EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000002213 (Gene tree)
Gene ID: 102457867
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 11506 bases
Position: chrJH208004.1:183706-195211
Accession: 102457867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002224	zf-U11-48K	PF05253.12	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002231	SNRNP48-201	2019	XM_006120134	ENSPSIP00000002224	317 (aa)	XP_006120196	K7F2G4

Gene Model

Click here to download ENSPSIG00000002213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002213	SNRNP48	92	63.051	ENSG00000168566	SNRNP48	87	61.613	Homo_sapiens
ENSPSIG00000002213	SNRNP48	74	51.899	ENSAPOG00000021430	snrnp48	80	47.297	Acanthochromis_polyacanthus
ENSPSIG00000002213	SNRNP48	94	61.967	ENSAMEG00000017349	SNRNP48	89	61.199	Ailuropoda_melanoleuca
ENSPSIG00000002213	SNRNP48	76	46.939	ENSACIG00000002032	snrnp48	80	42.617	Amphilophus_citrinellus
ENSPSIG00000002213	SNRNP48	74	51.477	ENSAOCG00000010562	snrnp48	80	46.689	Amphiprion_ocellaris
ENSPSIG00000002213	SNRNP48	74	50.633	ENSAPEG00000003231	snrnp48	80	46.358	Amphiprion_percula
ENSPSIG00000002213	SNRNP48	65	53.810	ENSATEG00000020210	snrnp48	84	47.079	Anabas_testudineus
ENSPSIG00000002213	SNRNP48	94	75.168	ENSACAG00000002811	SNRNP48	90	75.168	Anolis_carolinensis
ENSPSIG00000002213	SNRNP48	92	62.457	ENSANAG00000033538	SNRNP48	87	61.613	Aotus_nancymaae
ENSPSIG00000002213	SNRNP48	87	47.842	ENSAMXG00000015309	snrnp48	86	46.865	Astyanax_mexicanus
ENSPSIG00000002213	SNRNP48	92	64.068	ENSBTAG00000001123	SNRNP48	84	63.366	Bos_taurus
ENSPSIG00000002213	SNRNP48	92	62.799	ENSCJAG00000021330	SNRNP48	87	61.935	Callithrix_jacchus
ENSPSIG00000002213	SNRNP48	95	62.013	ENSCAFG00000009574	SNRNP48	72	61.935	Canis_familiaris
ENSPSIG00000002213	SNRNP48	97	61.465	ENSCAFG00020013203	SNRNP48	88	61.392	Canis_lupus_dingo
ENSPSIG00000002213	SNRNP48	92	64.068	ENSCHIG00000015216	SNRNP48	84	63.366	Capra_hircus
ENSPSIG00000002213	SNRNP48	93	62.712	ENSTSYG00000000698	SNRNP48	88	60.759	Carlito_syrichta
ENSPSIG00000002213	SNRNP48	94	62.290	ENSCAPG00000006768	SNRNP48	92	62.542	Cavia_aperea
ENSPSIG00000002213	SNRNP48	92	62.457	ENSCPOG00000007910	SNRNP48	84	62.542	Cavia_porcellus
ENSPSIG00000002213	SNRNP48	92	62.457	ENSCCAG00000035652	SNRNP48	87	61.613	Cebus_capucinus
ENSPSIG00000002213	SNRNP48	92	62.712	ENSCATG00000033947	SNRNP48	87	61.290	Cercocebus_atys
ENSPSIG00000002213	SNRNP48	92	63.481	ENSCLAG00000003765	SNRNP48	84	63.000	Chinchilla_lanigera
ENSPSIG00000002213	SNRNP48	94	61.204	ENSCSAG00000007409	SNRNP48	84	62.126	Chlorocebus_sabaeus
ENSPSIG00000002213	SNRNP48	94	88.333	ENSCPBG00000019146	SNRNP48	91	88.333	Chrysemys_picta_bellii
ENSPSIG00000002213	SNRNP48	92	61.775	ENSCANG00000030017	SNRNP48	87	61.290	Colobus_angolensis_palliatus
ENSPSIG00000002213	SNRNP48	94	52.013	ENSCGRG00001008805	-	83	52.013	Cricetulus_griseus_chok1gshd
ENSPSIG00000002213	SNRNP48	94	63.545	ENSCGRG00001001076	-	84	63.455	Cricetulus_griseus_chok1gshd
ENSPSIG00000002213	SNRNP48	94	63.545	ENSCGRG00000007781	Snrnp48	84	63.455	Cricetulus_griseus_crigri
ENSPSIG00000002213	SNRNP48	68	49.537	ENSCSEG00000000722	snrnp48	77	43.206	Cynoglossus_semilaevis
ENSPSIG00000002213	SNRNP48	88	45.936	ENSCVAG00000019829	snrnp48	79	44.164	Cyprinodon_variegatus
ENSPSIG00000002213	SNRNP48	78	50.598	ENSDARG00000039989	snrnp48	79	48.201	Danio_rerio
ENSPSIG00000002213	SNRNP48	95	62.333	ENSDNOG00000014978	SNRNP48	84	62.914	Dasypus_novemcinctus
ENSPSIG00000002213	SNRNP48	99	57.453	ENSDORG00000015140	Snrnp48	89	58.991	Dipodomys_ordii
ENSPSIG00000002213	SNRNP48	94	62.458	ENSEASG00005012021	SNRNP48	84	62.458	Equus_asinus_asinus
ENSPSIG00000002213	SNRNP48	94	62.458	ENSECAG00000026937	SNRNP48	84	62.458	Equus_caballus
ENSPSIG00000002213	SNRNP48	94	46.689	ENSEEUG00000015437	SNRNP48	84	46.026	Erinaceus_europaeus
ENSPSIG00000002213	SNRNP48	85	50.000	ENSELUG00000009766	snrnp48	79	47.297	Esox_lucius
ENSPSIG00000002213	SNRNP48	97	62.658	ENSFCAG00000018853	SNRNP48	88	62.658	Felis_catus
ENSPSIG00000002213	SNRNP48	99	73.885	ENSFALG00000007797	SNRNP48	96	72.611	Ficedula_albicollis
ENSPSIG00000002213	SNRNP48	94	60.535	ENSFDAG00000009231	SNRNP48	84	60.197	Fukomys_damarensis
ENSPSIG00000002213	SNRNP48	64	55.610	ENSFHEG00000014647	snrnp48	91	47.670	Fundulus_heteroclitus
ENSPSIG00000002213	SNRNP48	62	54.726	ENSGMOG00000018599	-	86	46.739	Gadus_morhua
ENSPSIG00000002213	SNRNP48	91	76.632	ENSGALG00000013005	SNRNP48	93	75.714	Gallus_gallus
ENSPSIG00000002213	SNRNP48	64	57.005	ENSGAFG00000021639	snrnp48	77	49.104	Gambusia_affinis
ENSPSIG00000002213	SNRNP48	94	87.333	ENSGAGG00000000865	SNRNP48	97	87.333	Gopherus_agassizii
ENSPSIG00000002213	SNRNP48	92	62.116	ENSGGOG00000013220	SNRNP48	87	61.613	Gorilla_gorilla
ENSPSIG00000002213	SNRNP48	64	53.659	ENSHBUG00000017066	snrnp48	84	44.966	Haplochromis_burtoni
ENSPSIG00000002213	SNRNP48	94	62.207	ENSHGLG00000015241	SNRNP48	84	62.876	Heterocephalus_glaber_female
ENSPSIG00000002213	SNRNP48	94	62.207	ENSHGLG00100010027	SNRNP48	84	62.876	Heterocephalus_glaber_male
ENSPSIG00000002213	SNRNP48	63	52.451	ENSHCOG00000014066	snrnp48	83	44.816	Hippocampus_comes
ENSPSIG00000002213	SNRNP48	97	61.709	ENSSTOG00000014635	SNRNP48	88	61.709	Ictidomys_tridecemlineatus
ENSPSIG00000002213	SNRNP48	96	59.672	ENSJJAG00000011495	Snrnp48	88	58.917	Jaculus_jaculus
ENSPSIG00000002213	SNRNP48	66	52.607	ENSKMAG00000016514	snrnp48	78	46.690	Kryptolebias_marmoratus
ENSPSIG00000002213	SNRNP48	66	52.133	ENSLBEG00000026249	snrnp48	79	45.583	Labrus_bergylta
ENSPSIG00000002213	SNRNP48	94	58.224	ENSLACG00000003958	SNRNP48	86	57.475	Latimeria_chalumnae
ENSPSIG00000002213	SNRNP48	83	56.180	ENSLOCG00000004187	snrnp48	84	53.481	Lepisosteus_oculatus
ENSPSIG00000002213	SNRNP48	92	61.775	ENSLAFG00000011152	SNRNP48	88	59.554	Loxodonta_africana
ENSPSIG00000002213	SNRNP48	92	62.116	ENSMFAG00000045216	SNRNP48	87	61.613	Macaca_fascicularis
ENSPSIG00000002213	SNRNP48	92	62.116	ENSMMUG00000014785	SNRNP48	87	61.613	Macaca_mulatta
ENSPSIG00000002213	SNRNP48	92	63.051	ENSMNEG00000042269	SNRNP48	87	61.613	Macaca_nemestrina
ENSPSIG00000002213	SNRNP48	92	62.116	ENSMLEG00000034004	SNRNP48	87	61.613	Mandrillus_leucophaeus
ENSPSIG00000002213	SNRNP48	64	54.106	ENSMAMG00000018673	snrnp48	72	46.309	Mastacembelus_armatus
ENSPSIG00000002213	SNRNP48	92	76.792	ENSMGAG00000006037	SNRNP48	99	76.792	Meleagris_gallopavo
ENSPSIG00000002213	SNRNP48	97	63.492	ENSMAUG00000011944	Snrnp48	88	63.492	Mesocricetus_auratus
ENSPSIG00000002213	SNRNP48	92	62.799	ENSMICG00000012497	SNRNP48	87	61.613	Microcebus_murinus
ENSPSIG00000002213	SNRNP48	97	61.783	ENSMOCG00000015555	Snrnp48	88	62.222	Microtus_ochrogaster
ENSPSIG00000002213	SNRNP48	62	51.759	ENSMMOG00000003072	-	62	51.759	Mola_mola
ENSPSIG00000002213	SNRNP48	83	71.970	ENSMODG00000009996	SNRNP48	82	69.032	Monodelphis_domestica
ENSPSIG00000002213	SNRNP48	91	46.392	ENSMALG00000005725	snrnp48	81	45.608	Monopterus_albus
ENSPSIG00000002213	SNRNP48	94	62.791	MGP_CAROLIEiJ_G0018441	Snrnp48	84	62.791	Mus_caroli
ENSPSIG00000002213	SNRNP48	94	63.787	ENSMUSG00000021431	Snrnp48	84	63.787	Mus_musculus
ENSPSIG00000002213	SNRNP48	94	63.787	MGP_PahariEiJ_G0019509	Snrnp48	84	63.787	Mus_pahari
ENSPSIG00000002213	SNRNP48	94	64.120	MGP_SPRETEiJ_G0019321	Snrnp48	84	64.120	Mus_spretus
ENSPSIG00000002213	SNRNP48	94	61.538	ENSNGAG00000004849	Snrnp48	84	61.462	Nannospalax_galili
ENSPSIG00000002213	SNRNP48	64	53.659	ENSNBRG00000012127	snrnp48	84	45.302	Neolamprologus_brichardi
ENSPSIG00000002213	SNRNP48	92	62.116	ENSNLEG00000011667	SNRNP48	87	61.613	Nomascus_leucogenys
ENSPSIG00000002213	SNRNP48	90	59.155	ENSOPRG00000015471	SNRNP48	84	59.507	Ochotona_princeps
ENSPSIG00000002213	SNRNP48	91	46.048	ENSONIG00000001520	snrnp48	84	44.966	Oreochromis_niloticus
ENSPSIG00000002213	SNRNP48	79	64.800	ENSOCUG00000005168	SNRNP48	83	63.806	Oryctolagus_cuniculus
ENSPSIG00000002213	SNRNP48	76	51.429	ENSORLG00000015654	snrnp48	80	48.148	Oryzias_latipes
ENSPSIG00000002213	SNRNP48	76	51.020	ENSORLG00020015976	snrnp48	69	47.475	Oryzias_latipes_hni
ENSPSIG00000002213	SNRNP48	76	51.837	ENSORLG00015022379	snrnp48	69	47.811	Oryzias_latipes_hsok
ENSPSIG00000002213	SNRNP48	76	52.245	ENSOMEG00000022007	snrnp48	80	48.355	Oryzias_melastigma
ENSPSIG00000002213	SNRNP48	88	62.057	ENSOGAG00000005275	SNRNP48	84	60.751	Otolemur_garnettii
ENSPSIG00000002213	SNRNP48	94	63.787	ENSOARG00000017319	SNRNP48	99	63.787	Ovis_aries
ENSPSIG00000002213	SNRNP48	92	62.116	ENSPPAG00000032873	SNRNP48	87	61.613	Pan_paniscus
ENSPSIG00000002213	SNRNP48	97	62.658	ENSPPRG00000004283	SNRNP48	88	62.658	Panthera_pardus
ENSPSIG00000002213	SNRNP48	93	64.310	ENSPTIG00000013502	SNRNP48	98	64.310	Panthera_tigris_altaica
ENSPSIG00000002213	SNRNP48	92	62.116	ENSPTRG00000017703	SNRNP48	87	61.613	Pan_troglodytes
ENSPSIG00000002213	SNRNP48	92	62.116	ENSPANG00000000771	SNRNP48	87	61.613	Papio_anubis
ENSPSIG00000002213	SNRNP48	90	48.966	ENSPKIG00000013703	snrnp48	60	49.310	Paramormyrops_kingsleyae
ENSPSIG00000002213	SNRNP48	66	51.659	ENSPMGG00000008120	snrnp48	73	51.659	Periophthalmus_magnuspinnatus
ENSPSIG00000002213	SNRNP48	97	63.057	ENSPEMG00000008872	Snrnp48	88	62.975	Peromyscus_maniculatus_bairdii
ENSPSIG00000002213	SNRNP48	64	54.589	ENSPFOG00000003578	snrnp48	77	47.312	Poecilia_formosa
ENSPSIG00000002213	SNRNP48	58	53.476	ENSPLAG00000002290	snrnp48	63	53.476	Poecilia_latipinna
ENSPSIG00000002213	SNRNP48	64	55.556	ENSPMEG00000018033	snrnp48	77	48.029	Poecilia_mexicana
ENSPSIG00000002213	SNRNP48	63	55.392	ENSPREG00000018541	snrnp48	77	49.104	Poecilia_reticulata
ENSPSIG00000002213	SNRNP48	92	61.092	ENSPPYG00000016209	SNRNP48	87	60.645	Pongo_abelii
ENSPSIG00000002213	SNRNP48	64	55.392	ENSPCAG00000011991	SNRNP48	78	54.286	Procavia_capensis
ENSPSIG00000002213	SNRNP48	92	64.505	ENSPVAG00000002854	SNRNP48	88	62.342	Pteropus_vampyrus
ENSPSIG00000002213	SNRNP48	64	53.659	ENSPNYG00000015399	snrnp48	82	45.775	Pundamilia_nyererei
ENSPSIG00000002213	SNRNP48	94	63.211	ENSRNOG00000013756	Snrnp48	84	63.123	Rattus_norvegicus
ENSPSIG00000002213	SNRNP48	85	62.731	ENSRBIG00000043856	SNRNP48	86	62.153	Rhinopithecus_bieti
ENSPSIG00000002213	SNRNP48	92	61.775	ENSRROG00000043229	SNRNP48	87	61.290	Rhinopithecus_roxellana
ENSPSIG00000002213	SNRNP48	92	62.799	ENSSBOG00000019486	SNRNP48	87	61.935	Saimiri_boliviensis_boliviensis
ENSPSIG00000002213	SNRNP48	94	70.667	ENSSHAG00000014483	SNRNP48	85	69.231	Sarcophilus_harrisii
ENSPSIG00000002213	SNRNP48	70	54.260	ENSSFOG00015006610	snrnp48	68	48.701	Scleropages_formosus
ENSPSIG00000002213	SNRNP48	76	51.852	ENSSDUG00000014953	snrnp48	77	48.387	Seriola_dumerili
ENSPSIG00000002213	SNRNP48	76	52.263	ENSSLDG00000005989	snrnp48	77	48.746	Seriola_lalandi_dorsalis
ENSPSIG00000002213	SNRNP48	94	76.667	ENSSPUG00000006257	SNRNP48	85	76.667	Sphenodon_punctatus
ENSPSIG00000002213	SNRNP48	74	50.211	ENSSPAG00000006454	snrnp48	80	46.512	Stegastes_partitus
ENSPSIG00000002213	SNRNP48	94	75.758	ENSTGUG00000007575	SNRNP48	93	74.411	Taeniopygia_guttata
ENSPSIG00000002213	SNRNP48	63	54.680	ENSTRUG00000007031	snrnp48	84	45.608	Takifugu_rubripes
ENSPSIG00000002213	SNRNP48	65	49.761	ENSTNIG00000012977	-	74	43.056	Tetraodon_nigroviridis
ENSPSIG00000002213	SNRNP48	69	66.667	ENSTBEG00000015620	SNRNP48	66	66.667	Tupaia_belangeri
ENSPSIG00000002213	SNRNP48	92	63.481	ENSTTRG00000016715	SNRNP48	84	63.455	Tursiops_truncatus
ENSPSIG00000002213	SNRNP48	94	62.092	ENSUAMG00000003690	SNRNP48	88	61.392	Ursus_americanus
ENSPSIG00000002213	SNRNP48	94	62.626	ENSVPAG00000003557	SNRNP48	99	62.207	Vicugna_pacos
ENSPSIG00000002213	SNRNP48	97	61.392	ENSVVUG00000004996	SNRNP48	88	61.392	Vulpes_vulpes
ENSPSIG00000002213	SNRNP48	85	59.259	ENSXETG00000020447	snrnp48	86	56.436	Xenopus_tropicalis
ENSPSIG00000002213	SNRNP48	58	56.383	ENSXCOG00000004478	snrnp48	82	43.945	Xiphophorus_couchianus
ENSPSIG00000002213	SNRNP48	64	57.005	ENSXMAG00000013595	snrnp48	77	49.462	Xiphophorus_maculatus