EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000000590 (Gene tree)
Gene ID: 102453858
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrJH212172.1:3911047-3911418
Accession: 102453858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000000590	LSM	PF01423.22	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000000590	LSM10-201	372	XM_006134259	ENSPSIP00000000590	123 (aa)	XP_006134321	K7EXT0

Gene Model

Click here to download ENSPSIG00000000590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000000590's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000000590	LSM10	56	31.429	ENSPSIG00000012358	LSM4	51	31.429
ENSPSIG00000000590	LSM10	57	31.507	ENSPSIG00000004458	LSM2	61	31.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000000590	LSM10	100	70.732	ENSG00000181817	LSM10	100	70.732	Homo_sapiens
ENSPSIG00000000590	LSM10	100	72.358	ENSAMEG00000019854	LSM10	100	72.358	Ailuropoda_melanoleuca
ENSPSIG00000000590	LSM10	92	66.372	ENSACIG00000015420	oscp1a	75	66.372	Amphilophus_citrinellus
ENSPSIG00000000590	LSM10	92	65.487	ENSAOCG00000014654	-	93	65.487	Amphiprion_ocellaris
ENSPSIG00000000590	LSM10	92	65.487	ENSAOCG00000015618	LSM10	93	65.487	Amphiprion_ocellaris
ENSPSIG00000000590	LSM10	96	59.322	ENSAOCG00000015607	LSM10	91	59.322	Amphiprion_ocellaris
ENSPSIG00000000590	LSM10	96	59.322	ENSAPEG00000021851	LSM10	91	59.322	Amphiprion_percula
ENSPSIG00000000590	LSM10	92	65.487	ENSAPEG00000021845	-	93	65.487	Amphiprion_percula
ENSPSIG00000000590	LSM10	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSPSIG00000000590	LSM10	100	74.797	ENSACAG00000001231	LSM10	100	74.797	Anolis_carolinensis
ENSPSIG00000000590	LSM10	100	71.545	ENSANAG00000018759	-	100	71.545	Aotus_nancymaae
ENSPSIG00000000590	LSM10	97	71.429	ENSANAG00000031489	-	98	71.429	Aotus_nancymaae
ENSPSIG00000000590	LSM10	94	62.931	ENSACLG00000004728	oscp1a	94	62.931	Astatotilapia_calliptera
ENSPSIG00000000590	LSM10	96	66.949	ENSAMXG00000025301	oscp1a	98	66.949	Astyanax_mexicanus
ENSPSIG00000000590	LSM10	97	73.950	ENSBTAG00000024096	LSM10	98	73.950	Bos_taurus
ENSPSIG00000000590	LSM10	100	70.732	ENSCJAG00000044880	LSM10	100	70.732	Callithrix_jacchus
ENSPSIG00000000590	LSM10	100	72.358	ENSCAFG00000003382	LSM10	100	72.358	Canis_familiaris
ENSPSIG00000000590	LSM10	100	72.358	ENSCAFG00020008920	LSM10	100	72.358	Canis_lupus_dingo
ENSPSIG00000000590	LSM10	97	73.950	ENSCHIG00000009398	LSM10	98	73.950	Capra_hircus
ENSPSIG00000000590	LSM10	100	71.545	ENSCAPG00000012567	LSM10	100	71.545	Cavia_aperea
ENSPSIG00000000590	LSM10	100	71.545	ENSCPOG00000039302	LSM10	100	71.545	Cavia_porcellus
ENSPSIG00000000590	LSM10	100	71.545	ENSCCAG00000018913	-	100	71.545	Cebus_capucinus
ENSPSIG00000000590	LSM10	97	70.588	ENSCCAG00000008378	-	97	70.588	Cebus_capucinus
ENSPSIG00000000590	LSM10	100	71.545	ENSCATG00000006589	LSM10	100	71.545	Cercocebus_atys
ENSPSIG00000000590	LSM10	100	73.171	ENSCLAG00000008633	LSM10	100	73.171	Chinchilla_lanigera
ENSPSIG00000000590	LSM10	100	71.545	ENSCSAG00000000134	LSM10	100	71.545	Chlorocebus_sabaeus
ENSPSIG00000000590	LSM10	100	70.400	ENSCHOG00000008615	LSM10	100	70.400	Choloepus_hoffmanni
ENSPSIG00000000590	LSM10	78	32.292	ENSCSAVG00000001896	-	82	32.292	Ciona_savignyi
ENSPSIG00000000590	LSM10	100	71.545	ENSCANG00000019928	LSM10	100	71.545	Colobus_angolensis_palliatus
ENSPSIG00000000590	LSM10	98	74.380	ENSCGRG00001004317	-	99	74.380	Cricetulus_griseus_chok1gshd
ENSPSIG00000000590	LSM10	93	65.812	ENSCGRG00001022673	-	94	65.812	Cricetulus_griseus_chok1gshd
ENSPSIG00000000590	LSM10	93	65.812	ENSCGRG00000015514	-	94	65.812	Cricetulus_griseus_crigri
ENSPSIG00000000590	LSM10	98	74.380	ENSCGRG00000014935	-	99	74.380	Cricetulus_griseus_crigri
ENSPSIG00000000590	LSM10	93	61.739	ENSCSEG00000010374	oscp1a	77	61.739	Cynoglossus_semilaevis
ENSPSIG00000000590	LSM10	93	62.609	ENSCVAG00000001536	oscp1a	87	62.609	Cyprinodon_variegatus
ENSPSIG00000000590	LSM10	69	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSPSIG00000000590	LSM10	98	67.769	ENSDARG00000101222	oscp1a	100	67.769	Danio_rerio
ENSPSIG00000000590	LSM10	99	73.770	ENSDNOG00000036662	LSM10	99	73.770	Dasypus_novemcinctus
ENSPSIG00000000590	LSM10	100	72.358	ENSDORG00000007579	Lsm10	100	72.358	Dipodomys_ordii
ENSPSIG00000000590	LSM10	100	72.358	ENSETEG00000005703	LSM10	100	72.358	Echinops_telfairi
ENSPSIG00000000590	LSM10	94	49.138	ENSEBUG00000001312	oscp1a	95	49.138	Eptatretus_burgeri
ENSPSIG00000000590	LSM10	100	73.171	ENSEASG00005012194	LSM10	100	73.171	Equus_asinus_asinus
ENSPSIG00000000590	LSM10	100	73.171	ENSECAG00000005071	LSM10	100	73.171	Equus_caballus
ENSPSIG00000000590	LSM10	100	72.358	ENSEEUG00000012032	LSM10	100	72.358	Erinaceus_europaeus
ENSPSIG00000000590	LSM10	98	66.116	ENSELUG00000007452	oscp1a	99	66.116	Esox_lucius
ENSPSIG00000000590	LSM10	100	80.488	ENSFALG00000000851	LSM10	100	80.488	Ficedula_albicollis
ENSPSIG00000000590	LSM10	100	73.171	ENSFDAG00000021056	LSM10	100	73.171	Fukomys_damarensis
ENSPSIG00000000590	LSM10	89	66.364	ENSFHEG00000001058	oscp1a	95	66.364	Fundulus_heteroclitus
ENSPSIG00000000590	LSM10	93	65.217	ENSGMOG00000019832	oscp1a	96	65.217	Gadus_morhua
ENSPSIG00000000590	LSM10	100	83.740	ENSGALG00000002127	LSM10	100	83.740	Gallus_gallus
ENSPSIG00000000590	LSM10	94	57.983	ENSGAFG00000016445	oscp1a	95	57.983	Gambusia_affinis
ENSPSIG00000000590	LSM10	95	60.684	ENSGACG00000002329	oscp1a	96	60.684	Gasterosteus_aculeatus
ENSPSIG00000000590	LSM10	100	95.122	ENSGAGG00000024848	LSM10	100	95.122	Gopherus_agassizii
ENSPSIG00000000590	LSM10	100	70.732	ENSGGOG00000003556	LSM10	100	70.732	Gorilla_gorilla
ENSPSIG00000000590	LSM10	94	62.931	ENSHBUG00000001722	oscp1a	94	62.931	Haplochromis_burtoni
ENSPSIG00000000590	LSM10	100	71.545	ENSHGLG00000011625	LSM10	100	71.545	Heterocephalus_glaber_female
ENSPSIG00000000590	LSM10	100	71.545	ENSHGLG00100001769	LSM10	100	71.545	Heterocephalus_glaber_male
ENSPSIG00000000590	LSM10	85	66.667	ENSIPUG00000005808	oscp1a	91	66.667	Ictalurus_punctatus
ENSPSIG00000000590	LSM10	100	72.358	ENSSTOG00000000606	LSM10	100	72.358	Ictidomys_tridecemlineatus
ENSPSIG00000000590	LSM10	94	64.655	ENSKMAG00000012143	oscp1a	96	64.655	Kryptolebias_marmoratus
ENSPSIG00000000590	LSM10	97	62.185	ENSLBEG00000017764	oscp1a	98	62.185	Labrus_bergylta
ENSPSIG00000000590	LSM10	100	69.919	ENSLACG00000015904	LSM10	95	69.919	Latimeria_chalumnae
ENSPSIG00000000590	LSM10	95	67.521	ENSLOCG00000018277	oscp1a	96	67.521	Lepisosteus_oculatus
ENSPSIG00000000590	LSM10	100	72.358	ENSLAFG00000009600	LSM10	100	72.358	Loxodonta_africana
ENSPSIG00000000590	LSM10	100	71.545	ENSMFAG00000009115	LSM10	100	71.545	Macaca_fascicularis
ENSPSIG00000000590	LSM10	100	71.545	ENSMMUG00000017338	LSM10	100	71.545	Macaca_mulatta
ENSPSIG00000000590	LSM10	100	71.545	ENSMNEG00000020023	LSM10	100	71.545	Macaca_nemestrina
ENSPSIG00000000590	LSM10	100	71.545	ENSMLEG00000025150	LSM10	100	71.545	Mandrillus_leucophaeus
ENSPSIG00000000590	LSM10	96	63.559	ENSMAMG00000004427	oscp1a	97	63.559	Mastacembelus_armatus
ENSPSIG00000000590	LSM10	94	62.931	ENSMZEG00005026307	oscp1a	94	62.931	Maylandia_zebra
ENSPSIG00000000590	LSM10	100	81.301	ENSMGAG00000015707	LSM10	100	81.301	Meleagris_gallopavo
ENSPSIG00000000590	LSM10	98	72.727	ENSMAUG00000016624	Lsm10	99	72.727	Mesocricetus_auratus
ENSPSIG00000000590	LSM10	98	73.554	ENSMOCG00000021943	Lsm10	99	73.554	Microtus_ochrogaster
ENSPSIG00000000590	LSM10	98	61.983	ENSMMOG00000013597	oscp1a	90	61.983	Mola_mola
ENSPSIG00000000590	LSM10	100	77.236	ENSMODG00000023328	LSM10	100	77.236	Monodelphis_domestica
ENSPSIG00000000590	LSM10	52	64.062	ENSMALG00000012661	oscp1a	50	64.062	Monopterus_albus
ENSPSIG00000000590	LSM10	98	73.554	MGP_CAROLIEiJ_G0026467	Lsm10	100	78.495	Mus_caroli
ENSPSIG00000000590	LSM10	98	73.554	ENSMUSG00000050188	Lsm10	100	78.495	Mus_musculus
ENSPSIG00000000590	LSM10	98	73.554	MGP_PahariEiJ_G0028798	Lsm10	100	78.495	Mus_pahari
ENSPSIG00000000590	LSM10	98	73.554	MGP_SPRETEiJ_G0027446	Lsm10	100	78.495	Mus_spretus
ENSPSIG00000000590	LSM10	100	72.358	ENSMPUG00000018593	LSM10	100	72.358	Mustela_putorius_furo
ENSPSIG00000000590	LSM10	100	70.732	ENSMLUG00000023895	LSM10	100	70.732	Myotis_lucifugus
ENSPSIG00000000590	LSM10	100	70.732	ENSNGAG00000015011	Lsm10	100	70.732	Nannospalax_galili
ENSPSIG00000000590	LSM10	95	63.248	ENSNBRG00000014306	oscp1a	95	63.248	Neolamprologus_brichardi
ENSPSIG00000000590	LSM10	100	70.732	ENSNLEG00000033754	LSM10	100	70.732	Nomascus_leucogenys
ENSPSIG00000000590	LSM10	100	78.049	ENSMEUG00000006313	LSM10	100	78.049	Notamacropus_eugenii
ENSPSIG00000000590	LSM10	100	73.171	ENSOPRG00000001699	LSM10	100	73.171	Ochotona_princeps
ENSPSIG00000000590	LSM10	100	73.171	ENSODEG00000019161	LSM10	100	73.171	Octodon_degus
ENSPSIG00000000590	LSM10	96	63.559	ENSONIG00000020904	oscp1a	97	63.559	Oreochromis_niloticus
ENSPSIG00000000590	LSM10	100	73.171	ENSOANG00000002066	LSM10	100	73.171	Ornithorhynchus_anatinus
ENSPSIG00000000590	LSM10	100	73.171	ENSOCUG00000005333	LSM10	100	73.171	Oryctolagus_cuniculus
ENSPSIG00000000590	LSM10	97	64.706	ENSORLG00000009504	oscp1a	98	64.706	Oryzias_latipes
ENSPSIG00000000590	LSM10	97	64.706	ENSORLG00020016201	oscp1a	98	64.706	Oryzias_latipes_hni
ENSPSIG00000000590	LSM10	97	63.866	ENSORLG00015007794	oscp1a	98	63.866	Oryzias_latipes_hsok
ENSPSIG00000000590	LSM10	100	73.171	ENSOGAG00000002653	LSM10	100	73.171	Otolemur_garnettii
ENSPSIG00000000590	LSM10	97	73.950	ENSOARG00000009596	LSM10	98	73.950	Ovis_aries
ENSPSIG00000000590	LSM10	100	70.732	ENSPPAG00000023465	LSM10	100	70.732	Pan_paniscus
ENSPSIG00000000590	LSM10	100	73.171	ENSPPRG00000014619	LSM10	100	73.171	Panthera_pardus
ENSPSIG00000000590	LSM10	100	73.171	ENSPTIG00000004613	LSM10	100	73.171	Panthera_tigris_altaica
ENSPSIG00000000590	LSM10	100	70.732	ENSPTRG00000000539	LSM10	100	70.732	Pan_troglodytes
ENSPSIG00000000590	LSM10	100	71.545	ENSPANG00000023172	LSM10	100	71.545	Papio_anubis
ENSPSIG00000000590	LSM10	95	66.667	ENSPKIG00000003728	oscp1a	94	66.667	Paramormyrops_kingsleyae
ENSPSIG00000000590	LSM10	63	66.234	ENSPMGG00000015718	oscp1a	100	66.234	Periophthalmus_magnuspinnatus
ENSPSIG00000000590	LSM10	84	78.641	ENSPCIG00000014865	LSM10	76	78.641	Phascolarctos_cinereus
ENSPSIG00000000590	LSM10	91	66.071	ENSPFOG00000020490	oscp1a	95	66.071	Poecilia_formosa
ENSPSIG00000000590	LSM10	94	63.793	ENSPLAG00000016537	oscp1a	89	63.793	Poecilia_latipinna
ENSPSIG00000000590	LSM10	88	66.667	ENSPMEG00000000174	oscp1a	94	66.667	Poecilia_mexicana
ENSPSIG00000000590	LSM10	94	62.931	ENSPREG00000009899	oscp1a	89	62.931	Poecilia_reticulata
ENSPSIG00000000590	LSM10	100	70.732	ENSPPYG00000001539	LSM10	100	70.732	Pongo_abelii
ENSPSIG00000000590	LSM10	96	72.881	ENSPCAG00000002520	LSM10	97	72.881	Procavia_capensis
ENSPSIG00000000590	LSM10	100	71.545	ENSPVAG00000008644	LSM10	100	71.545	Pteropus_vampyrus
ENSPSIG00000000590	LSM10	94	62.931	ENSPNYG00000003138	oscp1a	94	62.931	Pundamilia_nyererei
ENSPSIG00000000590	LSM10	95	63.248	ENSPNAG00000028829	oscp1a	97	63.248	Pygocentrus_nattereri
ENSPSIG00000000590	LSM10	98	72.727	ENSRNOG00000025716	Lsm10	99	72.727	Rattus_norvegicus
ENSPSIG00000000590	LSM10	100	71.545	ENSRBIG00000001561	LSM10	100	71.545	Rhinopithecus_bieti
ENSPSIG00000000590	LSM10	100	71.545	ENSRROG00000011414	LSM10	100	71.545	Rhinopithecus_roxellana
ENSPSIG00000000590	LSM10	100	71.545	ENSSBOG00000036413	-	100	71.545	Saimiri_boliviensis_boliviensis
ENSPSIG00000000590	LSM10	100	78.862	ENSSHAG00000018056	LSM10	100	78.862	Sarcophilus_harrisii
ENSPSIG00000000590	LSM10	98	63.636	ENSSFOG00015019954	lsm10	99	63.636	Scleropages_formosus
ENSPSIG00000000590	LSM10	92	63.717	ENSSMAG00000001297	oscp1a	97	63.717	Scophthalmus_maximus
ENSPSIG00000000590	LSM10	96	61.345	ENSSDUG00000007090	oscp1a	97	61.345	Seriola_dumerili
ENSPSIG00000000590	LSM10	93	63.158	ENSSLDG00000000800	oscp1a	94	63.158	Seriola_lalandi_dorsalis
ENSPSIG00000000590	LSM10	100	73.600	ENSSARG00000004211	LSM10	100	74.400	Sorex_araneus
ENSPSIG00000000590	LSM10	93	63.158	ENSSPAG00000009229	oscp1a	94	63.158	Stegastes_partitus
ENSPSIG00000000590	LSM10	100	70.732	ENSSSCG00000038916	LSM10	100	70.732	Sus_scrofa
ENSPSIG00000000590	LSM10	99	81.148	ENSTGUG00000001600	-	100	81.148	Taeniopygia_guttata
ENSPSIG00000000590	LSM10	99	80.328	ENSTGUG00000001602	-	100	80.328	Taeniopygia_guttata
ENSPSIG00000000590	LSM10	98	61.157	ENSTRUG00000010531	oscp1a	98	61.157	Takifugu_rubripes
ENSPSIG00000000590	LSM10	100	70.732	ENSTBEG00000016674	LSM10	100	70.732	Tupaia_belangeri
ENSPSIG00000000590	LSM10	100	72.358	ENSUAMG00000020265	LSM10	100	72.358	Ursus_americanus
ENSPSIG00000000590	LSM10	100	72.358	ENSUMAG00000001438	LSM10	57	72.358	Ursus_maritimus
ENSPSIG00000000590	LSM10	100	72.358	ENSVVUG00000023209	LSM10	100	72.358	Vulpes_vulpes
ENSPSIG00000000590	LSM10	100	69.106	ENSXETG00000027631	lsm10	100	69.106	Xenopus_tropicalis
ENSPSIG00000000590	LSM10	99	58.915	ENSXCOG00000018776	oscp1a	81	58.915	Xiphophorus_couchianus
ENSPSIG00000000590	LSM10	88	66.667	ENSXMAG00000019963	oscp1a	86	66.667	Xiphophorus_maculatus