EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000002202 (Gene tree)
Gene ID: 102454900
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 59928 bases
Position: chrJH209873.1:3736-63663
Accession: 102454900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002213	KH_1	PF00013.29	7e-10	1	1
ENSPSIP00000002213	DEAD	PF00270.29	4.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002220	-	2138	XM_006127237	ENSPSIP00000002213	622 (aa)	-	K7F2F3

Gene Model

Click here to download ENSPSIG00000002202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000002202	-	56	36.857	ENSPSIG00000006056	DDX47	75	36.857
ENSPSIG00000002202	-	50	30.183	ENSPSIG00000012901	DDX55	59	30.183
ENSPSIG00000002202	-	59	33.065	ENSPSIG00000005055	DDX54	75	33.065
ENSPSIG00000002202	-	59	32.791	ENSPSIG00000017404	EIF4A2	92	31.471
ENSPSIG00000002202	-	57	32.033	ENSPSIG00000013230	DDX6	72	32.033
ENSPSIG00000002202	-	58	37.435	ENSPSIG00000014493	DDX27	66	35.948
ENSPSIG00000002202	-	57	31.335	ENSPSIG00000014874	DDX10	62	31.335
ENSPSIG00000002202	-	60	33.586	ENSPSIG00000010226	DDX52	63	33.586
ENSPSIG00000002202	-	67	39.294	ENSPSIG00000010289	DDX42	50	39.294
ENSPSIG00000002202	-	68	45.958	ENSPSIG00000004118	-	64	49.014
ENSPSIG00000002202	-	68	44.573	ENSPSIG00000010830	DDX5	70	44.573
ENSPSIG00000002202	-	59	33.512	ENSPSIG00000005060	DDX41	73	33.512
ENSPSIG00000002202	-	60	38.381	ENSPSIG00000017179	DDX4	63	38.381
ENSPSIG00000002202	-	56	33.333	ENSPSIG00000004724	DDX21	53	33.333
ENSPSIG00000002202	-	58	41.223	ENSPSIG00000011217	-	57	41.223
ENSPSIG00000002202	-	54	33.239	ENSPSIG00000002977	DDX18	58	33.152
ENSPSIG00000002202	-	57	30.769	ENSPSIG00000006722	DDX31	57	30.769
ENSPSIG00000002202	-	53	33.038	ENSPSIG00000008625	DDX49	80	33.038
ENSPSIG00000002202	-	58	32.782	ENSPSIG00000008719	EIF4A1	79	32.782
ENSPSIG00000002202	-	75	30.737	ENSPSIG00000016333	DDX59	71	30.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002202	-	88	65.709	ENSAPOG00000001712	ddx43	78	65.709	Acanthochromis_polyacanthus
ENSPSIG00000002202	-	74	64.179	ENSACIG00000012170	ddx43	73	64.179	Amphilophus_citrinellus
ENSPSIG00000002202	-	88	68.468	ENSAOCG00000001331	ddx43	78	68.468	Amphiprion_ocellaris
ENSPSIG00000002202	-	88	69.035	ENSAPEG00000001133	ddx43	77	69.035	Amphiprion_percula
ENSPSIG00000002202	-	88	67.153	ENSATEG00000012664	ddx43	79	67.153	Anabas_testudineus
ENSPSIG00000002202	-	85	81.733	ENSAPLG00000010182	-	93	86.292	Anas_platyrhynchos
ENSPSIG00000002202	-	88	80.325	ENSACAG00000004387	-	85	80.325	Anolis_carolinensis
ENSPSIG00000002202	-	88	65.946	ENSACLG00000026081	ddx43	80	65.946	Astatotilapia_calliptera
ENSPSIG00000002202	-	88	66.243	ENSAMXG00000004457	ddx43	82	62.355	Astyanax_mexicanus
ENSPSIG00000002202	-	70	47.191	WBGene00013214	Y54G11A.3	88	47.191	Caenorhabditis_elegans
ENSPSIG00000002202	-	85	56.827	ENSCVAG00000009980	ddx43	80	56.827	Cyprinodon_variegatus
ENSPSIG00000002202	-	89	67.914	ENSDARG00000022614	ddx43	78	68.028	Danio_rerio
ENSPSIG00000002202	-	86	49.644	FBgn0037549	CG7878	79	49.644	Drosophila_melanogaster
ENSPSIG00000002202	-	65	47.257	ENSETEG00000019547	-	65	47.257	Echinops_telfairi
ENSPSIG00000002202	-	80	45.309	ENSETEG00000014626	-	93	45.309	Echinops_telfairi
ENSPSIG00000002202	-	89	65.530	ENSELUG00000012126	ddx43	84	65.530	Esox_lucius
ENSPSIG00000002202	-	99	75.120	ENSFALG00000007042	-	82	81.636	Ficedula_albicollis
ENSPSIG00000002202	-	71	72.851	ENSFHEG00000011226	ddx43	80	72.851	Fundulus_heteroclitus
ENSPSIG00000002202	-	71	68.694	ENSGMOG00000004178	ddx43	97	68.694	Gadus_morhua
ENSPSIG00000002202	-	64	87.562	ENSGALG00000015928	-	92	87.562	Gallus_gallus
ENSPSIG00000002202	-	90	62.862	ENSGAFG00000012622	ddx43	84	62.862	Gambusia_affinis
ENSPSIG00000002202	-	87	66.300	ENSGACG00000012072	ddx43	93	66.300	Gasterosteus_aculeatus
ENSPSIG00000002202	-	100	79.647	ENSGAGG00000025230	-	90	79.647	Gopherus_agassizii
ENSPSIG00000002202	-	88	65.766	ENSHBUG00000011653	ddx43	80	65.766	Haplochromis_burtoni
ENSPSIG00000002202	-	81	67.191	ENSHCOG00000014704	ddx43	77	67.123	Hippocampus_comes
ENSPSIG00000002202	-	88	67.089	ENSIPUG00000023423	ddx43	81	67.269	Ictalurus_punctatus
ENSPSIG00000002202	-	90	64.645	ENSKMAG00000016167	ddx43	83	64.645	Kryptolebias_marmoratus
ENSPSIG00000002202	-	89	65.647	ENSLBEG00000007913	ddx43	80	66.068	Labrus_bergylta
ENSPSIG00000002202	-	77	75.565	ENSLACG00000000741	ddx43	100	75.565	Latimeria_chalumnae
ENSPSIG00000002202	-	88	68.978	ENSLOCG00000016170	ddx43	81	68.978	Lepisosteus_oculatus
ENSPSIG00000002202	-	86	64.074	ENSMAMG00000022128	ddx43	78	64.074	Mastacembelus_armatus
ENSPSIG00000002202	-	88	65.946	ENSMZEG00005027349	ddx43	80	65.946	Maylandia_zebra
ENSPSIG00000002202	-	88	78.650	ENSMGAG00000013832	-	94	78.650	Meleagris_gallopavo
ENSPSIG00000002202	-	91	63.986	ENSMMOG00000007346	ddx43	84	63.986	Mola_mola
ENSPSIG00000002202	-	90	68.917	ENSMODG00000018546	-	92	64.839	Monodelphis_domestica
ENSPSIG00000002202	-	91	60.284	ENSMODG00000014335	-	95	60.284	Monodelphis_domestica
ENSPSIG00000002202	-	91	64.151	ENSMALG00000020673	ddx43	83	64.151	Monopterus_albus
ENSPSIG00000002202	-	88	66.788	ENSNBRG00000010942	ddx43	80	66.788	Neolamprologus_brichardi
ENSPSIG00000002202	-	89	65.487	ENSONIG00000001195	ddx43	85	65.487	Oreochromis_niloticus
ENSPSIG00000002202	-	60	73.458	ENSOANG00000006467	-	100	72.135	Ornithorhynchus_anatinus
ENSPSIG00000002202	-	89	63.700	ENSORLG00000002267	ddx43	87	63.972	Oryzias_latipes
ENSPSIG00000002202	-	89	63.700	ENSORLG00020018592	ddx43	88	63.700	Oryzias_latipes_hni
ENSPSIG00000002202	-	89	63.525	ENSORLG00015004854	ddx43	87	63.796	Oryzias_latipes_hsok
ENSPSIG00000002202	-	89	64.348	ENSOMEG00000023418	ddx43	88	64.348	Oryzias_melastigma
ENSPSIG00000002202	-	88	66.727	ENSPKIG00000002941	ddx43	77	66.727	Paramormyrops_kingsleyae
ENSPSIG00000002202	-	91	57.447	ENSPCIG00000002492	-	90	57.447	Phascolarctos_cinereus
ENSPSIG00000002202	-	65	79.703	ENSPCIG00000017981	-	91	79.703	Phascolarctos_cinereus
ENSPSIG00000002202	-	87	65.591	ENSPFOG00000004241	ddx43	84	63.328	Poecilia_formosa
ENSPSIG00000002202	-	87	65.653	ENSPLAG00000023362	ddx43	84	63.652	Poecilia_latipinna
ENSPSIG00000002202	-	90	63.328	ENSPMEG00000004870	ddx43	84	63.328	Poecilia_mexicana
ENSPSIG00000002202	-	87	58.727	ENSPREG00000000923	ddx43	83	56.897	Poecilia_reticulata
ENSPSIG00000002202	-	85	64.165	ENSPNYG00000009064	ddx43	77	64.165	Pundamilia_nyererei
ENSPSIG00000002202	-	89	67.321	ENSPNAG00000001232	ddx43	78	67.321	Pygocentrus_nattereri
ENSPSIG00000002202	-	87	64.154	ENSSHAG00000016933	-	93	64.154	Sarcophilus_harrisii
ENSPSIG00000002202	-	90	68.319	ENSSHAG00000001847	-	94	64.434	Sarcophilus_harrisii
ENSPSIG00000002202	-	85	63.483	ENSSFOG00015012193	ddx43	82	63.483	Scleropages_formosus
ENSPSIG00000002202	-	89	66.034	ENSSMAG00000019288	ddx43	76	67.993	Scophthalmus_maximus
ENSPSIG00000002202	-	88	66.667	ENSSDUG00000020120	ddx43	78	67.027	Seriola_dumerili
ENSPSIG00000002202	-	97	62.131	ENSSLDG00000017225	ddx43	78	65.241	Seriola_lalandi_dorsalis
ENSPSIG00000002202	-	73	77.681	ENSSPUG00000018097	-	93	77.412	Sphenodon_punctatus
ENSPSIG00000002202	-	88	67.883	ENSSPAG00000006858	ddx43	78	68.000	Stegastes_partitus
ENSPSIG00000002202	-	89	81.004	ENSTGUG00000012684	-	94	81.004	Taeniopygia_guttata
ENSPSIG00000002202	-	87	61.759	ENSTRUG00000012795	ddx43	81	61.759	Takifugu_rubripes
ENSPSIG00000002202	-	88	64.855	ENSTNIG00000009822	ddx43	94	65.217	Tetraodon_nigroviridis
ENSPSIG00000002202	-	94	72.128	ENSXETG00000011767	ddx43	87	72.128	Xenopus_tropicalis
ENSPSIG00000002202	-	72	73.214	ENSXCOG00000013810	ddx43	69	73.214	Xiphophorus_couchianus
ENSPSIG00000002202	-	90	63.328	ENSXMAG00000017126	ddx43	84	63.328	Xiphophorus_maculatus