EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000023139 (Gene tree)
Gene ID: 103481398
Gene Symbol: eif3c
Alias: eif3s8|fi37c04|wu:fb34a08|wu:fi37c04|zgc:66128
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 10222 bases
Position: chrLG19:8882021-8892242
Accession: 103481398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000034160	eIF-3c_N	PF05470.12	1.4e-244	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000034541	-	2574	XM_008436803	ENSPREP00000034160	857 (aa)	XP_008435025	-

Gene Model

Click here to download ENSPREG00000023139's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000023139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000023139	eif3c	100	71.475	ENSG00000205609	EIF3CL	100	71.475	Homo_sapiens
ENSPREG00000023139	eif3c	70	96.844	ENSAPOG00000024092	eif3c	100	88.578	Acanthochromis_polyacanthus
ENSPREG00000023139	eif3c	100	86.562	ENSACIG00000015082	eif3c	100	86.712	Amphilophus_citrinellus
ENSPREG00000023139	eif3c	100	86.176	ENSAOCG00000021466	eif3c	100	86.902	Amphiprion_ocellaris
ENSPREG00000023139	eif3c	100	85.906	ENSAPEG00000010521	eif3c	100	86.689	Amphiprion_percula
ENSPREG00000023139	eif3c	96	97.500	ENSATEG00000019001	eif3c	100	81.935	Anabas_testudineus
ENSPREG00000023139	eif3c	92	83.861	ENSACAG00000005937	-	97	79.094	Anolis_carolinensis
ENSPREG00000023139	eif3c	100	71.553	ENSANAG00000020640	-	100	71.335	Aotus_nancymaae
ENSPREG00000023139	eif3c	100	83.676	ENSACLG00000009322	eif3c	100	82.648	Astatotilapia_calliptera
ENSPREG00000023139	eif3c	100	87.200	ENSACLG00000009347	eif3c	100	87.931	Astatotilapia_calliptera
ENSPREG00000023139	eif3c	99	80.698	ENSAMXG00000020949	eif3c	100	79.440	Astyanax_mexicanus
ENSPREG00000023139	eif3c	70	83.582	ENSBTAG00000006543	EIF3CL	100	72.350	Bos_taurus
ENSPREG00000023139	eif3c	99	42.570	WBGene00001226	eif-3.C	97	43.207	Caenorhabditis_elegans
ENSPREG00000023139	eif3c	100	71.661	ENSCJAG00000006341	-	100	78.202	Callithrix_jacchus
ENSPREG00000023139	eif3c	96	83.914	ENSCAFG00020017587	-	100	71.772	Canis_lupus_dingo
ENSPREG00000023139	eif3c	89	81.626	ENSCHIG00000024795	-	100	73.090	Capra_hircus
ENSPREG00000023139	eif3c	96	67.015	ENSCAPG00000015887	-	99	67.555	Cavia_aperea
ENSPREG00000023139	eif3c	99	62.500	ENSCCAG00000029099	-	99	62.205	Cebus_capucinus
ENSPREG00000023139	eif3c	100	73.043	ENSCCAG00000034928	-	100	72.467	Cebus_capucinus
ENSPREG00000023139	eif3c	96	83.416	ENSCLAG00000011094	-	100	71.366	Chinchilla_lanigera
ENSPREG00000023139	eif3c	58	67.954	ENSCHOG00000003120	-	88	67.954	Choloepus_hoffmanni
ENSPREG00000023139	eif3c	78	87.580	ENSCPBG00000012407	-	91	70.902	Chrysemys_picta_bellii
ENSPREG00000023139	eif3c	92	51.075	ENSCSAVG00000006744	-	99	51.008	Ciona_savignyi
ENSPREG00000023139	eif3c	100	71.444	ENSCANG00000033626	-	100	71.335	Colobus_angolensis_palliatus
ENSPREG00000023139	eif3c	70	83.085	ENSCGRG00001015265	EIF3C	100	70.865	Cricetulus_griseus_chok1gshd
ENSPREG00000023139	eif3c	96	93.125	ENSCSEG00000017770	eif3c	100	83.498	Cynoglossus_semilaevis
ENSPREG00000023139	eif3c	100	87.141	ENSCVAG00000005402	eif3c	100	87.852	Cyprinodon_variegatus
ENSPREG00000023139	eif3c	100	85.735	ENSDARG00000016443	eif3c	100	81.210	Danio_rerio
ENSPREG00000023139	eif3c	70	83.914	ENSDNOG00000031497	-	75	76.574	Dasypus_novemcinctus
ENSPREG00000023139	eif3c	100	71.916	ENSDORG00000016471	Eif3c	100	73.589	Dipodomys_ordii
ENSPREG00000023139	eif3c	80	85.388	ENSETEG00000013527	-	92	85.388	Echinops_telfairi
ENSPREG00000023139	eif3c	99	62.418	ENSEBUG00000001629	eif3c	99	62.651	Eptatretus_burgeri
ENSPREG00000023139	eif3c	96	63.229	ENSECAG00000008746	-	100	75.741	Equus_caballus
ENSPREG00000023139	eif3c	66	55.654	ENSEEUG00000000726	-	64	54.514	Erinaceus_europaeus
ENSPREG00000023139	eif3c	100	81.311	ENSELUG00000022257	eif3c	99	85.765	Esox_lucius
ENSPREG00000023139	eif3c	96	83.748	ENSFDAG00000003588	-	100	73.453	Fukomys_damarensis
ENSPREG00000023139	eif3c	96	97.500	ENSFHEG00000014154	EIF3C	100	83.621	Fundulus_heteroclitus
ENSPREG00000023139	eif3c	84	84.577	ENSGAGG00000006666	-	100	72.123	Gopherus_agassizii
ENSPREG00000023139	eif3c	96	83.748	ENSHGLG00000011445	EIF3C	100	71.335	Heterocephalus_glaber_female
ENSPREG00000023139	eif3c	96	83.748	ENSHGLG00100000217	EIF3C	100	71.335	Heterocephalus_glaber_male
ENSPREG00000023139	eif3c	70	93.322	ENSIPUG00000016878	eif3c	99	82.200	Ictalurus_punctatus
ENSPREG00000023139	eif3c	70	82.421	ENSJJAG00000012722	Eif3c	100	71.288	Jaculus_jaculus
ENSPREG00000023139	eif3c	99	84.471	ENSKMAG00000021662	eif3c	100	82.303	Kryptolebias_marmoratus
ENSPREG00000023139	eif3c	96	95.000	ENSLBEG00000023370	eif3c	97	87.738	Labrus_bergylta
ENSPREG00000023139	eif3c	90	89.041	ENSLACG00000000770	eif3c	99	75.900	Latimeria_chalumnae
ENSPREG00000023139	eif3c	100	87.371	ENSMAMG00000012512	eif3c	100	87.945	Mastacembelus_armatus
ENSPREG00000023139	eif3c	100	83.676	ENSMZEG00005013685	eif3c	100	82.589	Maylandia_zebra
ENSPREG00000023139	eif3c	100	86.735	ENSMZEG00005013699	eif3c	100	87.314	Maylandia_zebra
ENSPREG00000023139	eif3c	92	83.914	ENSMICG00000036748	-	100	71.444	Microcebus_murinus
ENSPREG00000023139	eif3c	100	88.079	ENSMMOG00000001572	eif3c	100	87.963	Mola_mola
ENSPREG00000023139	eif3c	89	83.444	ENSMODG00000015579	-	100	71.772	Monodelphis_domestica
ENSPREG00000023139	eif3c	100	84.157	ENSMALG00000008907	eif3c	100	86.860	Monopterus_albus
ENSPREG00000023139	eif3c	100	71.491	MGP_CAROLIEiJ_G0030451	Eif3c	100	71.116	Mus_caroli
ENSPREG00000023139	eif3c	100	71.600	ENSMUSG00000030738	Eif3c	100	71.116	Mus_musculus
ENSPREG00000023139	eif3c	100	71.491	MGP_SPRETEiJ_G0031565	Eif3c	100	71.116	Mus_spretus
ENSPREG00000023139	eif3c	70	83.582	ENSMLUG00000015558	-	100	71.663	Myotis_lucifugus
ENSPREG00000023139	eif3c	86	56.601	ENSNGAG00000010901	-	98	61.818	Nannospalax_galili
ENSPREG00000023139	eif3c	100	66.704	ENSNLEG00000001425	-	100	68.218	Nomascus_leucogenys
ENSPREG00000023139	eif3c	93	47.441	ENSMEUG00000005317	-	100	46.883	Notamacropus_eugenii
ENSPREG00000023139	eif3c	70	72.277	ENSONIG00000011434	eif3c	99	72.277	Oreochromis_niloticus
ENSPREG00000023139	eif3c	88	96.875	ENSORLG00000006318	eif3c	99	87.089	Oryzias_latipes
ENSPREG00000023139	eif3c	88	96.875	ENSORLG00020015713	eif3c	100	84.211	Oryzias_latipes_hni
ENSPREG00000023139	eif3c	89	97.500	ENSOMEG00000020450	eif3c	100	81.838	Oryzias_melastigma
ENSPREG00000023139	eif3c	70	83.416	ENSOGAG00000012737	-	75	76.135	Otolemur_garnettii
ENSPREG00000023139	eif3c	100	80.214	ENSPKIG00000002049	eif3c	100	79.764	Paramormyrops_kingsleyae
ENSPREG00000023139	eif3c	70	97.338	ENSPMGG00000005409	eif3c	100	85.330	Periophthalmus_magnuspinnatus
ENSPREG00000023139	eif3c	70	83.085	ENSPEMG00000010899	Eif3c	100	71.177	Peromyscus_maniculatus_bairdii
ENSPREG00000023139	eif3c	100	98.366	ENSPLAG00000017480	eif3c	100	98.366	Poecilia_latipinna
ENSPREG00000023139	eif3c	100	94.925	ENSPMEG00000019512	eif3c	100	94.925	Poecilia_mexicana
ENSPREG00000023139	eif3c	70	83.555	ENSPCAG00000012710	-	100	83.555	Procavia_capensis
ENSPREG00000023139	eif3c	100	72.277	ENSPCOG00000019289	-	100	71.444	Propithecus_coquereli
ENSPREG00000023139	eif3c	63	77.564	ENSPNYG00000016530	eif3c	99	77.564	Pundamilia_nyererei
ENSPREG00000023139	eif3c	100	80.666	ENSPNAG00000024040	eif3c	100	80.541	Pygocentrus_nattereri
ENSPREG00000023139	eif3c	94	83.475	ENSRBIG00000044009	-	98	71.014	Rhinopithecus_bieti
ENSPREG00000023139	eif3c	96	83.582	ENSRROG00000043626	-	100	71.335	Rhinopithecus_roxellana
ENSPREG00000023139	eif3c	75	31.183	YMR309C	-	66	31.183	Saccharomyces_cerevisiae
ENSPREG00000023139	eif3c	70	83.582	ENSSBOG00000032155	-	100	71.694	Saimiri_boliviensis_boliviensis
ENSPREG00000023139	eif3c	85	83.168	ENSSHAG00000011808	-	97	75.948	Sarcophilus_harrisii
ENSPREG00000023139	eif3c	100	80.628	ENSSFOG00015021823	eif3c	100	80.586	Scleropages_formosus
ENSPREG00000023139	eif3c	100	89.041	ENSSDUG00000023117	eif3c	100	89.450	Seriola_dumerili
ENSPREG00000023139	eif3c	70	97.005	ENSSLDG00000009706	eif3c	100	88.228	Seriola_lalandi_dorsalis
ENSPREG00000023139	eif3c	100	75.142	ENSSPUG00000016470	-	99	76.229	Sphenodon_punctatus
ENSPREG00000023139	eif3c	94	93.750	ENSTNIG00000015210	eif3c	100	81.918	Tetraodon_nigroviridis
ENSPREG00000023139	eif3c	93	83.582	ENSTTRG00000005880	-	100	71.882	Tursiops_truncatus
ENSPREG00000023139	eif3c	70	83.914	ENSUAMG00000001127	-	91	92.357	Ursus_americanus
ENSPREG00000023139	eif3c	96	82.363	ENSVVUG00000025970	-	100	70.697	Vulpes_vulpes
ENSPREG00000023139	eif3c	72	83.067	ENSXETG00000002941	eif3c	100	74.267	Xenopus_tropicalis
ENSPREG00000023139	eif3c	100	86.566	ENSXMAG00000013796	eif3c	100	85.153	Xiphophorus_maculatus