EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000023179 (Gene tree)
Gene ID: 103462488
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 7551 bases
Position: chrLG3:18592452-18600002
Accession: 103462488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000034229	tRNA_anti-codon	PF01336.25	6.4e-13	1	1
ENSPREP00000034233	tRNA_anti-codon	PF01336.25	7.2e-13	1	1
ENSPREP00000034229	tRNA-synt_2	PF00152.20	2.8e-78	1	1
ENSPREP00000034233	tRNA-synt_2	PF00152.20	3.3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000034610	-	1734	XM_008405325	ENSPREP00000034229	577 (aa)	XP_008403547	UPI0004A44A20
ENSPRET00000034614	-	1858	XM_008405323	ENSPREP00000034233	609 (aa)	XP_008403545	UPI0004A3B8AE

Gene Model

Click here to download ENSPREG00000023179's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000023179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000023179	kars	99	79.002	ENSG00000065427	KARS	100	88.235	Homo_sapiens
ENSPREG00000023179	kars	99	89.474	ENSAPOG00000010997	kars	99	89.474	Acanthochromis_polyacanthus
ENSPREG00000023179	kars	99	77.568	ENSAMEG00000005347	KARS	93	77.568	Ailuropoda_melanoleuca
ENSPREG00000023179	kars	99	87.153	ENSACIG00000000304	kars	99	86.979	Amphilophus_citrinellus
ENSPREG00000023179	kars	97	91.297	ENSAOCG00000012971	kars	98	91.017	Amphiprion_ocellaris
ENSPREG00000023179	kars	99	90.988	ENSAPEG00000011144	kars	99	90.988	Amphiprion_percula
ENSPREG00000023179	kars	99	88.215	ENSATEG00000004954	kars	99	88.042	Anabas_testudineus
ENSPREG00000023179	kars	93	80.112	ENSAPLG00000012705	KARS	97	80.561	Anas_platyrhynchos
ENSPREG00000023179	kars	98	77.408	ENSACAG00000007577	KARS	90	77.758	Anolis_carolinensis
ENSPREG00000023179	kars	97	66.375	ENSANAG00000031739	-	94	65.559	Aotus_nancymaae
ENSPREG00000023179	kars	99	79.346	ENSANAG00000030403	-	97	79.346	Aotus_nancymaae
ENSPREG00000023179	kars	99	92.188	ENSACLG00000001613	kars	99	91.612	Astatotilapia_calliptera
ENSPREG00000023179	kars	99	88.215	ENSAMXG00000030719	kars	99	88.215	Astyanax_mexicanus
ENSPREG00000023179	kars	99	79.110	ENSBTAG00000015677	KARS	75	79.110	Bos_taurus
ENSPREG00000023179	kars	97	61.111	WBGene00002238	kars-1	97	63.600	Caenorhabditis_elegans
ENSPREG00000023179	kars	99	79.795	ENSCJAG00000014213	KARS	98	79.795	Callithrix_jacchus
ENSPREG00000023179	kars	99	78.425	ENSCAFG00000020069	KARS	93	78.425	Canis_familiaris
ENSPREG00000023179	kars	99	79.652	ENSCAFG00020001721	KARS	96	79.652	Canis_lupus_dingo
ENSPREG00000023179	kars	96	78.929	ENSCHIG00000016073	-	93	78.929	Capra_hircus
ENSPREG00000023179	kars	99	79.553	ENSCHIG00000014108	-	98	79.553	Capra_hircus
ENSPREG00000023179	kars	98	80.911	ENSTSYG00000001643	KARS	97	80.995	Carlito_syrichta
ENSPREG00000023179	kars	98	73.427	ENSCAPG00000016234	KARS	96	73.509	Cavia_aperea
ENSPREG00000023179	kars	99	79.452	ENSCPOG00000012036	KARS	98	79.452	Cavia_porcellus
ENSPREG00000023179	kars	93	65.018	ENSCCAG00000030337	-	99	65.018	Cebus_capucinus
ENSPREG00000023179	kars	99	79.690	ENSCCAG00000034307	-	97	79.690	Cebus_capucinus
ENSPREG00000023179	kars	99	78.313	ENSCATG00000038129	KARS	97	78.299	Cercocebus_atys
ENSPREG00000023179	kars	99	78.448	ENSCLAG00000007905	KARS	97	78.621	Chinchilla_lanigera
ENSPREG00000023179	kars	98	77.913	ENSCSAG00000003664	KARS	92	77.913	Chlorocebus_sabaeus
ENSPREG00000023179	kars	79	84.683	ENSCHOG00000013447	KARS	73	84.683	Choloepus_hoffmanni
ENSPREG00000023179	kars	90	72.447	ENSCPBG00000002553	-	94	72.447	Chrysemys_picta_bellii
ENSPREG00000023179	kars	98	80.769	ENSCPBG00000026969	KARS	97	80.420	Chrysemys_picta_bellii
ENSPREG00000023179	kars	99	67.071	ENSCING00000009513	-	100	67.071	Ciona_intestinalis
ENSPREG00000023179	kars	55	72.188	ENSCSAVG00000001136	-	100	72.797	Ciona_savignyi
ENSPREG00000023179	kars	98	69.081	ENSCSAVG00000007684	-	98	69.081	Ciona_savignyi
ENSPREG00000023179	kars	99	74.871	ENSCANG00000032813	KARS	97	74.871	Colobus_angolensis_palliatus
ENSPREG00000023179	kars	99	80.138	ENSCGRG00001004055	KARS	97	80.138	Cricetulus_griseus_chok1gshd
ENSPREG00000023179	kars	99	80.138	ENSCGRG00000014242	KARS	97	80.138	Cricetulus_griseus_crigri
ENSPREG00000023179	kars	99	91.289	ENSCSEG00000008324	kars	99	91.289	Cynoglossus_semilaevis
ENSPREG00000023179	kars	99	94.903	ENSCVAG00000019686	kars	99	94.903	Cyprinodon_variegatus
ENSPREG00000023179	kars	99	86.979	ENSDARG00000103799	kars	99	89.689	Danio_rerio
ENSPREG00000023179	kars	97	79.577	ENSDNOG00000002241	KARS	91	79.754	Dasypus_novemcinctus
ENSPREG00000023179	kars	99	78.793	ENSDORG00000004780	-	97	78.793	Dipodomys_ordii
ENSPREG00000023179	kars	96	62.523	ENSDORG00000024214	-	96	62.523	Dipodomys_ordii
ENSPREG00000023179	kars	98	71.076	FBgn0027084	LysRS	98	70.723	Drosophila_melanogaster
ENSPREG00000023179	kars	97	80.247	ENSETEG00000008353	KARS	92	79.585	Echinops_telfairi
ENSPREG00000023179	kars	99	70.588	ENSEBUG00000001284	-	99	70.588	Eptatretus_burgeri
ENSPREG00000023179	kars	97	81.239	ENSEASG00005013497	KARS	95	81.239	Equus_asinus_asinus
ENSPREG00000023179	kars	97	81.239	ENSECAG00000013424	KARS	95	81.239	Equus_caballus
ENSPREG00000023179	kars	99	72.964	ENSEEUG00000007042	KARS	94	72.260	Erinaceus_europaeus
ENSPREG00000023179	kars	97	80.995	ENSELUG00000014575	kars	96	80.817	Esox_lucius
ENSPREG00000023179	kars	99	79.514	ENSFCAG00000008573	KARS	97	79.038	Felis_catus
ENSPREG00000023179	kars	99	77.721	ENSFALG00000002543	KARS	99	77.721	Ficedula_albicollis
ENSPREG00000023179	kars	99	78.793	ENSFDAG00000007155	KARS	97	78.793	Fukomys_damarensis
ENSPREG00000023179	kars	100	93.241	ENSFHEG00000006172	kars	100	93.241	Fundulus_heteroclitus
ENSPREG00000023179	kars	98	86.949	ENSGMOG00000002633	kars	99	84.967	Gadus_morhua
ENSPREG00000023179	kars	99	79.275	ENSGALG00000000907	KARS	99	79.965	Gallus_gallus
ENSPREG00000023179	kars	100	97.373	ENSGAFG00000017252	kars	100	97.373	Gambusia_affinis
ENSPREG00000023179	kars	99	88.793	ENSGACG00000015749	kars	99	87.908	Gasterosteus_aculeatus
ENSPREG00000023179	kars	98	81.119	ENSGAGG00000023836	KARS	96	80.769	Gopherus_agassizii
ENSPREG00000023179	kars	90	72.062	ENSGAGG00000011960	-	97	72.515	Gopherus_agassizii
ENSPREG00000023179	kars	99	78.830	ENSGGOG00000005515	KARS	97	78.830	Gorilla_gorilla
ENSPREG00000023179	kars	99	92.188	ENSHBUG00000013619	kars	99	91.612	Haplochromis_burtoni
ENSPREG00000023179	kars	99	64.676	ENSHGLG00000001298	-	97	64.505	Heterocephalus_glaber_female
ENSPREG00000023179	kars	99	71.034	ENSHGLG00000015235	-	97	71.034	Heterocephalus_glaber_female
ENSPREG00000023179	kars	99	79.138	ENSHGLG00000011898	KARS	98	79.718	Heterocephalus_glaber_female
ENSPREG00000023179	kars	99	79.138	ENSHGLG00100012264	KARS	97	79.138	Heterocephalus_glaber_male
ENSPREG00000023179	kars	99	70.862	ENSHGLG00100012523	-	91	77.479	Heterocephalus_glaber_male
ENSPREG00000023179	kars	99	64.505	ENSHGLG00100006466	-	97	64.334	Heterocephalus_glaber_male
ENSPREG00000023179	kars	99	89.601	ENSHCOG00000002900	kars	96	89.601	Hippocampus_comes
ENSPREG00000023179	kars	99	89.410	ENSIPUG00000009862	kars	99	89.236	Ictalurus_punctatus
ENSPREG00000023179	kars	99	79.203	ENSSTOG00000004205	KARS	97	79.203	Ictidomys_tridecemlineatus
ENSPREG00000023179	kars	99	79.130	ENSJJAG00000020406	Kars	97	79.478	Jaculus_jaculus
ENSPREG00000023179	kars	100	91.176	ENSKMAG00000006434	kars	100	91.176	Kryptolebias_marmoratus
ENSPREG00000023179	kars	99	91.161	ENSLBEG00000026537	kars	99	89.655	Labrus_bergylta
ENSPREG00000023179	kars	88	75.296	ENSLACG00000016399	-	99	75.296	Latimeria_chalumnae
ENSPREG00000023179	kars	98	81.228	ENSLACG00000006667	KARS	93	80.870	Latimeria_chalumnae
ENSPREG00000023179	kars	94	68.508	ENSLOCG00000013608	-	99	68.508	Lepisosteus_oculatus
ENSPREG00000023179	kars	99	86.678	ENSLOCG00000004002	kars	99	86.678	Lepisosteus_oculatus
ENSPREG00000023179	kars	99	77.990	ENSLAFG00000015340	KARS	92	78.596	Loxodonta_africana
ENSPREG00000023179	kars	99	78.141	ENSMFAG00000040024	KARS	97	78.141	Macaca_fascicularis
ENSPREG00000023179	kars	87	76.424	ENSMNEG00000035832	-	98	76.424	Macaca_nemestrina
ENSPREG00000023179	kars	99	78.141	ENSMNEG00000042879	-	97	78.141	Macaca_nemestrina
ENSPREG00000023179	kars	99	78.141	ENSMLEG00000034947	KARS	97	78.141	Mandrillus_leucophaeus
ENSPREG00000023179	kars	98	90.957	ENSMAMG00000021559	kars	99	89.819	Mastacembelus_armatus
ENSPREG00000023179	kars	99	92.188	ENSMZEG00005014382	kars	99	91.612	Maylandia_zebra
ENSPREG00000023179	kars	95	80.036	ENSMGAG00000009000	KARS	98	79.496	Meleagris_gallopavo
ENSPREG00000023179	kars	99	80.412	ENSMICG00000011997	KARS	97	80.345	Microcebus_murinus
ENSPREG00000023179	kars	99	76.857	ENSMOCG00000019029	-	97	76.857	Microtus_ochrogaster
ENSPREG00000023179	kars	99	79.793	ENSMOCG00000011829	Kars	97	79.793	Microtus_ochrogaster
ENSPREG00000023179	kars	97	90.018	ENSMMOG00000016934	kars	99	90.018	Mola_mola
ENSPREG00000023179	kars	96	78.036	ENSMODG00000002215	-	97	78.214	Monodelphis_domestica
ENSPREG00000023179	kars	99	73.391	ENSMODG00000002238	-	85	79.151	Monodelphis_domestica
ENSPREG00000023179	kars	99	89.428	ENSMALG00000020858	kars	100	88.567	Monopterus_albus
ENSPREG00000023179	kars	85	79.630	MGP_CAROLIEiJ_G0031588	Kars	97	81.199	Mus_caroli
ENSPREG00000023179	kars	99	80.829	ENSMUSG00000031948	Kars	97	80.829	Mus_musculus
ENSPREG00000023179	kars	99	80.484	MGP_PahariEiJ_G0023186	Kars	97	80.484	Mus_pahari
ENSPREG00000023179	kars	99	80.656	MGP_SPRETEiJ_G0032706	Kars	97	80.656	Mus_spretus
ENSPREG00000023179	kars	99	77.949	ENSMPUG00000009871	KARS	94	77.949	Mustela_putorius_furo
ENSPREG00000023179	kars	80	52.770	ENSMLUG00000026871	-	76	52.770	Myotis_lucifugus
ENSPREG00000023179	kars	98	80.492	ENSMLUG00000015119	-	95	79.965	Myotis_lucifugus
ENSPREG00000023179	kars	95	79.496	ENSNGAG00000022944	-	95	79.496	Nannospalax_galili
ENSPREG00000023179	kars	99	79.931	ENSNGAG00000018820	-	97	79.931	Nannospalax_galili
ENSPREG00000023179	kars	99	92.014	ENSNBRG00000011098	kars	98	91.840	Neolamprologus_brichardi
ENSPREG00000023179	kars	99	79.174	ENSNLEG00000013072	KARS	97	79.174	Nomascus_leucogenys
ENSPREG00000023179	kars	97	76.744	ENSMEUG00000008684	KARS	85	80.502	Notamacropus_eugenii
ENSPREG00000023179	kars	97	79.541	ENSOPRG00000012544	KARS	93	79.718	Ochotona_princeps
ENSPREG00000023179	kars	98	56.890	ENSODEG00000009464	-	99	56.714	Octodon_degus
ENSPREG00000023179	kars	99	79.310	ENSODEG00000013099	-	98	79.505	Octodon_degus
ENSPREG00000023179	kars	99	91.840	ENSONIG00000005937	kars	99	91.667	Oreochromis_niloticus
ENSPREG00000023179	kars	97	80.742	ENSOANG00000008179	KARS	88	83.142	Ornithorhynchus_anatinus
ENSPREG00000023179	kars	99	73.276	ENSOCUG00000015553	KARS	97	73.448	Oryctolagus_cuniculus
ENSPREG00000023179	kars	100	87.377	ENSORLG00000007627	kars	99	87.377	Oryzias_latipes
ENSPREG00000023179	kars	100	87.541	ENSORLG00020010056	kars	99	87.541	Oryzias_latipes_hni
ENSPREG00000023179	kars	100	87.541	ENSORLG00015008179	kars	99	87.541	Oryzias_latipes_hsok
ENSPREG00000023179	kars	100	89.965	ENSOMEG00000001710	kars	99	89.965	Oryzias_melastigma
ENSPREG00000023179	kars	99	73.801	ENSOGAG00000005903	KARS	93	73.801	Otolemur_garnettii
ENSPREG00000023179	kars	93	79.015	ENSOARG00000006928	KARS	96	79.015	Ovis_aries
ENSPREG00000023179	kars	99	78.657	ENSPPAG00000036192	KARS	97	78.657	Pan_paniscus
ENSPREG00000023179	kars	99	79.688	ENSPPRG00000003027	KARS	97	79.174	Panthera_pardus
ENSPREG00000023179	kars	99	79.514	ENSPTIG00000008011	KARS	97	79.002	Panthera_tigris_altaica
ENSPREG00000023179	kars	99	78.830	ENSPTRG00000008364	KARS	97	78.830	Pan_troglodytes
ENSPREG00000023179	kars	99	78.313	ENSPANG00000024106	KARS	91	78.697	Papio_anubis
ENSPREG00000023179	kars	99	87.197	ENSPKIG00000009896	kars	99	87.197	Paramormyrops_kingsleyae
ENSPREG00000023179	kars	90	72.989	ENSPSIG00000003041	-	94	73.930	Pelodiscus_sinensis
ENSPREG00000023179	kars	97	80.357	ENSPSIG00000009294	KARS	96	80.357	Pelodiscus_sinensis
ENSPREG00000023179	kars	97	92.143	ENSPMGG00000006117	kars	94	94.455	Periophthalmus_magnuspinnatus
ENSPREG00000023179	kars	99	80.000	ENSPEMG00000012277	Kars	97	80.000	Peromyscus_maniculatus_bairdii
ENSPREG00000023179	kars	97	73.535	ENSPMAG00000008360	-	91	73.712	Petromyzon_marinus
ENSPREG00000023179	kars	97	76.840	ENSPCIG00000025469	-	84	80.620	Phascolarctos_cinereus
ENSPREG00000023179	kars	99	79.130	ENSPCIG00000010761	-	97	79.130	Phascolarctos_cinereus
ENSPREG00000023179	kars	100	98.194	ENSPFOG00000013253	kars	100	98.194	Poecilia_formosa
ENSPREG00000023179	kars	100	98.522	ENSPLAG00000004189	kars	100	98.522	Poecilia_latipinna
ENSPREG00000023179	kars	100	98.194	ENSPMEG00000015698	kars	100	98.194	Poecilia_mexicana
ENSPREG00000023179	kars	97	78.873	ENSPPYG00000007567	KARS	91	79.049	Pongo_abelii
ENSPREG00000023179	kars	89	74.854	ENSPCAG00000010790	KARS	98	74.854	Procavia_capensis
ENSPREG00000023179	kars	98	73.944	ENSPCOG00000003166	KARS	88	82.947	Propithecus_coquereli
ENSPREG00000023179	kars	97	80.282	ENSPVAG00000006746	KARS	97	76.393	Pteropus_vampyrus
ENSPREG00000023179	kars	99	92.188	ENSPNYG00000013095	kars	99	91.612	Pundamilia_nyererei
ENSPREG00000023179	kars	99	88.215	ENSPNAG00000013828	kars	99	88.215	Pygocentrus_nattereri
ENSPREG00000023179	kars	97	79.789	ENSRNOG00000019456	Kars	91	79.965	Rattus_norvegicus
ENSPREG00000023179	kars	99	77.969	ENSRBIG00000030118	KARS	97	77.951	Rhinopithecus_bieti
ENSPREG00000023179	kars	99	77.951	ENSRROG00000041418	KARS	97	77.951	Rhinopithecus_roxellana
ENSPREG00000023179	kars	78	34.526	YNL073W	-	82	34.526	Saccharomyces_cerevisiae
ENSPREG00000023179	kars	98	55.245	YDR037W	KRS1	89	57.714	Saccharomyces_cerevisiae
ENSPREG00000023179	kars	99	79.518	ENSSBOG00000019255	KARS	98	80.000	Saimiri_boliviensis_boliviensis
ENSPREG00000023179	kars	97	74.211	ENSSHAG00000001359	-	98	74.386	Sarcophilus_harrisii
ENSPREG00000023179	kars	97	65.836	ENSSHAG00000002050	-	87	67.351	Sarcophilus_harrisii
ENSPREG00000023179	kars	94	68.946	ENSSHAG00000009005	-	92	71.068	Sarcophilus_harrisii
ENSPREG00000023179	kars	96	89.048	ENSSFOG00015014837	kars	94	91.379	Scleropages_formosus
ENSPREG00000023179	kars	99	90.815	ENSSMAG00000021441	kars	99	90.815	Scophthalmus_maximus
ENSPREG00000023179	kars	99	92.028	ENSSDUG00000001202	kars	99	92.028	Seriola_dumerili
ENSPREG00000023179	kars	97	91.652	ENSSLDG00000021220	kars	98	91.829	Seriola_lalandi_dorsalis
ENSPREG00000023179	kars	76	83.929	ENSSARG00000011493	KARS	77	83.929	Sorex_araneus
ENSPREG00000023179	kars	65	65.147	ENSSPUG00000000449	-	83	67.887	Sphenodon_punctatus
ENSPREG00000023179	kars	99	78.767	ENSSPUG00000004974	KARS	98	78.596	Sphenodon_punctatus
ENSPREG00000023179	kars	99	91.297	ENSSPAG00000020365	kars	97	91.993	Stegastes_partitus
ENSPREG00000023179	kars	99	79.210	ENSSSCG00000002704	KARS	97	79.038	Sus_scrofa
ENSPREG00000023179	kars	97	79.821	ENSTGUG00000008400	KARS	100	79.821	Taeniopygia_guttata
ENSPREG00000023179	kars	98	85.968	ENSTRUG00000017551	kars	99	83.553	Takifugu_rubripes
ENSPREG00000023179	kars	90	89.847	ENSTNIG00000009351	kars	97	85.487	Tetraodon_nigroviridis
ENSPREG00000023179	kars	97	61.837	ENSTBEG00000004610	KARS	79	70.678	Tupaia_belangeri
ENSPREG00000023179	kars	97	79.292	ENSTTRG00000001221	KARS	90	79.646	Tursiops_truncatus
ENSPREG00000023179	kars	98	79.094	ENSUAMG00000017557	KARS	96	79.094	Ursus_americanus
ENSPREG00000023179	kars	99	77.740	ENSUMAG00000014559	KARS	93	77.740	Ursus_maritimus
ENSPREG00000023179	kars	99	76.239	ENSVPAG00000003716	KARS	94	76.239	Vicugna_pacos
ENSPREG00000023179	kars	99	79.304	ENSVVUG00000024338	KARS	97	78.883	Vulpes_vulpes
ENSPREG00000023179	kars	100	78.767	ENSXETG00000003569	kars	99	78.596	Xenopus_tropicalis
ENSPREG00000023179	kars	97	97.674	ENSXCOG00000011313	kars	100	97.674	Xiphophorus_couchianus
ENSPREG00000023179	kars	100	97.574	ENSXMAG00000003191	kars	100	97.574	Xiphophorus_maculatus