EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000023066 (Gene tree)
Gene ID: 103481808
Gene Symbol: patl2
Alias: si:ch211-103b1.2
Full Name: PAT1 homolog 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 10873 bases
Position: chrLG19:8499868-8510740
Accession: 103481808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000034055	PAT1	PF09770.9	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000034435	-	2904	XM_017310690	ENSPREP00000034055	593 (aa)	XP_017166179	-

Gene Model

Click here to download ENSPREG00000023066's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000023066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000023066	patl2	53	45.538	ENSG00000229474	PATL2	74	47.253	Homo_sapiens
ENSPREG00000023066	patl2	51	38.323	ENSG00000166889	PATL1	87	30.893	Homo_sapiens
ENSPREG00000023066	patl2	95	67.731	ENSAPOG00000022988	patl2	86	68.403	Acanthochromis_polyacanthus
ENSPREG00000023066	patl2	51	47.785	ENSAMEG00000014997	PATL2	64	46.398	Ailuropoda_melanoleuca
ENSPREG00000023066	patl2	98	68.344	ENSAOCG00000023738	patl2	82	68.831	Amphiprion_ocellaris
ENSPREG00000023066	patl2	82	76.744	ENSAPEG00000011299	patl2	83	76.744	Amphiprion_percula
ENSPREG00000023066	patl2	84	65.200	ENSATEG00000019567	patl2	87	60.263	Anabas_testudineus
ENSPREG00000023066	patl2	80	41.339	ENSAPLG00000003980	PATL2	80	42.520	Anas_platyrhynchos
ENSPREG00000023066	patl2	54	43.658	ENSACAG00000006951	-	91	43.658	Anolis_carolinensis
ENSPREG00000023066	patl2	99	66.240	ENSACLG00000010326	patl2	85	66.720	Astatotilapia_calliptera
ENSPREG00000023066	patl2	99	48.867	ENSAMXG00000020293	patl2	85	49.026	Astyanax_mexicanus
ENSPREG00000023066	patl2	50	46.372	ENSCJAG00000002379	PATL2	60	44.868	Callithrix_jacchus
ENSPREG00000023066	patl2	51	36.637	ENSCJAG00000016192	PATL1	87	30.792	Callithrix_jacchus
ENSPREG00000023066	patl2	51	47.335	ENSCAFG00000013629	PATL2	57	47.335	Canis_familiaris
ENSPREG00000023066	patl2	51	47.335	ENSCAFG00020022169	PATL2	56	47.335	Canis_lupus_dingo
ENSPREG00000023066	patl2	51	36.527	ENSCAFG00020001648	PATL1	86	30.257	Canis_lupus_dingo
ENSPREG00000023066	patl2	54	45.294	ENSCHIG00000026665	PATL2	63	44.540	Capra_hircus
ENSPREG00000023066	patl2	52	44.648	ENSTSYG00000032456	PATL2	58	45.679	Carlito_syrichta
ENSPREG00000023066	patl2	51	45.570	ENSCCAG00000025261	PATL2	61	44.737	Cebus_capucinus
ENSPREG00000023066	patl2	51	36.637	ENSCCAG00000023759	PATL1	87	30.848	Cebus_capucinus
ENSPREG00000023066	patl2	51	36.637	ENSCATG00000009629	PATL1	87	30.848	Cercocebus_atys
ENSPREG00000023066	patl2	51	46.226	ENSCATG00000034794	PATL2	74	46.886	Cercocebus_atys
ENSPREG00000023066	patl2	50	43.312	ENSCLAG00000014407	PATL2	66	42.319	Chinchilla_lanigera
ENSPREG00000023066	patl2	51	45.912	ENSCSAG00000009601	PATL2	61	44.023	Chlorocebus_sabaeus
ENSPREG00000023066	patl2	51	36.637	ENSCSAG00000006095	PATL1	56	35.714	Chlorocebus_sabaeus
ENSPREG00000023066	patl2	51	37.612	ENSCHOG00000001611	PATL1	53	38.095	Choloepus_hoffmanni
ENSPREG00000023066	patl2	74	43.261	ENSCPBG00000006150	PATL2	80	37.949	Chrysemys_picta_bellii
ENSPREG00000023066	patl2	51	45.253	ENSCANG00000013856	PATL2	61	44.282	Colobus_angolensis_palliatus
ENSPREG00000023066	patl2	51	36.637	ENSCANG00000039197	PATL1	96	30.175	Colobus_angolensis_palliatus
ENSPREG00000023066	patl2	61	42.487	ENSCGRG00001010801	Patl2	73	42.857	Cricetulus_griseus_chok1gshd
ENSPREG00000023066	patl2	61	42.487	ENSCGRG00000013007	Patl2	73	42.857	Cricetulus_griseus_crigri
ENSPREG00000023066	patl2	89	66.917	ENSCSEG00000009438	patl2	77	66.917	Cynoglossus_semilaevis
ENSPREG00000023066	patl2	81	66.572	ENSCVAG00000016203	patl2	79	66.572	Cyprinodon_variegatus
ENSPREG00000023066	patl2	84	55.179	ENSDARG00000089567	patl2	85	50.318	Danio_rerio
ENSPREG00000023066	patl2	51	36.418	ENSDNOG00000038865	PATL1	60	37.015	Dasypus_novemcinctus
ENSPREG00000023066	patl2	50	47.403	ENSDORG00000026649	Patl2	61	46.855	Dipodomys_ordii
ENSPREG00000023066	patl2	50	48.243	ENSFCAG00000027170	PATL2	60	47.181	Felis_catus
ENSPREG00000023066	patl2	51	36.336	ENSFCAG00000015573	PATL1	87	30.147	Felis_catus
ENSPREG00000023066	patl2	85	39.194	ENSFALG00000009768	PATL2	86	35.938	Ficedula_albicollis
ENSPREG00000023066	patl2	69	78.926	ENSFHEG00000009727	patl2	83	78.926	Fundulus_heteroclitus
ENSPREG00000023066	patl2	55	65.861	ENSGMOG00000005666	patl2	83	65.861	Gadus_morhua
ENSPREG00000023066	patl2	85	37.268	ENSGALG00000002167	PATL2	86	35.549	Gallus_gallus
ENSPREG00000023066	patl2	99	81.506	ENSGAFG00000019344	patl2	86	82.651	Gambusia_affinis
ENSPREG00000023066	patl2	95	31.014	ENSGAGG00000004461	PATL1	86	31.118	Gopherus_agassizii
ENSPREG00000023066	patl2	53	45.231	ENSGGOG00000025923	PATL2	62	44.699	Gorilla_gorilla
ENSPREG00000023066	patl2	51	37.015	ENSGGOG00000004335	PATL1	87	30.848	Gorilla_gorilla
ENSPREG00000023066	patl2	95	65.919	ENSHBUG00000005929	patl2	84	57.483	Haplochromis_burtoni
ENSPREG00000023066	patl2	98	63.029	ENSHCOG00000016754	patl2	85	64.007	Hippocampus_comes
ENSPREG00000023066	patl2	99	46.870	ENSIPUG00000020692	patl2	84	48.293	Ictalurus_punctatus
ENSPREG00000023066	patl2	51	45.597	ENSSTOG00000033848	PATL2	61	44.477	Ictidomys_tridecemlineatus
ENSPREG00000023066	patl2	98	69.870	ENSKMAG00000021275	patl2	85	70.178	Kryptolebias_marmoratus
ENSPREG00000023066	patl2	88	38.602	ENSLACG00000005291	-	79	38.935	Latimeria_chalumnae
ENSPREG00000023066	patl2	56	31.183	ENSLACG00000004640	PATL1	51	31.267	Latimeria_chalumnae
ENSPREG00000023066	patl2	89	30.546	ENSLOCG00000000717	patl1	72	30.369	Lepisosteus_oculatus
ENSPREG00000023066	patl2	50	47.188	ENSLAFG00000031124	PATL2	63	46.064	Loxodonta_africana
ENSPREG00000023066	patl2	51	36.637	ENSMFAG00000040851	PATL1	87	30.848	Macaca_fascicularis
ENSPREG00000023066	patl2	51	46.082	ENSMFAG00000003565	PATL2	61	44.868	Macaca_fascicularis
ENSPREG00000023066	patl2	51	36.637	ENSMMUG00000017287	PATL1	87	30.848	Macaca_mulatta
ENSPREG00000023066	patl2	51	36.637	ENSMNEG00000038692	PATL1	87	30.848	Macaca_nemestrina
ENSPREG00000023066	patl2	51	45.912	ENSMNEG00000034510	PATL2	61	44.315	Macaca_nemestrina
ENSPREG00000023066	patl2	51	46.519	ENSMLEG00000042248	PATL2	61	45.294	Mandrillus_leucophaeus
ENSPREG00000023066	patl2	51	36.637	ENSMLEG00000030044	PATL1	87	30.848	Mandrillus_leucophaeus
ENSPREG00000023066	patl2	98	63.158	ENSMAMG00000013327	patl2	86	63.729	Mastacembelus_armatus
ENSPREG00000023066	patl2	99	66.240	ENSMZEG00005014292	patl2	85	66.720	Maylandia_zebra
ENSPREG00000023066	patl2	85	40.516	ENSMGAG00000001309	PATL2	84	40.901	Meleagris_gallopavo
ENSPREG00000023066	patl2	55	36.438	ENSMGAG00000003406	PATL1	51	36.986	Meleagris_gallopavo
ENSPREG00000023066	patl2	60	42.744	ENSMAUG00000001008	Patl2	68	42.971	Mesocricetus_auratus
ENSPREG00000023066	patl2	51	31.672	ENSMICG00000004172	PATL1	55	36.240	Microcebus_murinus
ENSPREG00000023066	patl2	55	43.380	ENSMOCG00000015367	Patl2	64	43.380	Microtus_ochrogaster
ENSPREG00000023066	patl2	82	73.130	ENSMMOG00000001299	patl2	85	73.130	Mola_mola
ENSPREG00000023066	patl2	52	44.985	ENSMODG00000017690	PATL2	57	44.985	Monodelphis_domestica
ENSPREG00000023066	patl2	99	66.395	ENSMALG00000008131	patl2	81	66.884	Monopterus_albus
ENSPREG00000023066	patl2	55	42.541	MGP_CAROLIEiJ_G0024205	Patl2	65	42.659	Mus_caroli
ENSPREG00000023066	patl2	55	42.778	ENSMUSG00000027233	Patl2	65	43.175	Mus_musculus
ENSPREG00000023066	patl2	55	42.500	MGP_PahariEiJ_G0025648	Patl2	65	42.897	Mus_pahari
ENSPREG00000023066	patl2	55	42.340	MGP_SPRETEiJ_G0025122	Patl2	65	42.458	Mus_spretus
ENSPREG00000023066	patl2	51	37.168	ENSMLUG00000011169	PATL1	87	30.060	Myotis_lucifugus
ENSPREG00000023066	patl2	51	40.061	ENSNGAG00000020368	Patl2	67	39.943	Nannospalax_galili
ENSPREG00000023066	patl2	99	59.609	ENSNBRG00000011745	patl2	84	59.772	Neolamprologus_brichardi
ENSPREG00000023066	patl2	51	36.716	ENSNLEG00000013081	PATL1	87	30.194	Nomascus_leucogenys
ENSPREG00000023066	patl2	51	45.570	ENSNLEG00000005673	PATL2	61	44.023	Nomascus_leucogenys
ENSPREG00000023066	patl2	99	66.507	ENSONIG00000011519	patl2	86	66.986	Oreochromis_niloticus
ENSPREG00000023066	patl2	52	45.294	ENSOANG00000001538	-	74	45.294	Ornithorhynchus_anatinus
ENSPREG00000023066	patl2	99	66.074	ENSORLG00000005780	patl2	85	66.883	Oryzias_latipes
ENSPREG00000023066	patl2	99	66.181	ENSORLG00020016506	patl2	82	66.829	Oryzias_latipes_hni
ENSPREG00000023066	patl2	99	65.913	ENSORLG00015014500	patl2	85	66.721	Oryzias_latipes_hsok
ENSPREG00000023066	patl2	99	68.608	ENSOMEG00000021628	patl2	85	68.932	Oryzias_melastigma
ENSPREG00000023066	patl2	51	37.237	ENSOGAG00000004351	PATL1	87	31.131	Otolemur_garnettii
ENSPREG00000023066	patl2	50	46.154	ENSOGAG00000004709	PATL2	60	44.970	Otolemur_garnettii
ENSPREG00000023066	patl2	55	44.167	ENSOARG00000003762	PATL2	64	44.167	Ovis_aries
ENSPREG00000023066	patl2	51	37.015	ENSPPAG00000034275	PATL1	87	30.556	Pan_paniscus
ENSPREG00000023066	patl2	53	45.538	ENSPPAG00000007221	PATL2	62	44.986	Pan_paniscus
ENSPREG00000023066	patl2	51	36.336	ENSPPRG00000020639	PATL1	87	30.147	Panthera_pardus
ENSPREG00000023066	patl2	50	47.923	ENSPPRG00000004279	PATL2	60	46.884	Panthera_pardus
ENSPREG00000023066	patl2	51	36.336	ENSPTIG00000019298	PATL1	87	30.147	Panthera_tigris_altaica
ENSPREG00000023066	patl2	50	47.923	ENSPTIG00000018964	PATL2	60	46.884	Panthera_tigris_altaica
ENSPREG00000023066	patl2	53	45.538	ENSPTRG00000041536	PATL2	62	44.986	Pan_troglodytes
ENSPREG00000023066	patl2	51	36.637	ENSPANG00000035620	PATL1	87	30.848	Papio_anubis
ENSPREG00000023066	patl2	51	46.226	ENSPANG00000018026	PATL2	61	44.315	Papio_anubis
ENSPREG00000023066	patl2	98	51.555	ENSPKIG00000016887	patl2	84	52.288	Paramormyrops_kingsleyae
ENSPREG00000023066	patl2	52	42.378	ENSPSIG00000017690	PATL2	79	42.378	Pelodiscus_sinensis
ENSPREG00000023066	patl2	98	60.745	ENSPMGG00000014550	patl2	87	60.774	Periophthalmus_magnuspinnatus
ENSPREG00000023066	patl2	55	43.785	ENSPEMG00000016509	Patl2	64	43.662	Peromyscus_maniculatus_bairdii
ENSPREG00000023066	patl2	58	45.326	ENSPCIG00000018256	PATL2	69	45.326	Phascolarctos_cinereus
ENSPREG00000023066	patl2	99	86.349	ENSPFOG00000007305	patl2	86	86.349	Poecilia_formosa
ENSPREG00000023066	patl2	99	85.197	ENSPLAG00000020713	patl2	86	86.184	Poecilia_latipinna
ENSPREG00000023066	patl2	99	86.020	ENSPMEG00000018942	patl2	86	86.020	Poecilia_mexicana
ENSPREG00000023066	patl2	51	36.228	ENSPPYG00000003230	PATL1	87	30.454	Pongo_abelii
ENSPREG00000023066	patl2	51	37.015	ENSPCOG00000020770	PATL1	86	30.606	Propithecus_coquereli
ENSPREG00000023066	patl2	97	66.816	ENSPNYG00000017381	patl2	84	57.119	Pundamilia_nyererei
ENSPREG00000023066	patl2	98	47.680	ENSPNAG00000002315	patl2	84	49.427	Pygocentrus_nattereri
ENSPREG00000023066	patl2	55	42.737	ENSRNOG00000017061	Patl2	65	43.575	Rattus_norvegicus
ENSPREG00000023066	patl2	51	36.637	ENSRROG00000032861	PATL1	87	30.556	Rhinopithecus_roxellana
ENSPREG00000023066	patl2	51	36.716	ENSSBOG00000025195	PATL1	87	30.702	Saimiri_boliviensis_boliviensis
ENSPREG00000023066	patl2	86	53.232	ENSSFOG00015000720	patl2	83	50.083	Scleropages_formosus
ENSPREG00000023066	patl2	77	68.433	ENSSMAG00000017262	patl2	86	77.620	Scophthalmus_maximus
ENSPREG00000023066	patl2	99	68.387	ENSSDUG00000022927	patl2	86	68.871	Seriola_dumerili
ENSPREG00000023066	patl2	98	66.557	ENSSLDG00000017922	patl2	88	66.941	Seriola_lalandi_dorsalis
ENSPREG00000023066	patl2	51	36.905	ENSSARG00000009600	PATL1	51	35.075	Sorex_araneus
ENSPREG00000023066	patl2	98	67.343	ENSSPAG00000004784	patl2	88	67.736	Stegastes_partitus
ENSPREG00000023066	patl2	52	44.985	ENSTGUG00000004619	-	82	44.985	Taeniopygia_guttata
ENSPREG00000023066	patl2	84	68.400	ENSTRUG00000005647	patl2	85	62.945	Takifugu_rubripes
ENSPREG00000023066	patl2	51	46.835	ENSUAMG00000018533	PATL2	61	45.533	Ursus_americanus
ENSPREG00000023066	patl2	51	46.835	ENSUMAG00000007738	PATL2	61	45.533	Ursus_maritimus
ENSPREG00000023066	patl2	51	36.527	ENSVVUG00000016668	PATL1	86	30.257	Vulpes_vulpes
ENSPREG00000023066	patl2	51	47.022	ENSVVUG00000011576	PATL2	57	47.022	Vulpes_vulpes
ENSPREG00000023066	patl2	81	39.623	ENSXETG00000014167	patl2	84	40.619	Xenopus_tropicalis
ENSPREG00000023066	patl2	51	37.942	ENSXCOG00000010808	patl1	54	38.264	Xiphophorus_couchianus
ENSPREG00000023066	patl2	99	81.384	ENSXMAG00000018464	patl2	85	82.372	Xiphophorus_maculatus