	pop4	88	59.113	ENSCHIG00000016743	POP4	92	59.113	Capra_hircus
ENSPREG00000022403	pop4	88	58.128	ENSTSYG00000003488	POP4	92	58.128	Carlito_syrichta
ENSPREG00000022403	pop4	88	39.901	ENSCAPG00000011105	POP4	91	41.176	Cavia_aperea
ENSPREG00000022403	pop4	88	56.650	ENSCPOG00000002992	POP4	92	57.843	Cavia_porcellus
ENSPREG00000022403	pop4	61	61.702	ENSCCAG00000034244	-	91	52.709	Cebus_capucinus
ENSPREG00000022403	pop4	88	58.621	ENSCCAG00000020285	-	92	58.621	Cebus_capucinus
ENSPREG00000022403	pop4	86	60.500	ENSCATG00000036022	POP4	99	73.684	Cercocebus_atys
ENSPREG00000022403	pop4	88	58.128	ENSCLAG00000013162	POP4	92	59.314	Chinchilla_lanigera
ENSPREG00000022403	pop4	86	59.296	ENSCSAG00000004868	POP4	91	60.500	Chlorocebus_sabaeus
ENSPREG00000022403	pop4	88	41.379	ENSCHOG00000002071	POP4	93	41.379	Choloepus_hoffmanni
ENSPREG00000022403	pop4	93	55.455	ENSCPBG00000016132	POP4	99	55.455	Chrysemys_picta_bellii
ENSPREG00000022403	pop4	53	37.398	ENSCING00000023871	-	62	37.398	Ciona_intestinalis
ENSPREG00000022403	pop4	86	59.296	ENSCANG00000005924	POP4	98	60.500	Colobus_angolensis_palliatus
ENSPREG00000022403	pop4	88	60.099	ENSCGRG00001017185	Pop4	92	60.099	Cricetulus_griseus_chok1gshd
ENSPREG00000022403	pop4	88	60.099	ENSCGRG00000008155	Pop4	92	60.099	Cricetulus_griseus_crigri
ENSPREG00000022403	pop4	94	63.348	ENSCSEG00000002946	pop4	100	63.348	Cynoglossus_semilaevis
ENSPREG00000022403	pop4	96	59.211	ENSCVAG00000018602	POP4	99	59.211	Cyprinodon_variegatus
ENSPREG00000022403	pop4	91	60.465	ENSDARG00000101472	pop4	97	60.465	Danio_rerio
ENSPREG00000022403	pop4	88	58.621	ENSDNOG00000047663	POP4	81	58.621	Dasypus_novemcinctus
ENSPREG00000022403	pop4	68	53.797	ENSDORG00000008577	Pop4	91	53.797	Dipodomys_ordii
ENSPREG00000022403	pop4	74	30.556	FBgn0035831	CG8038	87	30.556	Drosophila_melanogaster
ENSPREG00000022403	pop4	92	47.005	ENSETEG00000003607	POP4	99	47.706	Echinops_telfairi
ENSPREG00000022403	pop4	65	46.309	ENSEBUG00000004305	pop4	68	44.375	Eptatretus_burgeri
ENSPREG00000022403	pop4	93	37.727	ENSEBUG00000008575	pop4	99	37.727	Eptatretus_burgeri
ENSPREG00000022403	pop4	65	52.349	ENSEBUG00000010447	pop4	63	49.383	Eptatretus_burgeri
ENSPREG00000022403	pop4	88	67.308	ENSECAG00000020206	POP4	82	67.308	Equus_caballus
ENSPREG00000022403	pop4	83	42.188	ENSEEUG00000013109	POP4	96	42.188	Erinaceus_europaeus
ENSPREG00000022403	pop4	93	59.545	ENSELUG00000019812	pop4	99	60.455	Esox_lucius
ENSPREG00000022403	pop4	86	58.794	ENSFCAG00000001619	POP4	90	58.794	Felis_catus
ENSPREG00000022403	pop4	95	55.111	ENSFALG00000000206	POP4	99	55.111	Ficedula_albicollis
ENSPREG00000022403	pop4	88	59.113	ENSFDAG00000017859	POP4	92	59.113	Fukomys_damarensis
ENSPREG00000022403	pop4	84	74.242	ENSFHEG00000012745	pop4	89	74.242	Fundulus_heteroclitus
ENSPREG00000022403	pop4	79	66.667	ENSGMOG00000000335	pop4	87	66.667	Gadus_morhua
ENSPREG00000022403	pop4	94	54.955	ENSGALG00000041972	POP4	93	54.955	Gallus_gallus
ENSPREG00000022403	pop4	74	89.266	ENSGAFG00000003571	pop4	98	89.266	Gambusia_affinis
ENSPREG00000022403	pop4	90	69.626	ENSGACG00000014510	pop4	99	75.956	Gasterosteus_aculeatus
ENSPREG00000022403	pop4	96	56.195	ENSGAGG00000024544	POP4	81	56.195	Gopherus_agassizii
ENSPREG00000022403	pop4	88	58.621	ENSGGOG00000038346	POP4	92	59.804	Gorilla_gorilla
ENSPREG00000022403	pop4	93	69.545	ENSHBUG00000021821	pop4	99	69.545	Haplochromis_burtoni
ENSPREG00000022403	pop4	88	58.128	ENSHGLG00000015798	POP4	92	58.128	Heterocephalus_glaber_female
ENSPREG00000022403	pop4	88	58.128	ENSHGLG00100009737	POP4	92	58.128	Heterocephalus_glaber_male
ENSPREG00000022403	pop4	93	67.273	ENSHCOG00000020937	pop4	99	67.273	Hippocampus_comes
ENSPREG00000022403	pop4	93	60.455	ENSIPUG00000013652	pop4	99	60.455	Ictalurus_punctatus
ENSPREG00000022403	pop4	88	58.621	ENSSTOG00000011016	POP4	92	58.621	Ictidomys_tridecemlineatus
ENSPREG00000022403	pop4	88	59.606	ENSJJAG00000013376	Pop4	92	59.606	Jaculus_jaculus
ENSPREG00000022403	pop4	93	72.851	ENSKMAG00000012250	pop4	99	72.851	Kryptolebias_marmoratus
ENSPREG00000022403	pop4	93	65.611	ENSLBEG00000014139	pop4	99	67.873	Labrus_bergylta
ENSPREG00000022403	pop4	93	65.611	ENSLBEG00000018846	-	99	67.873	Labrus_bergylta
ENSPREG00000022403	pop4	92	52.995	ENSLACG00000008581	POP4	97	52.995	Latimeria_chalumnae
ENSPREG00000022403	pop4	93	60.000	ENSLOCG00000005597	pop4	99	60.000	Lepisosteus_oculatus
ENSPREG00000022403	pop4	88	58.128	ENSLAFG00000000084	POP4	92	59.314	Loxodonta_africana
ENSPREG00000022403	pop4	86	59.296	ENSMFAG00000029606	POP4	90	60.500	Macaca_fascicularis
ENSPREG00000022403	pop4	86	59.296	ENSMMUG00000017424	POP4	90	59.296	Macaca_mulatta
ENSPREG00000022403	pop4	86	59.296	ENSMNEG00000031374	POP4	90	59.296	Macaca_nemestrina
ENSPREG00000022403	pop4	86	59.799	ENSMLEG00000043454	POP4	90	61.500	Mandrillus_leucophaeus
ENSPREG00000022403	pop4	94	71.749	ENSMAMG00000011716	pop4	100	73.094	Mastacembelus_armatus
ENSPREG00000022403	pop4	93	69.545	ENSMZEG00005002360	pop4	99	69.545	Maylandia_zebra
ENSPREG00000022403	pop4	92	55.760	ENSMGAG00000005337	POP4	96	56.221	Meleagris_gallopavo
ENSPREG00000022403	pop4	88	58.128	ENSMAUG00000020110	Pop4	92	58.252	Mesocricetus_auratus
ENSPREG00000022403	pop4	88	61.084	ENSMICG00000035730	POP4	91	62.745	Microcebus_murinus
ENSPREG00000022403	pop4	94	68.018	ENSMMOG00000015321	pop4	100	68.468	Mola_mola
ENSPREG00000022403	pop4	94	53.153	ENSMODG00000029406	POP4	96	54.054	Monodelphis_domestica
ENSPREG00000022403	pop4	93	72.273	ENSMALG00000012571	pop4	99	72.273	Monopterus_albus
ENSPREG00000022403	pop4	88	60.099	MGP_CAROLIEiJ_G0029600	Pop4	92	60.099	Mus_caroli
ENSPREG00000022403	pop4	88	59.606	ENSMUSG00000030423	Pop4	92	59.606	Mus_musculus
ENSPREG00000022403	pop4	88	59.606	MGP_SPRETEiJ_G0030699	Pop4	92	60.784	Mus_spretus
ENSPREG00000022403	pop4	88	58.621	ENSMPUG00000008041	-	92	58.621	Mustela_putorius_furo
ENSPREG00000022403	pop4	88	51.961	ENSMPUG00000008063	-	92	51.961	Mustela_putorius_furo
ENSPREG00000022403	pop4	88	46.078	ENSMLUG00000010774	POP4	92	46.078	Myotis_lucifugus
ENSPREG00000022403	pop4	54	67.200	ENSMEUG00000003636	-	100	67.200	Notamacropus_eugenii
ENSPREG00000022403	pop4	87	59.701	ENSOPRG00000004736	POP4	100	60.591	Ochotona_princeps
ENSPREG00000022403	pop4	88	57.635	ENSODEG00000013025	POP4	95	58.824	Octodon_degus
ENSPREG00000022403	pop4	96	68.722	ENSONIG00000003458	pop4	100	68.722	Oreochromis_niloticus
ENSPREG00000022403	pop4	88	60.099	ENSOCUG00000015974	POP4	92	60.099	Oryctolagus_cuniculus
ENSPREG00000022403	pop4	94	70.136	ENSORLG00000020317	pop4	100	70.136	Oryzias_latipes
ENSPREG00000022403	pop4	93	69.231	ENSORLG00015011624	pop4	99	69.231	Oryzias_latipes_hsok
ENSPREG00000022403	pop4	93	69.683	ENSOMEG00000002538	pop4	99	69.683	Oryzias_melastigma
ENSPREG00000022403	pop4	90	59.048	ENSOGAG00000011168	POP4	95	60.664	Otolemur_garnettii
ENSPREG00000022403	pop4	89	58.537	ENSOARG00000004041	POP4	92	58.537	Ovis_aries
ENSPREG00000022403	pop4	86	59.296	ENSPPAG00000040372	POP4	90	60.500	Pan_paniscus
ENSPREG00000022403	pop4	86	58.794	ENSPPRG00000010502	POP4	90	58.794	Panthera_pardus
ENSPREG00000022403	pop4	86	58.794	ENSPTIG00000016598	POP4	90	58.794	Panthera_tigris_altaica
ENSPREG00000022403	pop4	86	59.296	ENSPTRG00000010779	POP4	90	60.500	Pan_troglodytes
ENSPREG00000022403	pop4	86	59.296	ENSPANG00000008546	POP4	90	60.500	Papio_anubis
ENSPREG00000022403	pop4	83	64.249	ENSPKIG00000004468	pop4	85	64.249	Paramormyrops_kingsleyae
ENSPREG00000022403	pop4	92	57.143	ENSPSIG00000015690	POP4	98	59.799	Pelodiscus_sinensis
ENSPREG00000022403	pop4	83	62.755	ENSPMGG00000008608	pop4	94	64.286	Periophthalmus_magnuspinnatus
ENSPREG00000022403	pop4	88	59.606	ENSPEMG00000014034	-	88	61.538	Peromyscus_maniculatus_bairdii
ENSPREG00000022403	pop4	88	51.232	ENSPEMG00000019982	-	92	51.456	Peromyscus_maniculatus_bairdii
ENSPREG00000022403	pop4	63	62.759	ENSPMAG00000006265	pop4	73	62.759	Petromyzon_marinus
ENSPREG00000022403	pop4	88	56.650	ENSPCIG00000024738	POP4	87	56.650	Phascolarctos_cinereus
ENSPREG00000022403	pop4	93	94.091	ENSPFOG00000000925	pop4	99	94.091	Poecilia_formosa
ENSPREG00000022403	pop4	93	93.636	ENSPLAG00000003161	pop4	99	93.636	Poecilia_latipinna
ENSPREG00000022403	pop4	93	94.091	ENSPMEG00000002475	pop4	99	94.091	Poecilia_mexicana
ENSPREG00000022403	pop4	86	59.296	ENSPPYG00000009805	POP4	90	60.500	Pongo_abelii
ENSPREG00000022403	pop4	87	60.000	ENSPCAG00000007737	POP4	90	60.000	Procavia_capensis
ENSPREG00000022403	pop4	88	59.606	ENSPCOG00000018055	POP4	92	59.606	Propithecus_coquereli
ENSPREG00000022403	pop4	88	59.606	ENSPVAG00000006069	POP4	92	59.606	Pteropus_vampyrus
ENSPREG00000022403	pop4	93	69.091	ENSPNYG00000020038	pop4	99	69.091	Pundamilia_nyererei
ENSPREG00000022403	pop4	93	62.443	ENSPNAG00000005591	pop4	99	62.443	Pygocentrus_nattereri
ENSPREG00000022403	pop4	88	60.591	ENSRNOG00000027646	Pop4	92	60.591	Rattus_norvegicus
ENSPREG00000022403	pop4	68	55.769	ENSRBIG00000044769	POP4	84	62.879	Rhinopithecus_bieti
ENSPREG00000022403	pop4	86	59.296	ENSRROG00000028903	POP4	90	60.500	Rhinopithecus_roxellana
ENSPREG00000022403	pop4	58	30.872	YBR257W	-	52	30.872	Saccharomyces_cerevisiae
ENSPREG00000022403	pop4	88	59.804	ENSSBOG00000032445	POP4	92	59.804	Saimiri_boliviensis_boliviensis
ENSPREG00000022403	pop4	88	56.158	ENSSHAG00000016888	POP4	92	56.158	Sarcophilus_harrisii
ENSPREG00000022403	pop4	94	59.556	ENSSFOG00015014556	pop4	100	59.556	Scleropages_formosus
ENSPREG00000022403	pop4	93	71.493	ENSSMAG00000016611	pop4	99	71.493	Scophthalmus_maximus
ENSPREG00000022403	pop4	94	70.089	ENSSDUG00000019865	pop4	90	70.089	Seriola_dumerili
ENSPREG00000022403	pop4	94	68.750	ENSSLDG00000001763	pop4	100	68.750	Seriola_lalandi_dorsalis
ENSPREG00000022403	pop4	88	60.099	ENSSARG00000004748	POP4	93	60.099	Sorex_araneus
ENSPREG00000022403	pop4	94	72.768	ENSSPAG00000014364	pop4	100	72.768	Stegastes_partitus
ENSPREG00000022403	pop4	88	57.635	ENSSSCG00000002854	POP4	92	57.635	Sus_scrofa
ENSPREG00000022403	pop4	86	58.794	ENSTGUG00000008953	POP4	99	58.794	Taeniopygia_guttata
ENSPREG00000022403	pop4	83	70.157	ENSTNIG00000006401	pop4	94	70.157	Tetraodon_nigroviridis
ENSPREG00000022403	pop4	88	60.099	ENSTBEG00000002194	POP4	92	60.099	Tupaia_belangeri
ENSPREG00000022403	pop4	88	57.143	ENSTTRG00000005882	POP4	92	57.143	Tursiops_truncatus
ENSPREG00000022403	pop4	86	58.794	ENSUAMG00000003049	-	90	58.794	Ursus_americanus
ENSPREG00000022403	pop4	86	58.794	ENSUMAG00000007522	-	90	58.794	Ursus_maritimus
ENSPREG00000022403	pop4	86	58.291	ENSVVUG00000016876	-	69	58.291	Vulpes_vulpes
ENSPREG00000022403	pop4	92	52.995	ENSXETG00000017598	pop4	98	53.456	Xenopus_tropicalis
ENSPREG00000022403	pop4	100	90.987	ENSXCOG00000017695	pop4	100	90.987	Xiphophorus_couchianus
ENSPREG00000022403	pop4	100	90.987	ENSXMAG00000013862	pop4	100	90.987	Xiphophorus_maculatus