EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000022509 (Gene tree)
Gene ID: 103477014
Gene Symbol: rab23
Alias: zgc:110261
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2169 bases
Position: chrLG15:18394385-18396553
Accession: 103477014
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000033208	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000033586	-	615	XM_008429835	ENSPREP00000033208	204 (aa)	XP_008428057	-

Gene Model

Click here to download ENSPREG00000022509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000022509	rab23	84	36.723	ENSPREG00000017567	rab13	88	36.723
ENSPREG00000022509	rab23	77	37.423	ENSPREG00000022241	si:dkey-13a21.4	79	37.423
ENSPREG00000022509	rab23	79	35.583	ENSPREG00000006357	rab11ba	51	36.111
ENSPREG00000022509	rab23	75	37.821	ENSPREG00000005923	rab18a	62	37.821
ENSPREG00000022509	rab23	83	35.057	ENSPREG00000017750	RAB7A	76	34.591
ENSPREG00000022509	rab23	74	34.615	ENSPREG00000006970	rab9b	65	33.099
ENSPREG00000022509	rab23	78	35.000	ENSPREG00000010154	rab4a	66	35.714
ENSPREG00000022509	rab23	83	35.057	ENSPREG00000012148	RAB7A	76	34.591
ENSPREG00000022509	rab23	77	36.250	ENSPREG00000007129	RAB39B	69	36.486
ENSPREG00000022509	rab23	75	33.548	ENSPREG00000000880	rab33ba	61	32.867
ENSPREG00000022509	rab23	94	32.500	ENSPREG00000006119	rab25a	87	30.526
ENSPREG00000022509	rab23	83	34.659	ENSPREG00000020276	RAB29	78	34.161
ENSPREG00000022509	rab23	76	33.129	ENSPREG00000019386	rasl11b	65	30.435
ENSPREG00000022509	rab23	71	35.762	ENSPREG00000001864	-	60	34.532
ENSPREG00000022509	rab23	74	34.641	ENSPREG00000013962	rab42a	65	35.461
ENSPREG00000022509	rab23	79	37.423	ENSPREG00000017337	rab25b	68	37.500
ENSPREG00000022509	rab23	74	33.553	ENSPREG00000010920	rab22a	72	32.857
ENSPREG00000022509	rab23	94	33.505	ENSPREG00000004889	-	87	33.516
ENSPREG00000022509	rab23	74	38.158	ENSPREG00000015480	rab6ba	70	37.857
ENSPREG00000022509	rab23	51	33.019	ENSPREG00000016664	rap2b	84	31.356
ENSPREG00000022509	rab23	95	33.000	ENSPREG00000022167	-	82	31.915
ENSPREG00000022509	rab23	78	33.540	ENSPREG00000019783	RAB15	70	34.247
ENSPREG00000022509	rab23	73	35.065	ENSPREG00000001832	rab9a	70	33.803
ENSPREG00000022509	rab23	80	36.585	ENSPREG00000009605	rab11a	67	37.241
ENSPREG00000022509	rab23	75	35.256	ENSPREG00000017344	-	67	35.417
ENSPREG00000022509	rab23	70	39.456	ENSPREG00000009813	rab34b	54	37.500
ENSPREG00000022509	rab23	98	32.020	ENSPREG00000020321	rab1ab	90	33.333
ENSPREG00000022509	rab23	94	31.884	ENSPREG00000014888	rab2a	91	31.795
ENSPREG00000022509	rab23	78	34.132	ENSPREG00000017487	rab12	77	31.959
ENSPREG00000022509	rab23	75	34.194	ENSPREG00000010284	rab15	66	35.000
ENSPREG00000022509	rab23	98	33.663	ENSPREG00000003616	rab1ba	90	35.165
ENSPREG00000022509	rab23	75	36.129	ENSPREG00000009597	-	67	36.364
ENSPREG00000022509	rab23	79	35.583	ENSPREG00000014269	rab11bb	66	36.111
ENSPREG00000022509	rab23	87	35.393	ENSPREG00000014634	rab30	87	35.393
ENSPREG00000022509	rab23	69	40.136	ENSPREG00000008951	rab34a	54	37.500
ENSPREG00000022509	rab23	71	36.735	ENSPREG00000012803	rhebl1	73	36.029
ENSPREG00000022509	rab23	98	32.057	ENSPREG00000017324	rab11al	88	31.579
ENSPREG00000022509	rab23	90	31.351	ENSPREG00000006363	rras	90	31.351
ENSPREG00000022509	rab23	75	34.756	ENSPREG00000006055	rasl11a	58	33.553
ENSPREG00000022509	rab23	71	35.811	ENSPREG00000007017	zgc:101559	58	35.294
ENSPREG00000022509	rab23	78	33.750	ENSPREG00000005323	si:dkey-16l2.16	67	34.532
ENSPREG00000022509	rab23	74	37.500	ENSPREG00000010146	rab5c	64	36.429
ENSPREG00000022509	rab23	95	32.995	ENSPREG00000021505	rab6a	88	32.447
ENSPREG00000022509	rab23	71	36.054	ENSPREG00000010752	rheb	74	36.029
ENSPREG00000022509	rab23	73	35.065	ENSPREG00000012522	-	71	35.211
ENSPREG00000022509	rab23	78	35.625	ENSPREG00000006336	-	65	36.170
ENSPREG00000022509	rab23	74	38.158	ENSPREG00000009535	RAB41	66	37.857
ENSPREG00000022509	rab23	87	34.270	ENSPREG00000017517	zgc:171927	73	36.076

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022509	rab23	99	72.034	ENSG00000112210	RAB23	99	72.034	Homo_sapiens
ENSPREG00000022509	rab23	100	82.979	ENSAPOG00000008892	rab23	100	82.979	Acanthochromis_polyacanthus
ENSPREG00000022509	rab23	99	71.610	ENSAMEG00000006825	RAB23	99	71.610	Ailuropoda_melanoleuca
ENSPREG00000022509	rab23	100	95.588	ENSACIG00000020496	rab23	100	95.588	Amphilophus_citrinellus
ENSPREG00000022509	rab23	100	96.078	ENSAOCG00000004234	rab23	100	96.078	Amphiprion_ocellaris
ENSPREG00000022509	rab23	100	96.078	ENSAPEG00000019758	rab23	100	96.078	Amphiprion_percula
ENSPREG00000022509	rab23	100	96.569	ENSATEG00000020913	rab23	100	96.569	Anabas_testudineus
ENSPREG00000022509	rab23	78	89.375	ENSAPLG00000003715	RAB23	90	89.375	Anas_platyrhynchos
ENSPREG00000022509	rab23	99	70.042	ENSACAG00000006656	RAB23	99	70.042	Anolis_carolinensis
ENSPREG00000022509	rab23	99	72.458	ENSANAG00000027052	-	99	72.034	Aotus_nancymaae
ENSPREG00000022509	rab23	100	82.128	ENSACLG00000002819	rab23	100	82.128	Astatotilapia_calliptera
ENSPREG00000022509	rab23	100	88.350	ENSAMXG00000014960	rab23	100	88.350	Astyanax_mexicanus
ENSPREG00000022509	rab23	99	70.763	ENSBTAG00000005362	RAB23	99	70.763	Bos_taurus
ENSPREG00000022509	rab23	99	72.458	ENSCJAG00000010247	RAB23	99	72.034	Callithrix_jacchus
ENSPREG00000022509	rab23	99	72.034	ENSCAFG00000002459	RAB23	99	72.034	Canis_familiaris
ENSPREG00000022509	rab23	99	72.034	ENSCAFG00020015900	RAB23	99	72.034	Canis_lupus_dingo
ENSPREG00000022509	rab23	99	70.763	ENSCHIG00000009815	RAB23	99	70.763	Capra_hircus
ENSPREG00000022509	rab23	100	72.152	ENSTSYG00000029126	RAB23	100	72.152	Carlito_syrichta
ENSPREG00000022509	rab23	99	71.064	ENSCPOG00000030218	RAB23	99	71.064	Cavia_porcellus
ENSPREG00000022509	rab23	99	72.034	ENSCCAG00000020364	RAB23	99	71.610	Cebus_capucinus
ENSPREG00000022509	rab23	99	72.458	ENSCATG00000027876	RAB23	99	72.458	Cercocebus_atys
ENSPREG00000022509	rab23	99	71.610	ENSCLAG00000000797	RAB23	99	71.610	Chinchilla_lanigera
ENSPREG00000022509	rab23	99	72.881	ENSCSAG00000013438	RAB23	99	72.881	Chlorocebus_sabaeus
ENSPREG00000022509	rab23	99	71.186	ENSCPBG00000022640	RAB23	99	70.763	Chrysemys_picta_bellii
ENSPREG00000022509	rab23	100	60.905	ENSCING00000001155	-	100	61.728	Ciona_intestinalis
ENSPREG00000022509	rab23	100	58.921	ENSCSAVG00000001356	-	100	59.091	Ciona_savignyi
ENSPREG00000022509	rab23	99	72.034	ENSCANG00000031065	RAB23	99	72.034	Colobus_angolensis_palliatus
ENSPREG00000022509	rab23	99	72.881	ENSCGRG00001008994	Rab23	99	72.881	Cricetulus_griseus_chok1gshd
ENSPREG00000022509	rab23	99	71.915	ENSCGRG00000013630	Rab23	99	71.915	Cricetulus_griseus_crigri
ENSPREG00000022509	rab23	100	95.098	ENSCSEG00000010565	rab23	100	95.098	Cynoglossus_semilaevis
ENSPREG00000022509	rab23	100	95.588	ENSCVAG00000020501	rab23	100	95.588	Cyprinodon_variegatus
ENSPREG00000022509	rab23	100	75.527	ENSDARG00000004151	rab23	100	75.527	Danio_rerio
ENSPREG00000022509	rab23	99	71.610	ENSDNOG00000015501	RAB23	99	71.610	Dasypus_novemcinctus
ENSPREG00000022509	rab23	100	71.186	ENSDORG00000028344	Rab23	100	71.186	Dipodomys_ordii
ENSPREG00000022509	rab23	77	73.418	FBgn0037364	Rab23	59	73.418	Drosophila_melanogaster
ENSPREG00000022509	rab23	96	57.456	ENSEBUG00000010861	-	91	57.456	Eptatretus_burgeri
ENSPREG00000022509	rab23	99	72.034	ENSEASG00005003529	RAB23	99	72.034	Equus_asinus_asinus
ENSPREG00000022509	rab23	99	72.034	ENSECAG00000013427	RAB23	99	72.034	Equus_caballus
ENSPREG00000022509	rab23	100	72.152	ENSEEUG00000015045	RAB23	100	72.152	Erinaceus_europaeus
ENSPREG00000022509	rab23	100	77.021	ENSELUG00000020788	rab23	100	77.021	Esox_lucius
ENSPREG00000022509	rab23	99	72.034	ENSFCAG00000044358	RAB23	99	72.034	Felis_catus
ENSPREG00000022509	rab23	99	70.763	ENSFALG00000001708	RAB23	99	70.763	Ficedula_albicollis
ENSPREG00000022509	rab23	99	71.610	ENSFDAG00000014834	RAB23	99	71.610	Fukomys_damarensis
ENSPREG00000022509	rab23	100	84.681	ENSFHEG00000023069	rab23	100	84.681	Fundulus_heteroclitus
ENSPREG00000022509	rab23	100	79.574	ENSGMOG00000005102	rab23	100	79.574	Gadus_morhua
ENSPREG00000022509	rab23	99	71.610	ENSGALG00000016279	RAB23	99	71.610	Gallus_gallus
ENSPREG00000022509	rab23	100	98.529	ENSGAFG00000007684	rab23	100	98.529	Gambusia_affinis
ENSPREG00000022509	rab23	100	82.128	ENSGACG00000006151	rab23	100	82.128	Gasterosteus_aculeatus
ENSPREG00000022509	rab23	99	70.763	ENSGAGG00000012709	RAB23	99	70.339	Gopherus_agassizii
ENSPREG00000022509	rab23	100	94.608	ENSHBUG00000007966	rab23	100	94.608	Haplochromis_burtoni
ENSPREG00000022509	rab23	99	59.167	ENSHGLG00000009371	-	99	58.333	Heterocephalus_glaber_female
ENSPREG00000022509	rab23	99	72.881	ENSHGLG00000013030	-	99	72.881	Heterocephalus_glaber_female
ENSPREG00000022509	rab23	99	72.881	ENSHGLG00100005945	-	99	72.881	Heterocephalus_glaber_male
ENSPREG00000022509	rab23	99	59.167	ENSHGLG00100017177	-	99	58.333	Heterocephalus_glaber_male
ENSPREG00000022509	rab23	100	92.647	ENSHCOG00000013919	rab23	100	92.647	Hippocampus_comes
ENSPREG00000022509	rab23	100	86.408	ENSIPUG00000016494	rab23	100	86.408	Ictalurus_punctatus
ENSPREG00000022509	rab23	99	71.610	ENSSTOG00000010962	RAB23	99	71.610	Ictidomys_tridecemlineatus
ENSPREG00000022509	rab23	99	72.034	ENSJJAG00000020094	Rab23	99	72.034	Jaculus_jaculus
ENSPREG00000022509	rab23	100	82.979	ENSKMAG00000018270	rab23	100	82.979	Kryptolebias_marmoratus
ENSPREG00000022509	rab23	100	94.608	ENSLBEG00000013176	rab23	100	94.608	Labrus_bergylta
ENSPREG00000022509	rab23	100	73.418	ENSLACG00000004025	RAB23	100	73.418	Latimeria_chalumnae
ENSPREG00000022509	rab23	100	73.750	ENSLOCG00000016999	rab23	100	73.333	Lepisosteus_oculatus
ENSPREG00000022509	rab23	99	72.881	ENSLAFG00000007209	RAB23	99	72.881	Loxodonta_africana
ENSPREG00000022509	rab23	99	72.458	ENSMFAG00000032369	RAB23	99	72.458	Macaca_fascicularis
ENSPREG00000022509	rab23	99	72.458	ENSMMUG00000018003	RAB23	99	72.458	Macaca_mulatta
ENSPREG00000022509	rab23	99	72.458	ENSMNEG00000037012	RAB23	99	72.458	Macaca_nemestrina
ENSPREG00000022509	rab23	99	72.458	ENSMLEG00000042429	RAB23	99	72.458	Mandrillus_leucophaeus
ENSPREG00000022509	rab23	100	95.098	ENSMAMG00000015456	rab23	100	95.098	Mastacembelus_armatus
ENSPREG00000022509	rab23	100	94.608	ENSMZEG00005005441	rab23	100	94.608	Maylandia_zebra
ENSPREG00000022509	rab23	99	71.186	ENSMGAG00000013882	RAB23	99	71.186	Meleagris_gallopavo
ENSPREG00000022509	rab23	99	72.881	ENSMICG00000014037	RAB23	99	72.881	Microcebus_murinus
ENSPREG00000022509	rab23	99	72.034	ENSMOCG00000000444	Rab23	99	72.034	Microtus_ochrogaster
ENSPREG00000022509	rab23	100	95.588	ENSMMOG00000007703	rab23	100	95.588	Mola_mola
ENSPREG00000022509	rab23	99	72.034	ENSMODG00000018720	RAB23	99	72.034	Monodelphis_domestica
ENSPREG00000022509	rab23	100	93.137	ENSMALG00000002136	rab23	100	93.137	Monopterus_albus
ENSPREG00000022509	rab23	99	71.186	MGP_CAROLIEiJ_G0014015	Rab23	99	71.186	Mus_caroli
ENSPREG00000022509	rab23	99	71.186	ENSMUSG00000004768	Rab23	99	70.763	Mus_musculus
ENSPREG00000022509	rab23	99	70.763	MGP_PahariEiJ_G0027261	Rab23	99	70.763	Mus_pahari
ENSPREG00000022509	rab23	99	70.763	MGP_SPRETEiJ_G0014820	Rab23	99	70.763	Mus_spretus
ENSPREG00000022509	rab23	99	70.886	ENSMPUG00000002642	RAB23	99	70.886	Mustela_putorius_furo
ENSPREG00000022509	rab23	99	72.881	ENSMLUG00000004058	RAB23	99	72.881	Myotis_lucifugus
ENSPREG00000022509	rab23	99	71.610	ENSNGAG00000018038	Rab23	99	71.610	Nannospalax_galili
ENSPREG00000022509	rab23	100	94.608	ENSNBRG00000013691	rab23	100	94.608	Neolamprologus_brichardi
ENSPREG00000022509	rab23	99	72.458	ENSNLEG00000027830	RAB23	99	72.458	Nomascus_leucogenys
ENSPREG00000022509	rab23	99	70.763	ENSODEG00000016056	RAB23	99	70.763	Octodon_degus
ENSPREG00000022509	rab23	100	82.203	ENSONIG00000009749	rab23	100	82.203	Oreochromis_niloticus
ENSPREG00000022509	rab23	99	71.610	ENSOANG00000001398	RAB23	99	71.610	Ornithorhynchus_anatinus
ENSPREG00000022509	rab23	99	72.458	ENSOCUG00000004816	RAB23	99	72.458	Oryctolagus_cuniculus
ENSPREG00000022509	rab23	100	90.686	ENSORLG00000010115	rab23	100	90.686	Oryzias_latipes
ENSPREG00000022509	rab23	100	90.686	ENSORLG00020020220	rab23	100	90.686	Oryzias_latipes_hni
ENSPREG00000022509	rab23	100	90.686	ENSORLG00015004033	rab23	100	90.686	Oryzias_latipes_hsok
ENSPREG00000022509	rab23	100	92.157	ENSOMEG00000001706	rab23	100	92.157	Oryzias_melastigma
ENSPREG00000022509	rab23	99	71.610	ENSOGAG00000005675	RAB23	99	71.610	Otolemur_garnettii
ENSPREG00000022509	rab23	99	70.763	ENSOARG00000005749	RAB23	99	70.763	Ovis_aries
ENSPREG00000022509	rab23	99	72.458	ENSPPAG00000010023	RAB23	99	72.458	Pan_paniscus
ENSPREG00000022509	rab23	99	71.610	ENSPPRG00000012453	RAB23	99	71.610	Panthera_pardus
ENSPREG00000022509	rab23	99	72.034	ENSPTIG00000009435	RAB23	99	72.034	Panthera_tigris_altaica
ENSPREG00000022509	rab23	99	72.458	ENSPTRG00000043341	RAB23	99	72.458	Pan_troglodytes
ENSPREG00000022509	rab23	99	72.458	ENSPANG00000017772	RAB23	99	72.458	Papio_anubis
ENSPREG00000022509	rab23	78	93.750	ENSPKIG00000024310	rab23	79	93.750	Paramormyrops_kingsleyae
ENSPREG00000022509	rab23	99	70.763	ENSPSIG00000015579	RAB23	99	70.339	Pelodiscus_sinensis
ENSPREG00000022509	rab23	100	89.706	ENSPMGG00000008577	rab23	100	89.706	Periophthalmus_magnuspinnatus
ENSPREG00000022509	rab23	99	72.034	ENSPEMG00000023271	Rab23	99	72.034	Peromyscus_maniculatus_bairdii
ENSPREG00000022509	rab23	100	60.256	ENSPMAG00000006835	-	100	60.256	Petromyzon_marinus
ENSPREG00000022509	rab23	99	71.610	ENSPCIG00000007267	RAB23	99	71.610	Phascolarctos_cinereus
ENSPREG00000022509	rab23	100	86.383	ENSPFOG00000011493	rab23	100	86.383	Poecilia_formosa
ENSPREG00000022509	rab23	100	99.020	ENSPLAG00000011697	rab23	100	99.020	Poecilia_latipinna
ENSPREG00000022509	rab23	100	99.020	ENSPMEG00000017300	rab23	100	99.020	Poecilia_mexicana
ENSPREG00000022509	rab23	99	72.458	ENSPPYG00000016739	RAB23	99	72.458	Pongo_abelii
ENSPREG00000022509	rab23	99	72.881	ENSPCOG00000028471	RAB23	99	72.881	Propithecus_coquereli
ENSPREG00000022509	rab23	99	72.458	ENSPVAG00000017693	RAB23	99	72.458	Pteropus_vampyrus
ENSPREG00000022509	rab23	100	94.608	ENSPNYG00000019639	rab23	100	94.608	Pundamilia_nyererei
ENSPREG00000022509	rab23	100	87.864	ENSPNAG00000024728	rab23	100	87.864	Pygocentrus_nattereri
ENSPREG00000022509	rab23	99	71.610	ENSRNOG00000012629	Rab23	99	71.610	Rattus_norvegicus
ENSPREG00000022509	rab23	99	70.954	ENSRBIG00000030547	RAB23	99	70.954	Rhinopithecus_bieti
ENSPREG00000022509	rab23	99	72.458	ENSRROG00000035920	RAB23	99	72.458	Rhinopithecus_roxellana
ENSPREG00000022509	rab23	99	71.610	ENSSBOG00000033237	RAB23	99	71.610	Saimiri_boliviensis_boliviensis
ENSPREG00000022509	rab23	99	71.186	ENSSHAG00000006379	RAB23	99	71.186	Sarcophilus_harrisii
ENSPREG00000022509	rab23	100	88.350	ENSSFOG00015012604	rab23	100	88.350	Scleropages_formosus
ENSPREG00000022509	rab23	100	94.608	ENSSMAG00000006341	rab23	100	94.608	Scophthalmus_maximus
ENSPREG00000022509	rab23	100	96.569	ENSSDUG00000023508	rab23	100	96.569	Seriola_dumerili
ENSPREG00000022509	rab23	100	96.569	ENSSLDG00000000287	rab23	100	96.569	Seriola_lalandi_dorsalis
ENSPREG00000022509	rab23	99	71.186	ENSSARG00000013689	RAB23	99	71.186	Sorex_araneus
ENSPREG00000022509	rab23	99	72.458	ENSSPUG00000006274	RAB23	99	72.458	Sphenodon_punctatus
ENSPREG00000022509	rab23	100	96.078	ENSSPAG00000010373	rab23	100	96.078	Stegastes_partitus
ENSPREG00000022509	rab23	99	80.976	ENSSSCG00000029539	RAB23	99	80.976	Sus_scrofa
ENSPREG00000022509	rab23	99	70.763	ENSTGUG00000012794	RAB23	99	70.763	Taeniopygia_guttata
ENSPREG00000022509	rab23	100	93.627	ENSTRUG00000015697	rab23	100	93.627	Takifugu_rubripes
ENSPREG00000022509	rab23	100	80.769	ENSTNIG00000016575	rab23	100	80.769	Tetraodon_nigroviridis
ENSPREG00000022509	rab23	99	72.034	ENSUAMG00000013367	RAB23	99	72.034	Ursus_americanus
ENSPREG00000022509	rab23	99	72.034	ENSUMAG00000018629	RAB23	99	72.034	Ursus_maritimus
ENSPREG00000022509	rab23	92	55.497	ENSVPAG00000006805	RAB23	99	55.497	Vicugna_pacos
ENSPREG00000022509	rab23	99	72.458	ENSVVUG00000008535	RAB23	99	72.458	Vulpes_vulpes
ENSPREG00000022509	rab23	100	65.966	ENSXETG00000004449	rab23	100	65.966	Xenopus_tropicalis
ENSPREG00000022509	rab23	100	85.532	ENSXCOG00000011864	rab23	100	85.532	Xiphophorus_couchianus
ENSPREG00000022509	rab23	100	85.957	ENSXMAG00000009387	rab23	100	85.957	Xiphophorus_maculatus