EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000022753 (Gene tree)
Gene ID: 103477027
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 14528 bases
Position: chrLG15:19179266-19193793
Accession: 103477027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000033568	SpoU_methylase	PF00588.19	6.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000033947	-	7257	XM_008429869	ENSPREP00000033568	1626 (aa)	XP_008428091	UPI0004A4ED34

Gene Model

Click here to download ENSPREG00000022753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000022753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000022753	si:dkey-85a20.4	85	45.136	ENSG00000059588	TARBP1	93	43.425	Homo_sapiens
ENSPREG00000022753	si:dkey-85a20.4	99	74.954	ENSAPOG00000016419	si:dkey-85a20.4	99	74.893	Acanthochromis_polyacanthus
ENSPREG00000022753	si:dkey-85a20.4	84	44.357	ENSAMEG00000003359	TARBP1	99	44.540	Ailuropoda_melanoleuca
ENSPREG00000022753	si:dkey-85a20.4	99	69.664	ENSATEG00000020266	si:dkey-85a20.4	99	69.792	Anabas_testudineus
ENSPREG00000022753	si:dkey-85a20.4	83	46.347	ENSAPLG00000007666	TARBP1	99	47.006	Anas_platyrhynchos
ENSPREG00000022753	si:dkey-85a20.4	83	43.991	ENSACAG00000001142	TARBP1	99	40.342	Anolis_carolinensis
ENSPREG00000022753	si:dkey-85a20.4	86	44.452	ENSANAG00000022031	TARBP1	89	44.592	Aotus_nancymaae
ENSPREG00000022753	si:dkey-85a20.4	78	54.776	ENSBTAG00000004517	TARBP1	99	54.776	Bos_taurus
ENSPREG00000022753	si:dkey-85a20.4	99	41.876	ENSCJAG00000018155	TARBP1	99	41.935	Callithrix_jacchus
ENSPREG00000022753	si:dkey-85a20.4	85	44.859	ENSCAFG00000011533	TARBP1	98	44.859	Canis_familiaris
ENSPREG00000022753	si:dkey-85a20.4	85	44.954	ENSCAFG00020027141	TARBP1	85	44.884	Canis_lupus_dingo
ENSPREG00000022753	si:dkey-85a20.4	85	45.011	ENSCHIG00000011437	TARBP1	93	43.282	Capra_hircus
ENSPREG00000022753	si:dkey-85a20.4	80	45.030	ENSTSYG00000010382	TARBP1	96	45.181	Carlito_syrichta
ENSPREG00000022753	si:dkey-85a20.4	78	41.950	ENSCAPG00000010831	TARBP1	99	42.028	Cavia_aperea
ENSPREG00000022753	si:dkey-85a20.4	85	43.930	ENSCPOG00000013995	TARBP1	86	44.076	Cavia_porcellus
ENSPREG00000022753	si:dkey-85a20.4	82	55.372	ENSCCAG00000037278	TARBP1	85	55.207	Cebus_capucinus
ENSPREG00000022753	si:dkey-85a20.4	85	44.898	ENSCATG00000011754	TARBP1	99	41.537	Cercocebus_atys
ENSPREG00000022753	si:dkey-85a20.4	80	44.519	ENSCLAG00000003655	TARBP1	96	44.602	Chinchilla_lanigera
ENSPREG00000022753	si:dkey-85a20.4	79	45.503	ENSCSAG00000010100	TARBP1	99	45.767	Chlorocebus_sabaeus
ENSPREG00000022753	si:dkey-85a20.4	74	49.026	ENSCPBG00000005587	TARBP1	85	47.917	Chrysemys_picta_bellii
ENSPREG00000022753	si:dkey-85a20.4	83	45.303	ENSCANG00000034343	TARBP1	99	45.520	Colobus_angolensis_palliatus
ENSPREG00000022753	si:dkey-85a20.4	85	44.618	ENSCGRG00001016690	Tarbp1	87	44.452	Cricetulus_griseus_chok1gshd
ENSPREG00000022753	si:dkey-85a20.4	85	44.602	ENSCGRG00000016893	Tarbp1	94	44.381	Cricetulus_griseus_crigri
ENSPREG00000022753	si:dkey-85a20.4	99	61.776	ENSCSEG00000005255	si:dkey-85a20.4	99	66.749	Cynoglossus_semilaevis
ENSPREG00000022753	si:dkey-85a20.4	99	54.669	ENSDARG00000079055	si:dkey-85a20.4	99	68.566	Danio_rerio
ENSPREG00000022753	si:dkey-85a20.4	91	43.243	ENSDNOG00000008637	TARBP1	91	43.588	Dasypus_novemcinctus
ENSPREG00000022753	si:dkey-85a20.4	80	45.091	ENSDORG00000007984	Tarbp1	100	45.091	Dipodomys_ordii
ENSPREG00000022753	si:dkey-85a20.4	85	45.487	ENSEASG00005000252	TARBP1	86	45.416	Equus_asinus_asinus
ENSPREG00000022753	si:dkey-85a20.4	85	45.287	ENSECAG00000023673	TARBP1	99	46.797	Equus_caballus
ENSPREG00000022753	si:dkey-85a20.4	99	57.808	ENSELUG00000012193	si:dkey-85a20.4	99	57.808	Esox_lucius
ENSPREG00000022753	si:dkey-85a20.4	85	43.472	ENSFCAG00000014183	TARBP1	99	40.096	Felis_catus
ENSPREG00000022753	si:dkey-85a20.4	80	46.475	ENSFALG00000013565	TARBP1	99	46.386	Ficedula_albicollis
ENSPREG00000022753	si:dkey-85a20.4	79	43.501	ENSFDAG00000001308	TARBP1	99	43.727	Fukomys_damarensis
ENSPREG00000022753	si:dkey-85a20.4	99	69.576	ENSFHEG00000007565	si:dkey-85a20.4	99	79.625	Fundulus_heteroclitus
ENSPREG00000022753	si:dkey-85a20.4	85	61.182	ENSGMOG00000004549	si:dkey-85a20.4	99	61.325	Gadus_morhua
ENSPREG00000022753	si:dkey-85a20.4	84	44.229	ENSGALG00000011000	TARBP1	99	41.348	Gallus_gallus
ENSPREG00000022753	si:dkey-85a20.4	100	93.050	ENSGAFG00000007387	si:dkey-85a20.4	100	93.050	Gambusia_affinis
ENSPREG00000022753	si:dkey-85a20.4	86	70.331	ENSGACG00000005865	si:dkey-85a20.4	99	70.190	Gasterosteus_aculeatus
ENSPREG00000022753	si:dkey-85a20.4	84	46.303	ENSGAGG00000012102	TARBP1	89	45.992	Gopherus_agassizii
ENSPREG00000022753	si:dkey-85a20.4	84	44.650	ENSGGOG00000022879	TARBP1	99	44.875	Gorilla_gorilla
ENSPREG00000022753	si:dkey-85a20.4	100	73.313	ENSHBUG00000008877	si:dkey-85a20.4	99	73.342	Haplochromis_burtoni
ENSPREG00000022753	si:dkey-85a20.4	85	43.935	ENSHGLG00000011592	TARBP1	86	44.153	Heterocephalus_glaber_female
ENSPREG00000022753	si:dkey-85a20.4	85	44.161	ENSHGLG00100015169	TARBP1	95	44.020	Heterocephalus_glaber_male
ENSPREG00000022753	si:dkey-85a20.4	97	56.240	ENSIPUG00000005249	si:dkey-85a20.4	98	51.824	Ictalurus_punctatus
ENSPREG00000022753	si:dkey-85a20.4	82	45.015	ENSSTOG00000032291	TARBP1	96	44.835	Ictidomys_tridecemlineatus
ENSPREG00000022753	si:dkey-85a20.4	85	42.534	ENSJJAG00000017840	Tarbp1	95	42.321	Jaculus_jaculus
ENSPREG00000022753	si:dkey-85a20.4	89	70.510	ENSKMAG00000017546	si:dkey-85a20.4	98	70.767	Kryptolebias_marmoratus
ENSPREG00000022753	si:dkey-85a20.4	82	74.074	ENSLBEG00000012132	si:dkey-85a20.4	96	72.594	Labrus_bergylta
ENSPREG00000022753	si:dkey-85a20.4	99	43.313	ENSLACG00000004337	TARBP1	99	43.313	Latimeria_chalumnae
ENSPREG00000022753	si:dkey-85a20.4	99	53.064	ENSLOCG00000016214	si:dkey-85a20.4	100	53.064	Lepisosteus_oculatus
ENSPREG00000022753	si:dkey-85a20.4	85	45.154	ENSLAFG00000011394	TARBP1	95	43.279	Loxodonta_africana
ENSPREG00000022753	si:dkey-85a20.4	85	43.759	ENSMFAG00000041068	TARBP1	94	41.979	Macaca_fascicularis
ENSPREG00000022753	si:dkey-85a20.4	85	43.583	ENSMMUG00000021703	TARBP1	93	41.742	Macaca_mulatta
ENSPREG00000022753	si:dkey-85a20.4	85	44.968	ENSMNEG00000045002	TARBP1	93	43.005	Macaca_nemestrina
ENSPREG00000022753	si:dkey-85a20.4	83	45.461	ENSMLEG00000044182	TARBP1	99	45.606	Mandrillus_leucophaeus
ENSPREG00000022753	si:dkey-85a20.4	100	67.789	ENSMAMG00000021760	si:dkey-85a20.4	100	67.809	Mastacembelus_armatus
ENSPREG00000022753	si:dkey-85a20.4	100	73.006	ENSMZEG00005005751	si:dkey-85a20.4	100	73.006	Maylandia_zebra
ENSPREG00000022753	si:dkey-85a20.4	85	44.837	ENSMAUG00000020968	Tarbp1	87	44.673	Mesocricetus_auratus
ENSPREG00000022753	si:dkey-85a20.4	85	40.915	ENSMICG00000015280	TARBP1	99	38.241	Microcebus_murinus
ENSPREG00000022753	si:dkey-85a20.4	85	44.318	ENSMOCG00000004128	Tarbp1	87	44.168	Microtus_ochrogaster
ENSPREG00000022753	si:dkey-85a20.4	99	66.066	ENSMMOG00000007795	si:dkey-85a20.4	99	65.755	Mola_mola
ENSPREG00000022753	si:dkey-85a20.4	85	44.319	ENSMODG00000008504	TARBP1	99	41.082	Monodelphis_domestica
ENSPREG00000022753	si:dkey-85a20.4	99	68.595	ENSMALG00000002916	si:dkey-85a20.4	99	68.595	Monopterus_albus
ENSPREG00000022753	si:dkey-85a20.4	85	44.097	MGP_CAROLIEiJ_G0031729	Tarbp1	78	59.459	Mus_caroli
ENSPREG00000022753	si:dkey-85a20.4	85	44.130	ENSMUSG00000090290	Tarbp1	87	43.980	Mus_musculus
ENSPREG00000022753	si:dkey-85a20.4	85	44.784	MGP_PahariEiJ_G0023326	Tarbp1	87	44.713	Mus_pahari
ENSPREG00000022753	si:dkey-85a20.4	85	44.193	MGP_SPRETEiJ_G0032846	Tarbp1	87	44.122	Mus_spretus
ENSPREG00000022753	si:dkey-85a20.4	76	45.419	ENSMPUG00000002802	TARBP1	99	45.419	Mustela_putorius_furo
ENSPREG00000022753	si:dkey-85a20.4	83	43.781	ENSMLUG00000002414	TARBP1	99	43.925	Myotis_lucifugus
ENSPREG00000022753	si:dkey-85a20.4	85	45.276	ENSNLEG00000002518	TARBP1	99	42.137	Nomascus_leucogenys
ENSPREG00000022753	si:dkey-85a20.4	68	53.577	ENSOPRG00000013822	TARBP1	68	53.577	Ochotona_princeps
ENSPREG00000022753	si:dkey-85a20.4	85	44.168	ENSODEG00000005238	TARBP1	89	44.168	Octodon_degus
ENSPREG00000022753	si:dkey-85a20.4	85	75.071	ENSONIG00000009789	si:dkey-85a20.4	100	75.214	Oreochromis_niloticus
ENSPREG00000022753	si:dkey-85a20.4	85	44.358	ENSOCUG00000017418	TARBP1	99	40.923	Oryctolagus_cuniculus
ENSPREG00000022753	si:dkey-85a20.4	99	67.425	ENSORLG00000010529	si:dkey-85a20.4	99	67.609	Oryzias_latipes
ENSPREG00000022753	si:dkey-85a20.4	99	67.240	ENSORLG00020019264	si:dkey-85a20.4	99	67.425	Oryzias_latipes_hni
ENSPREG00000022753	si:dkey-85a20.4	99	67.117	ENSORLG00015003276	si:dkey-85a20.4	99	67.302	Oryzias_latipes_hsok
ENSPREG00000022753	si:dkey-85a20.4	85	43.279	ENSOGAG00000002379	TARBP1	99	39.976	Otolemur_garnettii
ENSPREG00000022753	si:dkey-85a20.4	85	44.996	ENSOARG00000003434	TARBP1	92	45.018	Ovis_aries
ENSPREG00000022753	si:dkey-85a20.4	83	45.887	ENSPPAG00000028097	TARBP1	99	46.260	Pan_paniscus
ENSPREG00000022753	si:dkey-85a20.4	80	46.170	ENSPPRG00000013561	TARBP1	86	46.096	Panthera_pardus
ENSPREG00000022753	si:dkey-85a20.4	82	45.342	ENSPTIG00000009281	TARBP1	99	45.222	Panthera_tigris_altaica
ENSPREG00000022753	si:dkey-85a20.4	85	45.531	ENSPTRG00000002124	TARBP1	93	43.786	Pan_troglodytes
ENSPREG00000022753	si:dkey-85a20.4	85	45.011	ENSPANG00000021933	TARBP1	93	43.098	Papio_anubis
ENSPREG00000022753	si:dkey-85a20.4	99	55.811	ENSPKIG00000016716	si:dkey-85a20.4	99	55.811	Paramormyrops_kingsleyae
ENSPREG00000022753	si:dkey-85a20.4	79	46.042	ENSPSIG00000010699	TARBP1	99	46.195	Pelodiscus_sinensis
ENSPREG00000022753	si:dkey-85a20.4	85	44.634	ENSPEMG00000006888	Tarbp1	92	44.413	Peromyscus_maniculatus_bairdii
ENSPREG00000022753	si:dkey-85a20.4	90	69.347	ENSPCIG00000029710	TARBP1	98	69.347	Phascolarctos_cinereus
ENSPREG00000022753	si:dkey-85a20.4	86	94.571	ENSPFOG00000013020	si:dkey-85a20.4	100	94.571	Poecilia_formosa
ENSPREG00000022753	si:dkey-85a20.4	100	95.264	ENSPLAG00000006044	si:dkey-85a20.4	100	95.264	Poecilia_latipinna
ENSPREG00000022753	si:dkey-85a20.4	100	95.326	ENSPMEG00000017857	si:dkey-85a20.4	100	95.326	Poecilia_mexicana
ENSPREG00000022753	si:dkey-85a20.4	77	45.035	ENSPPYG00000000102	TARBP1	84	45.209	Pongo_abelii
ENSPREG00000022753	si:dkey-85a20.4	67	75.658	ENSPCAG00000004808	TARBP1	75	75.658	Procavia_capensis
ENSPREG00000022753	si:dkey-85a20.4	85	43.481	ENSPCOG00000005666	TARBP1	93	41.613	Propithecus_coquereli
ENSPREG00000022753	si:dkey-85a20.4	79	60.563	ENSPVAG00000014798	TARBP1	85	39.957	Pteropus_vampyrus
ENSPREG00000022753	si:dkey-85a20.4	99	70.254	ENSPNYG00000019135	si:dkey-85a20.4	99	70.254	Pundamilia_nyererei
ENSPREG00000022753	si:dkey-85a20.4	91	41.316	ENSRNOG00000053574	Tarbp1	93	41.250	Rattus_norvegicus
ENSPREG00000022753	si:dkey-85a20.4	85	42.746	ENSRBIG00000043362	TARBP1	94	42.717	Rhinopithecus_bieti
ENSPREG00000022753	si:dkey-85a20.4	85	45.007	ENSRROG00000029527	TARBP1	90	45.007	Rhinopithecus_roxellana
ENSPREG00000022753	si:dkey-85a20.4	83	45.521	ENSSBOG00000034503	TARBP1	96	45.806	Saimiri_boliviensis_boliviensis
ENSPREG00000022753	si:dkey-85a20.4	83	45.250	ENSSHAG00000000013	TARBP1	99	45.250	Sarcophilus_harrisii
ENSPREG00000022753	si:dkey-85a20.4	99	52.083	ENSSFOG00015002660	si:dkey-85a20.4	97	58.321	Scleropages_formosus
ENSPREG00000022753	si:dkey-85a20.4	100	68.272	ENSSMAG00000007081	si:dkey-85a20.4	100	68.516	Scophthalmus_maximus
ENSPREG00000022753	si:dkey-85a20.4	100	69.405	ENSSDUG00000023566	si:dkey-85a20.4	100	69.589	Seriola_dumerili
ENSPREG00000022753	si:dkey-85a20.4	99	72.940	ENSSLDG00000020200	si:dkey-85a20.4	99	73.063	Seriola_lalandi_dorsalis
ENSPREG00000022753	si:dkey-85a20.4	75	58.565	ENSSARG00000012207	TARBP1	75	58.333	Sorex_araneus
ENSPREG00000022753	si:dkey-85a20.4	86	44.366	ENSSPUG00000015364	TARBP1	99	41.400	Sphenodon_punctatus
ENSPREG00000022753	si:dkey-85a20.4	99	75.077	ENSSPAG00000007213	si:dkey-85a20.4	99	75.168	Stegastes_partitus
ENSPREG00000022753	si:dkey-85a20.4	85	44.993	ENSSSCG00000010160	TARBP1	99	45.184	Sus_scrofa
ENSPREG00000022753	si:dkey-85a20.4	80	46.491	ENSTGUG00000010214	TARBP1	100	46.491	Taeniopygia_guttata
ENSPREG00000022753	si:dkey-85a20.4	94	62.871	ENSTNIG00000016586	si:dkey-85a20.4	99	68.649	Tetraodon_nigroviridis
ENSPREG00000022753	si:dkey-85a20.4	79	41.150	ENSTTRG00000008707	TARBP1	85	41.338	Tursiops_truncatus
ENSPREG00000022753	si:dkey-85a20.4	80	44.594	ENSUMAG00000006730	TARBP1	97	44.594	Ursus_maritimus
ENSPREG00000022753	si:dkey-85a20.4	63	74.468	ENSVPAG00000007665	TARBP1	73	74.468	Vicugna_pacos
ENSPREG00000022753	si:dkey-85a20.4	84	45.154	ENSVVUG00000007460	TARBP1	98	43.500	Vulpes_vulpes
ENSPREG00000022753	si:dkey-85a20.4	83	42.878	ENSXETG00000016224	tarbp1	99	42.795	Xenopus_tropicalis
ENSPREG00000022753	si:dkey-85a20.4	83	91.281	ENSXCOG00000011779	si:dkey-85a20.4	100	91.144	Xiphophorus_couchianus
ENSPREG00000022753	si:dkey-85a20.4	64	94.370	ENSXMAG00000009600	si:dkey-85a20.4	100	94.370	Xiphophorus_maculatus