EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000000672 (Gene tree)
Gene ID: 112544169
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 870 bases
Position: chrJH206088.1:1904056-1904925
Accession: 112544169
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	1	7
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	2	7
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	3	7
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	4	7
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	5	7
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	6	7
ENSPSIP00000000671	zf-C2H2	PF00096.26	1.8e-40	7	7
ENSPSIP00000000671	zf-met	PF12874.7	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000000671	-	870	XM_006113343	ENSPSIP00000000671	289 (aa)	XP_006113405	K7EY11

Gene Model

Click here to download ENSPSIG00000000672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000000672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000000672	-	83	42.925	ENSPSIG00000004647	-	52	42.925
ENSPSIG00000000672	-	84	47.479	ENSPSIG00000009893	-	70	47.321
ENSPSIG00000000672	-	85	49.554	ENSPSIG00000009603	-	99	49.554
ENSPSIG00000000672	-	84	47.727	ENSPSIG00000005603	-	67	47.727
ENSPSIG00000000672	-	85	47.222	ENSPSIG00000015465	-	73	47.222
ENSPSIG00000000672	-	85	37.762	ENSPSIG00000011896	ZIC3	57	37.762
ENSPSIG00000000672	-	85	45.794	ENSPSIG00000000333	-	92	45.794
ENSPSIG00000000672	-	93	52.308	ENSPSIG00000004614	-	94	52.308
ENSPSIG00000000672	-	75	33.333	ENSPSIG00000011722	GTF3A	65	33.333
ENSPSIG00000000672	-	98	46.479	ENSPSIG00000000943	ZNF770	69	46.479
ENSPSIG00000000672	-	91	39.744	ENSPSIG00000004682	ZNF652	72	39.744
ENSPSIG00000000672	-	85	43.379	ENSPSIG00000000075	-	74	43.379
ENSPSIG00000000672	-	85	48.416	ENSPSIG00000010405	-	99	48.416
ENSPSIG00000000672	-	85	51.667	ENSPSIG00000010248	-	65	51.667
ENSPSIG00000000672	-	85	46.288	ENSPSIG00000010328	-	73	46.288
ENSPSIG00000000672	-	92	45.868	ENSPSIG00000012650	-	73	45.868
ENSPSIG00000000672	-	79	40.476	ENSPSIG00000016553	-	52	40.476
ENSPSIG00000000672	-	84	54.369	ENSPSIG00000006586	-	99	54.369
ENSPSIG00000000672	-	85	48.858	ENSPSIG00000009650	-	70	48.858
ENSPSIG00000000672	-	85	41.818	ENSPSIG00000013505	PRDM5	73	41.818
ENSPSIG00000000672	-	85	45.545	ENSPSIG00000001739	-	99	45.545
ENSPSIG00000000672	-	85	46.544	ENSPSIG00000015216	-	80	46.544
ENSPSIG00000000672	-	85	52.000	ENSPSIG00000003152	-	81	52.000
ENSPSIG00000000672	-	85	46.094	ENSPSIG00000001026	-	89	46.694
ENSPSIG00000000672	-	87	41.250	ENSPSIG00000004502	-	58	43.621
ENSPSIG00000000672	-	85	35.556	ENSPSIG00000016395	SNAI2	50	41.667
ENSPSIG00000000672	-	85	49.198	ENSPSIG00000000522	-	91	49.198
ENSPSIG00000000672	-	84	48.819	ENSPSIG00000008734	GFI1	58	48.819
ENSPSIG00000000672	-	84	52.632	ENSPSIG00000002569	-	77	52.632
ENSPSIG00000000672	-	85	41.704	ENSPSIG00000009270	-	74	41.704
ENSPSIG00000000672	-	84	51.000	ENSPSIG00000012112	GFI1B	51	51.000
ENSPSIG00000000672	-	83	38.889	ENSPSIG00000003607	SNAI1	62	38.889
ENSPSIG00000000672	-	95	44.813	ENSPSIG00000005128	-	100	45.415
ENSPSIG00000000672	-	85	48.347	ENSPSIG00000016380	-	69	48.347
ENSPSIG00000000672	-	88	30.932	ENSPSIG00000002538	ZNF521	66	30.932
ENSPSIG00000000672	-	87	40.964	ENSPSIG00000011562	-	85	40.476
ENSPSIG00000000672	-	87	43.969	ENSPSIG00000000760	-	94	42.435
ENSPSIG00000000672	-	94	48.571	ENSPSIG00000015459	-	74	48.571
ENSPSIG00000000672	-	85	46.250	ENSPSIG00000006790	-	94	46.250
ENSPSIG00000000672	-	92	36.981	ENSPSIG00000004303	ZNF319	94	36.981
ENSPSIG00000000672	-	97	42.259	ENSPSIG00000008588	-	100	44.262
ENSPSIG00000000672	-	94	31.073	ENSPSIG00000005522	ZNF646	99	34.940
ENSPSIG00000000672	-	85	43.056	ENSPSIG00000004262	SNAI3	57	43.056
ENSPSIG00000000672	-	85	46.606	ENSPSIG00000016247	-	64	46.606
ENSPSIG00000000672	-	92	47.059	ENSPSIG00000005672	-	64	47.059
ENSPSIG00000000672	-	92	50.228	ENSPSIG00000013021	-	75	50.228
ENSPSIG00000000672	-	85	58.824	ENSPSIG00000012865	-	69	58.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000000672	-	93	42.387	ENSACAG00000024956	-	77	42.387	Anolis_carolinensis
ENSPSIG00000000672	-	95	49.587	ENSACAG00000008664	-	66	49.587	Anolis_carolinensis
ENSPSIG00000000672	-	93	42.381	ENSACAG00000024898	-	98	44.811	Anolis_carolinensis
ENSPSIG00000000672	-	84	50.000	ENSAMXG00000036233	-	77	50.000	Astyanax_mexicanus
ENSPSIG00000000672	-	85	47.549	ENSAMXG00000038536	-	83	47.549	Astyanax_mexicanus
ENSPSIG00000000672	-	82	47.899	ENSAMXG00000038636	-	98	47.899	Astyanax_mexicanus
ENSPSIG00000000672	-	84	66.995	ENSAMXG00000035246	-	68	66.995	Astyanax_mexicanus
ENSPSIG00000000672	-	85	46.667	ENSAMXG00000034344	-	72	46.667	Astyanax_mexicanus
ENSPSIG00000000672	-	82	47.059	ENSAMXG00000025452	-	99	47.059	Astyanax_mexicanus
ENSPSIG00000000672	-	93	47.706	ENSAMXG00000010805	-	94	47.706	Astyanax_mexicanus
ENSPSIG00000000672	-	85	52.381	ENSAMXG00000032841	-	78	52.381	Astyanax_mexicanus
ENSPSIG00000000672	-	87	50.467	ENSAMXG00000042784	-	97	50.467	Astyanax_mexicanus
ENSPSIG00000000672	-	86	45.098	ENSAMXG00000038325	-	89	45.972	Astyanax_mexicanus
ENSPSIG00000000672	-	90	48.649	ENSAMXG00000034847	-	86	48.649	Astyanax_mexicanus
ENSPSIG00000000672	-	85	47.059	ENSAMXG00000042746	-	83	47.059	Astyanax_mexicanus
ENSPSIG00000000672	-	89	50.641	ENSBTAG00000038322	-	76	50.641	Bos_taurus
ENSPSIG00000000672	-	89	50.000	ENSCPBG00000026433	-	55	50.000	Chrysemys_picta_bellii
ENSPSIG00000000672	-	83	54.795	ENSCPBG00000013652	-	81	42.745	Chrysemys_picta_bellii
ENSPSIG00000000672	-	100	97.586	ENSCPBG00000001526	-	90	97.586	Chrysemys_picta_bellii
ENSPSIG00000000672	-	92	39.256	ENSCPBG00000008580	-	90	39.256	Chrysemys_picta_bellii
ENSPSIG00000000672	-	94	43.600	ENSCSAVG00000010960	-	99	44.872	Ciona_savignyi
ENSPSIG00000000672	-	89	43.511	ENSDNOG00000047495	-	78	43.511	Dasypus_novemcinctus
ENSPSIG00000000672	-	87	48.235	ENSEBUG00000011435	-	83	46.862	Eptatretus_burgeri
ENSPSIG00000000672	-	97	50.000	ENSEBUG00000002075	-	77	46.154	Eptatretus_burgeri
ENSPSIG00000000672	-	91	51.128	ENSEBUG00000012919	-	74	50.000	Eptatretus_burgeri
ENSPSIG00000000672	-	90	44.385	ENSEBUG00000014717	-	72	41.224	Eptatretus_burgeri
ENSPSIG00000000672	-	87	49.738	ENSEBUG00000011694	-	96	49.738	Eptatretus_burgeri
ENSPSIG00000000672	-	93	50.000	ENSEBUG00000008306	-	79	50.000	Eptatretus_burgeri
ENSPSIG00000000672	-	90	43.284	ENSEBUG00000015837	-	69	43.284	Eptatretus_burgeri
ENSPSIG00000000672	-	90	38.697	ENSEBUG00000013875	-	82	40.506	Eptatretus_burgeri
ENSPSIG00000000672	-	86	46.091	ENSEBUG00000005264	-	73	46.091	Eptatretus_burgeri
ENSPSIG00000000672	-	89	40.816	ENSEASG00005004469	-	70	40.816	Equus_asinus_asinus
ENSPSIG00000000672	-	90	43.125	ENSGMOG00000018506	-	100	43.125	Gadus_morhua
ENSPSIG00000000672	-	85	51.064	ENSGALG00000044069	-	55	51.064	Gallus_gallus
ENSPSIG00000000672	-	89	44.141	ENSGALG00000053507	-	78	44.141	Gallus_gallus
ENSPSIG00000000672	-	92	54.268	ENSGALG00000055127	-	72	54.268	Gallus_gallus
ENSPSIG00000000672	-	96	51.681	ENSGALG00000054325	-	97	51.681	Gallus_gallus
ENSPSIG00000000672	-	85	44.082	ENSGALG00000049609	-	56	44.082	Gallus_gallus
ENSPSIG00000000672	-	84	52.128	ENSGALG00000046336	-	98	52.128	Gallus_gallus
ENSPSIG00000000672	-	89	59.358	ENSGACG00000006283	-	94	59.358	Gasterosteus_aculeatus
ENSPSIG00000000672	-	92	47.899	ENSGAGG00000011366	-	97	47.899	Gopherus_agassizii
ENSPSIG00000000672	-	85	44.828	ENSGAGG00000018885	-	68	44.828	Gopherus_agassizii
ENSPSIG00000000672	-	92	93.431	ENSGAGG00000011399	-	84	93.431	Gopherus_agassizii
ENSPSIG00000000672	-	84	42.915	ENSHCOG00000018201	-	81	42.915	Hippocampus_comes
ENSPSIG00000000672	-	87	41.463	ENSIPUG00000012109	ZN12	51	41.463	Ictalurus_punctatus
ENSPSIG00000000672	-	84	44.091	ENSIPUG00000021515	-	88	44.091	Ictalurus_punctatus
ENSPSIG00000000672	-	92	46.354	ENSIPUG00000015468	-	80	45.798	Ictalurus_punctatus
ENSPSIG00000000672	-	90	45.116	ENSJJAG00000023633	Zfp672	89	45.116	Jaculus_jaculus
ENSPSIG00000000672	-	91	37.652	ENSLACG00000009005	-	100	36.842	Latimeria_chalumnae
ENSPSIG00000000672	-	91	47.059	ENSLACG00000022211	-	78	47.059	Latimeria_chalumnae
ENSPSIG00000000672	-	86	39.506	ENSLACG00000005264	-	97	39.506	Latimeria_chalumnae
ENSPSIG00000000672	-	92	45.038	ENSLOCG00000017864	-	99	45.038	Lepisosteus_oculatus
ENSPSIG00000000672	-	85	45.935	ENSMGAG00000013362	-	100	45.935	Meleagris_gallopavo
ENSPSIG00000000672	-	92	44.651	ENSMAUG00000009945	Zfp672	89	44.651	Mesocricetus_auratus
ENSPSIG00000000672	-	85	63.226	ENSMMOG00000003923	-	82	63.226	Mola_mola
ENSPSIG00000000672	-	85	43.096	ENSMODG00000001880	-	79	43.096	Monodelphis_domestica
ENSPSIG00000000672	-	93	41.004	ENSMODG00000010532	-	85	41.004	Monodelphis_domestica
ENSPSIG00000000672	-	93	41.434	ENSMODG00000014052	-	99	41.434	Monodelphis_domestica
ENSPSIG00000000672	-	92	44.651	MGP_CAROLIEiJ_G0016391	Zfp672	93	42.500	Mus_caroli
ENSPSIG00000000672	-	92	46.250	MGP_CAROLIEiJ_G0030502	-	65	46.250	Mus_caroli
ENSPSIG00000000672	-	92	45.116	ENSMUSG00000049755	Zfp672	88	45.116	Mus_musculus
ENSPSIG00000000672	-	90	43.515	ENSMUSG00000030823	9130019O22Rik	70	44.538	Mus_musculus
ENSPSIG00000000672	-	92	45.116	MGP_SPRETEiJ_G0017233	Zfp672	84	50.000	Mus_spretus
ENSPSIG00000000672	-	99	44.483	MGP_SPRETEiJ_G0031613	-	83	49.167	Mus_spretus
ENSPSIG00000000672	-	96	46.667	ENSNGAG00000015777	Zim1	57	46.667	Nannospalax_galili
ENSPSIG00000000672	-	85	43.777	ENSNBRG00000000708	-	88	43.777	Neolamprologus_brichardi
ENSPSIG00000000672	-	85	67.910	ENSORLG00020001922	-	88	67.133	Oryzias_latipes_hni
ENSPSIG00000000672	-	93	70.000	ENSOMEG00000001598	-	69	70.000	Oryzias_melastigma
ENSPSIG00000000672	-	90	40.000	ENSPREG00000002642	-	91	40.000	Poecilia_reticulata
ENSPSIG00000000672	-	87	46.721	ENSPNYG00000015486	-	51	46.721	Pundamilia_nyererei
ENSPSIG00000000672	-	84	51.408	ENSPNAG00000000088	-	82	51.408	Pygocentrus_nattereri
ENSPSIG00000000672	-	85	49.032	ENSPNAG00000018395	-	59	49.032	Pygocentrus_nattereri
ENSPSIG00000000672	-	92	45.116	ENSRNOG00000002713	Zfp672	88	45.116	Rattus_norvegicus
ENSPSIG00000000672	-	93	41.126	ENSSHAG00000018106	-	76	41.126	Sarcophilus_harrisii
ENSPSIG00000000672	-	82	50.000	ENSSFOG00015019818	-	73	50.000	Scleropages_formosus
ENSPSIG00000000672	-	88	38.211	ENSSMAG00000004252	-	84	38.211	Scophthalmus_maximus
ENSPSIG00000000672	-	84	51.075	ENSSPUG00000004366	-	56	51.075	Sphenodon_punctatus
ENSPSIG00000000672	-	87	45.833	ENSSPUG00000010016	-	92	46.759	Sphenodon_punctatus
ENSPSIG00000000672	-	84	72.727	ENSSPAG00000021653	-	94	72.727	Stegastes_partitus
ENSPSIG00000000672	-	87	50.000	ENSTGUG00000015210	-	100	50.000	Taeniopygia_guttata
ENSPSIG00000000672	-	84	57.843	ENSTGUG00000018351	-	99	57.843	Taeniopygia_guttata
ENSPSIG00000000672	-	84	43.836	ENSTRUG00000022066	-	88	41.615	Takifugu_rubripes
ENSPSIG00000000672	-	93	44.322	ENSXETG00000031192	-	100	46.559	Xenopus_tropicalis
ENSPSIG00000000672	-	97	52.752	ENSXCOG00000006553	-	86	52.752	Xiphophorus_couchianus
ENSPSIG00000000672	-	90	40.187	ENSXMAG00000026680	-	80	38.326	Xiphophorus_maculatus