EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPSIG00000001504 (Gene tree)
Gene ID
102451631
Gene Symbol
LIG4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
2739 bases
Position
chrJH206756.1:3013333-3016071
Accession
102451631
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000001500RNA_ligasePF09414.101.8e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000001504LIG4-2012739XM_006115563ENSPSIP00000001500912 (aa)XP_006115625K7F0E0
Gene Model
Click here to download ENSPSIG00000001504's gene model file
Pathways
Pathway IDPathway NameSource
pss03450Non-homologous end-joiningKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000001504's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000001504LIG49979.231ENSG00000174405LIG410079.858Homo_sapiens
ENSPSIG00000001504LIG410067.544ENSAPOG00000000866lig410067.763Acanthochromis_polyacanthus
ENSPSIG00000001504LIG49975.960ENSAMEG00000019685LIG49975.960Ailuropoda_melanoleuca
ENSPSIG00000001504LIG49968.992ENSACIG00000018309lig49969.214Amphilophus_citrinellus
ENSPSIG00000001504LIG49967.991ENSAOCG00000011768lig410067.873Amphiprion_ocellaris
ENSPSIG00000001504LIG49968.102ENSAPEG00000017815lig410067.982Amphiprion_percula
ENSPSIG00000001504LIG49967.881ENSATEG00000005583lig49968.102Anabas_testudineus
ENSPSIG00000001504LIG49683.827ENSAPLG00000001673LIG49983.827Anas_platyrhynchos
ENSPSIG00000001504LIG49982.948ENSACAG00000014566LIG410082.948Anolis_carolinensis
ENSPSIG00000001504LIG49978.462ENSANAG00000012446LIG49978.462Aotus_nancymaae
ENSPSIG00000001504LIG49968.057ENSACLG00000027051lig49968.057Astatotilapia_calliptera
ENSPSIG00000001504LIG49967.437ENSAMXG00000008192lig49467.437Astyanax_mexicanus
ENSPSIG00000001504LIG49976.813ENSBTAG00000015868LIG49976.813Bos_taurus
ENSPSIG00000001504LIG49978.132ENSCJAG00000014689LIG49978.132Callithrix_jacchus
ENSPSIG00000001504LIG410076.638ENSCAFG00000006031LIG410076.638Canis_familiaris
ENSPSIG00000001504LIG410076.638ENSCAFG00020021230LIG410076.638Canis_lupus_dingo
ENSPSIG00000001504LIG49976.593ENSCHIG00000001019LIG49976.593Capra_hircus
ENSPSIG00000001504LIG49977.630ENSCAPG00000006284LIG49977.630Cavia_aperea
ENSPSIG00000001504LIG49977.033ENSCPOG00000014266LIG49977.033Cavia_porcellus
ENSPSIG00000001504LIG49979.011ENSCCAG00000019971LIG49979.011Cebus_capucinus
ENSPSIG00000001504LIG49979.231ENSCATG00000021075LIG49979.231Cercocebus_atys
ENSPSIG00000001504LIG49977.253ENSCLAG00000003376LIG49977.253Chinchilla_lanigera
ENSPSIG00000001504LIG410079.367ENSCSAG00000000211LIG410079.367Chlorocebus_sabaeus
ENSPSIG00000001504LIG49994.463ENSCPBG00000023291LIG410094.311Chrysemys_picta_bellii
ENSPSIG00000001504LIG46846.508ENSCING00000009536-9646.508Ciona_intestinalis
ENSPSIG00000001504LIG48346.255ENSCSAVG00000010336-9846.255Ciona_savignyi
ENSPSIG00000001504LIG410078.712ENSCANG00000005805LIG410078.712Colobus_angolensis_palliatus
ENSPSIG00000001504LIG49976.425ENSCGRG00001012072Lig49976.425Cricetulus_griseus_chok1gshd
ENSPSIG00000001504LIG49976.425ENSCGRG00000013417Lig49976.425Cricetulus_griseus_crigri
ENSPSIG00000001504LIG49669.292ENSCSEG00000013905lig49569.292Cynoglossus_semilaevis
ENSPSIG00000001504LIG410069.113ENSCVAG00000007896lig410069.113Cyprinodon_variegatus
ENSPSIG00000001504LIG410067.215ENSDARG00000060620lig410067.215Danio_rerio
ENSPSIG00000001504LIG49978.289ENSDNOG00000000513LIG49978.289Dasypus_novemcinctus
ENSPSIG00000001504LIG49977.363ENSDORG00000027303Lig49977.363Dipodomys_ordii
ENSPSIG00000001504LIG48831.910FBgn0030506Lig49031.910Drosophila_melanogaster
ENSPSIG00000001504LIG49875.388ENSETEG00000015563LIG410075.721Echinops_telfairi
ENSPSIG00000001504LIG49843.690ENSEBUG00000014243lig49843.690Eptatretus_burgeri
ENSPSIG00000001504LIG49977.582ENSEASG00005022073LIG49977.582Equus_asinus_asinus
ENSPSIG00000001504LIG49977.253ENSECAG00000003257LIG49977.253Equus_caballus
ENSPSIG00000001504LIG49969.484ENSELUG00000006787lig49969.484Esox_lucius
ENSPSIG00000001504LIG410076.419ENSFCAG00000031985LIG410076.419Felis_catus
ENSPSIG00000001504LIG48983.395ENSFALG00000004214LIG49983.395Ficedula_albicollis
ENSPSIG00000001504LIG49977.143ENSFDAG00000008973LIG49977.143Fukomys_damarensis
ENSPSIG00000001504LIG410068.311ENSFHEG00000007398lig49068.653Fundulus_heteroclitus
ENSPSIG00000001504LIG48565.982ENSGMOG00000012843lig49965.982Gadus_morhua
ENSPSIG00000001504LIG410083.133ENSGALG00000016854LIG410083.133Gallus_gallus
ENSPSIG00000001504LIG49868.827ENSGAFG00000019779lig49568.172Gambusia_affinis
ENSPSIG00000001504LIG49965.932ENSGACG00000014135lig49965.932Gasterosteus_aculeatus
ENSPSIG00000001504LIG49979.011ENSGGOG00000027771LIG49979.011Gorilla_gorilla
ENSPSIG00000001504LIG49967.838ENSHBUG00000006245lig49967.838Haplochromis_burtoni
ENSPSIG00000001504LIG49976.703ENSHGLG00000000718LIG49976.703Heterocephalus_glaber_female
ENSPSIG00000001504LIG49976.703ENSHGLG00100003265LIG49976.703Heterocephalus_glaber_male
ENSPSIG00000001504LIG49868.409ENSHCOG00000012010lig49868.409Hippocampus_comes
ENSPSIG00000001504LIG410068.127ENSIPUG00000013748lig410068.127Ictalurus_punctatus
ENSPSIG00000001504LIG49977.717ENSSTOG00000024303LIG49977.717Ictidomys_tridecemlineatus
ENSPSIG00000001504LIG49977.033ENSJJAG00000006750Lig49977.033Jaculus_jaculus
ENSPSIG00000001504LIG410066.228ENSKMAG00000001149lig410066.228Kryptolebias_marmoratus
ENSPSIG00000001504LIG49167.754ENSLBEG00000014578lig410067.995Labrus_bergylta
ENSPSIG00000001504LIG410075.658ENSLACG00000003282LIG410075.658Latimeria_chalumnae
ENSPSIG00000001504LIG410072.210ENSLOCG00000008901lig49972.210Lepisosteus_oculatus
ENSPSIG00000001504LIG49977.327ENSLAFG00000031152LIG49977.327Loxodonta_africana
ENSPSIG00000001504LIG410079.039ENSMFAG00000037235LIG410079.039Macaca_fascicularis
ENSPSIG00000001504LIG410079.039ENSMMUG00000008874LIG410079.039Macaca_mulatta
ENSPSIG00000001504LIG410079.039ENSMNEG00000023575LIG410079.039Macaca_nemestrina
ENSPSIG00000001504LIG410079.148ENSMLEG00000026720LIG410079.148Mandrillus_leucophaeus
ENSPSIG00000001504LIG410068.750ENSMAMG00000008472lig49968.969Mastacembelus_armatus
ENSPSIG00000001504LIG49968.057ENSMZEG00005001855lig49968.057Maylandia_zebra
ENSPSIG00000001504LIG410084.228ENSMGAG00000015532LIG410084.228Meleagris_gallopavo
ENSPSIG00000001504LIG49974.973ENSMOCG00000019000Lig49974.973Microtus_ochrogaster
ENSPSIG00000001504LIG410066.776ENSMMOG00000004390lig410066.776Mola_mola
ENSPSIG00000001504LIG49978.791ENSMODG00000025064LIG49979.144Monodelphis_domestica
ENSPSIG00000001504LIG49968.252ENSMALG00000008555lig49968.252Monopterus_albus
ENSPSIG00000001504LIG49976.400MGP_CAROLIEiJ_G0030809Lig49976.400Mus_caroli
ENSPSIG00000001504LIG49976.070ENSMUSG00000049717Lig49976.070Mus_musculus
ENSPSIG00000001504LIG49976.729MGP_PahariEiJ_G0021270Lig49976.729Mus_pahari
ENSPSIG00000001504LIG49976.180MGP_SPRETEiJ_G0031917Lig49976.180Mus_spretus
ENSPSIG00000001504LIG49975.851ENSMPUG00000018675LIG49975.851Mustela_putorius_furo
ENSPSIG00000001504LIG49978.022ENSMLUG00000001267LIG49978.022Myotis_lucifugus
ENSPSIG00000001504LIG49977.102ENSNGAG00000013258Lig49977.102Nannospalax_galili
ENSPSIG00000001504LIG49967.947ENSNBRG00000021252lig49967.947Neolamprologus_brichardi
ENSPSIG00000001504LIG49978.571ENSNLEG00000007888LIG49978.571Nomascus_leucogenys
ENSPSIG00000001504LIG49975.714ENSOPRG00000005765LIG49975.714Ochotona_princeps
ENSPSIG00000001504LIG49976.813ENSODEG00000019683LIG49976.813Octodon_degus
ENSPSIG00000001504LIG49967.508ENSONIG00000011969lig49967.728Oreochromis_niloticus
ENSPSIG00000001504LIG49977.253ENSOCUG00000015734LIG49977.253Oryctolagus_cuniculus
ENSPSIG00000001504LIG49967.251ENSORLG00000004041lig49967.251Oryzias_latipes
ENSPSIG00000001504LIG49967.798ENSORLG00020019607lig49967.798Oryzias_latipes_hni
ENSPSIG00000001504LIG49967.141ENSORLG00015017754lig49967.141Oryzias_latipes_hsok
ENSPSIG00000001504LIG47572.287ENSOMEG00000003459lig49972.287Oryzias_melastigma
ENSPSIG00000001504LIG49877.827ENSOGAG00000032120LIG49977.827Otolemur_garnettii
ENSPSIG00000001504LIG48179.435ENSOARG00000005590LIG49879.435Ovis_aries
ENSPSIG00000001504LIG49978.791ENSPPAG00000032998LIG49978.791Pan_paniscus
ENSPSIG00000001504LIG410076.856ENSPPRG00000017804LIG410076.856Panthera_pardus
ENSPSIG00000001504LIG410076.747ENSPTIG00000010051LIG410076.747Panthera_tigris_altaica
ENSPSIG00000001504LIG49978.901ENSPTRG00000006025LIG49978.901Pan_troglodytes
ENSPSIG00000001504LIG49979.341ENSPANG00000007562LIG49979.341Papio_anubis
ENSPSIG00000001504LIG49969.604ENSPKIG00000011645lig49869.604Paramormyrops_kingsleyae
ENSPSIG00000001504LIG49866.592ENSPMGG00000013486lig49966.300Periophthalmus_magnuspinnatus
ENSPSIG00000001504LIG49976.535ENSPEMG00000000076Lig49976.535Peromyscus_maniculatus_bairdii
ENSPSIG00000001504LIG49978.618ENSPCIG00000021882LIG49978.618Phascolarctos_cinereus
ENSPSIG00000001504LIG49869.128ENSPFOG00000000797lig49968.467Poecilia_formosa
ENSPSIG00000001504LIG49869.016ENSPLAG00000001196lig49968.357Poecilia_latipinna
ENSPSIG00000001504LIG49869.239ENSPMEG00000021353lig49968.578Poecilia_mexicana
ENSPSIG00000001504LIG49869.016ENSPREG00000007323lig49968.357Poecilia_reticulata
ENSPSIG00000001504LIG49978.901ENSPPYG00000005540LIG49978.901Pongo_abelii
ENSPSIG00000001504LIG410076.856ENSPVAG00000016403LIG410076.856Pteropus_vampyrus
ENSPSIG00000001504LIG49968.287ENSPNYG00000009660lig49968.287Pundamilia_nyererei
ENSPSIG00000001504LIG49968.854ENSPNAG00000028069LIG49968.854Pygocentrus_nattereri
ENSPSIG00000001504LIG49968.854ENSPNAG00000028056lig49968.854Pygocentrus_nattereri
ENSPSIG00000001504LIG49975.412ENSRNOG00000014605Lig49975.412Rattus_norvegicus
ENSPSIG00000001504LIG410077.620ENSRBIG00000039962LIG410077.620Rhinopithecus_bieti
ENSPSIG00000001504LIG410078.603ENSRROG00000006040LIG410078.603Rhinopithecus_roxellana
ENSPSIG00000001504LIG49978.132ENSSBOG00000019029LIG49978.132Saimiri_boliviensis_boliviensis
ENSPSIG00000001504LIG49976.180ENSSHAG00000009525LIG49976.645Sarcophilus_harrisii
ENSPSIG00000001504LIG410069.079ENSSFOG00015012835lig410069.079Scleropages_formosus
ENSPSIG00000001504LIG410066.009ENSSMAG00000011267lig410066.009Scophthalmus_maximus
ENSPSIG00000001504LIG410067.432ENSSDUG00000010343lig410067.432Seriola_dumerili
ENSPSIG00000001504LIG410066.120ENSSLDG00000003239lig410066.120Seriola_lalandi_dorsalis
ENSPSIG00000001504LIG49975.000ENSSARG00000006573LIG49975.000Sorex_araneus
ENSPSIG00000001504LIG49287.143ENSSPUG00000002444LIG410087.143Sphenodon_punctatus
ENSPSIG00000001504LIG49967.731ENSSPAG00000001609lig49967.731Stegastes_partitus
ENSPSIG00000001504LIG49977.338ENSSSCG00000009540LIG49977.338Sus_scrofa
ENSPSIG00000001504LIG49982.503ENSTGUG00000010795LIG49982.503Taeniopygia_guttata
ENSPSIG00000001504LIG49967.991ENSTRUG00000009984lig49967.991Takifugu_rubripes
ENSPSIG00000001504LIG410067.544ENSTNIG00000010348lig410067.763Tetraodon_nigroviridis
ENSPSIG00000001504LIG49978.681ENSTBEG00000017741LIG49978.681Tupaia_belangeri
ENSPSIG00000001504LIG49976.813ENSTTRG00000012660LIG49976.813Tursiops_truncatus
ENSPSIG00000001504LIG49975.960ENSUAMG00000003773LIG49975.960Ursus_americanus
ENSPSIG00000001504LIG410074.452ENSXETG00000002654lig410074.452Xenopus_tropicalis
ENSPSIG00000001504LIG49869.016ENSXCOG00000017401lig49868.966Xiphophorus_couchianus
ENSPSIG00000001504LIG49869.351ENSXMAG00000015142lig49869.299Xiphophorus_maculatus

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