EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000002265 (Gene tree)
Gene ID: 102450943
Gene Symbol: SSB
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 57134 bases
Position: chrJH207376.1:193972-251105
Accession: 102450943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002282	RRM_1	PF00076.22	9.8e-13	1	1
ENSPSIP00000002282	RRM_3	PF08777.11	8.5e-28	1	1
ENSPSIP00000002282	La	PF05383.17	2.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002289	SSB-201	1385	XM_006118194	ENSPSIP00000002282	438 (aa)	XP_006118256	K7F2M2

Gene Model

Click here to download ENSPSIG00000002265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002265	SSB	93	75.795	ENSG00000138385	SSB	100	79.167	Homo_sapiens
ENSPSIG00000002265	SSB	93	57.073	ENSAPOG00000003448	ssb	100	56.829	Acanthochromis_polyacanthus
ENSPSIG00000002265	SSB	93	73.349	ENSAMEG00000010507	SSB	100	71.698	Ailuropoda_melanoleuca
ENSPSIG00000002265	SSB	85	60.160	ENSACIG00000001738	ssb	95	60.383	Amphilophus_citrinellus
ENSPSIG00000002265	SSB	93	56.829	ENSAOCG00000020398	ssb	100	56.585	Amphiprion_ocellaris
ENSPSIG00000002265	SSB	93	57.073	ENSAPEG00000020395	ssb	100	56.829	Amphiprion_percula
ENSPSIG00000002265	SSB	93	60.976	ENSATEG00000016884	ssb	100	60.488	Anabas_testudineus
ENSPSIG00000002265	SSB	93	80.841	ENSAPLG00000006109	SSB	100	79.157	Anas_platyrhynchos
ENSPSIG00000002265	SSB	93	71.220	ENSACAG00000017008	SSB	99	70.732	Anolis_carolinensis
ENSPSIG00000002265	SSB	93	67.237	ENSANAG00000027195	-	100	66.015	Aotus_nancymaae
ENSPSIG00000002265	SSB	93	56.863	ENSACLG00000010798	ssb	100	56.127	Astatotilapia_calliptera
ENSPSIG00000002265	SSB	92	57.946	ENSAMXG00000012606	ssb	100	58.596	Astyanax_mexicanus
ENSPSIG00000002265	SSB	93	76.773	ENSBTAG00000008716	SSB	100	76.773	Bos_taurus
ENSPSIG00000002265	SSB	68	37.500	WBGene00016653	C44E4.4	76	38.158	Caenorhabditis_elegans
ENSPSIG00000002265	SSB	93	75.795	ENSCJAG00000045073	SSB	100	75.061	Callithrix_jacchus
ENSPSIG00000002265	SSB	93	76.098	ENSCAFG00000012418	SSB	100	75.366	Canis_familiaris
ENSPSIG00000002265	SSB	93	76.098	ENSCAFG00020002900	SSB	100	75.366	Canis_lupus_dingo
ENSPSIG00000002265	SSB	93	72.127	ENSCHIG00000022196	-	100	71.638	Capra_hircus
ENSPSIG00000002265	SSB	93	76.528	ENSCHIG00000022624	-	100	76.284	Capra_hircus
ENSPSIG00000002265	SSB	93	75.306	ENSTSYG00000000097	SSB	100	75.061	Carlito_syrichta
ENSPSIG00000002265	SSB	93	77.017	ENSCPOG00000003338	SSB	100	76.528	Cavia_porcellus
ENSPSIG00000002265	SSB	93	76.528	ENSCCAG00000035147	SSB	100	75.306	Cebus_capucinus
ENSPSIG00000002265	SSB	93	56.724	ENSCATG00000042909	-	100	52.683	Cercocebus_atys
ENSPSIG00000002265	SSB	93	58.795	ENSCATG00000036701	SSB	100	57.908	Cercocebus_atys
ENSPSIG00000002265	SSB	93	76.528	ENSCLAG00000015617	-	100	75.550	Chinchilla_lanigera
ENSPSIG00000002265	SSB	92	69.327	ENSCSAG00000018390	-	100	68.828	Chlorocebus_sabaeus
ENSPSIG00000002265	SSB	94	75.545	ENSCSAG00000015200	SSB	90	74.818	Chlorocebus_sabaeus
ENSPSIG00000002265	SSB	93	77.262	ENSCHOG00000007763	SSB	100	76.528	Choloepus_hoffmanni
ENSPSIG00000002265	SSB	93	93.643	ENSCPBG00000006519	SSB	100	93.643	Chrysemys_picta_bellii
ENSPSIG00000002265	SSB	93	66.259	ENSCANG00000033240	-	100	65.770	Colobus_angolensis_palliatus
ENSPSIG00000002265	SSB	89	59.542	ENSCANG00000028838	-	93	54.592	Colobus_angolensis_palliatus
ENSPSIG00000002265	SSB	93	75.795	ENSCANG00000027695	SSB	100	75.061	Colobus_angolensis_palliatus
ENSPSIG00000002265	SSB	93	66.425	ENSCGRG00001024831	Ssb	100	67.391	Cricetulus_griseus_chok1gshd
ENSPSIG00000002265	SSB	93	66.425	ENSCGRG00000005387	Ssb	100	67.391	Cricetulus_griseus_crigri
ENSPSIG00000002265	SSB	91	57.320	ENSCSEG00000011599	ssb	99	56.328	Cynoglossus_semilaevis
ENSPSIG00000002265	SSB	93	58.394	ENSCVAG00000021558	ssb	100	58.881	Cyprinodon_variegatus
ENSPSIG00000002265	SSB	93	60.976	ENSDARG00000029252	ssb	100	60.488	Danio_rerio
ENSPSIG00000002265	SSB	93	77.506	ENSDNOG00000013450	SSB	100	76.528	Dasypus_novemcinctus
ENSPSIG00000002265	SSB	93	69.880	ENSDORG00000005543	Ssb	100	67.229	Dipodomys_ordii
ENSPSIG00000002265	SSB	75	34.503	FBgn0011638	La	75	35.161	Drosophila_melanogaster
ENSPSIG00000002265	SSB	81	50.559	ENSEBUG00000001237	ssb	91	49.014	Eptatretus_burgeri
ENSPSIG00000002265	SSB	93	77.017	ENSEASG00005022835	SSB	100	77.017	Equus_asinus_asinus
ENSPSIG00000002265	SSB	93	77.262	ENSECAG00000018495	SSB	100	77.262	Equus_caballus
ENSPSIG00000002265	SSB	70	62.092	ENSEEUG00000008077	SSB	78	59.477	Erinaceus_europaeus
ENSPSIG00000002265	SSB	93	62.836	ENSELUG00000020929	ssb	100	62.836	Esox_lucius
ENSPSIG00000002265	SSB	93	76.098	ENSFCAG00000011601	SSB	100	75.122	Felis_catus
ENSPSIG00000002265	SSB	93	83.619	ENSFALG00000000930	SSB	100	83.374	Ficedula_albicollis
ENSPSIG00000002265	SSB	93	77.017	ENSFDAG00000000598	SSB	100	76.039	Fukomys_damarensis
ENSPSIG00000002265	SSB	67	58.000	ENSFHEG00000003268	ssb	92	57.047	Fundulus_heteroclitus
ENSPSIG00000002265	SSB	91	56.618	ENSGMOG00000002664	ssb	100	55.037	Gadus_morhua
ENSPSIG00000002265	SSB	93	83.863	ENSGALG00000009677	SSB	100	82.885	Gallus_gallus
ENSPSIG00000002265	SSB	93	58.293	ENSGAFG00000002749	ssb	100	58.293	Gambusia_affinis
ENSPSIG00000002265	SSB	91	57.213	ENSGACG00000005107	ssb	99	56.479	Gasterosteus_aculeatus
ENSPSIG00000002265	SSB	93	92.421	ENSGAGG00000007807	SSB	100	92.421	Gopherus_agassizii
ENSPSIG00000002265	SSB	52	73.451	ENSGGOG00000023471	-	95	71.245	Gorilla_gorilla
ENSPSIG00000002265	SSB	93	63.325	ENSGGOG00000024891	-	100	62.836	Gorilla_gorilla
ENSPSIG00000002265	SSB	93	56.863	ENSHBUG00000006584	ssb	100	56.127	Haplochromis_burtoni
ENSPSIG00000002265	SSB	93	75.481	ENSHGLG00000017580	-	100	73.558	Heterocephalus_glaber_female
ENSPSIG00000002265	SSB	93	68.460	ENSHGLG00000005832	-	100	66.748	Heterocephalus_glaber_female
ENSPSIG00000002265	SSB	93	71.046	ENSHGLG00000004478	-	100	69.343	Heterocephalus_glaber_female
ENSPSIG00000002265	SSB	93	67.237	ENSHGLG00100008767	-	100	67.237	Heterocephalus_glaber_male
ENSPSIG00000002265	SSB	93	75.481	ENSHGLG00100003084	-	100	73.558	Heterocephalus_glaber_male
ENSPSIG00000002265	SSB	91	56.858	ENSHCOG00000019011	ssb	99	58.354	Hippocampus_comes
ENSPSIG00000002265	SSB	93	61.017	ENSIPUG00000003681	SSB	100	60.680	Ictalurus_punctatus
ENSPSIG00000002265	SSB	93	76.284	ENSSTOG00000008416	SSB	100	76.039	Ictidomys_tridecemlineatus
ENSPSIG00000002265	SSB	93	54.433	ENSJJAG00000016250	-	99	52.463	Jaculus_jaculus
ENSPSIG00000002265	SSB	93	64.403	ENSJJAG00000023158	-	100	62.529	Jaculus_jaculus
ENSPSIG00000002265	SSB	93	57.805	ENSKMAG00000017317	ssb	99	57.072	Kryptolebias_marmoratus
ENSPSIG00000002265	SSB	93	58.537	ENSLBEG00000017345	ssb	100	58.780	Labrus_bergylta
ENSPSIG00000002265	SSB	93	67.157	ENSLACG00000014056	SSB	99	67.402	Latimeria_chalumnae
ENSPSIG00000002265	SSB	91	70.574	ENSLOCG00000007933	ssb	98	70.471	Lepisosteus_oculatus
ENSPSIG00000002265	SSB	93	64.059	ENSLAFG00000028909	-	100	63.814	Loxodonta_africana
ENSPSIG00000002265	SSB	93	71.765	ENSLAFG00000000867	-	100	70.892	Loxodonta_africana
ENSPSIG00000002265	SSB	69	59.272	ENSLAFG00000026721	-	99	58.940	Loxodonta_africana
ENSPSIG00000002265	SSB	82	67.507	ENSMFAG00000041478	-	91	68.085	Macaca_fascicularis
ENSPSIG00000002265	SSB	93	75.795	ENSMFAG00000039066	SSB	100	75.061	Macaca_fascicularis
ENSPSIG00000002265	SSB	93	75.795	ENSMMUG00000023051	SSB	100	75.061	Macaca_mulatta
ENSPSIG00000002265	SSB	93	65.526	ENSMMUG00000011724	-	97	59.809	Macaca_mulatta
ENSPSIG00000002265	SSB	93	54.545	ENSMMUG00000039889	-	100	53.071	Macaca_mulatta
ENSPSIG00000002265	SSB	82	67.507	ENSMNEG00000034698	-	91	68.085	Macaca_nemestrina
ENSPSIG00000002265	SSB	93	65.610	ENSMNEG00000028321	SSB	100	65.610	Macaca_nemestrina
ENSPSIG00000002265	SSB	93	54.523	ENSMLEG00000042644	-	100	51.589	Mandrillus_leucophaeus
ENSPSIG00000002265	SSB	93	75.795	ENSMLEG00000035717	SSB	100	75.061	Mandrillus_leucophaeus
ENSPSIG00000002265	SSB	93	60.244	ENSMAMG00000004800	ssb	100	59.512	Mastacembelus_armatus
ENSPSIG00000002265	SSB	93	56.863	ENSMZEG00005005749	ssb	100	56.127	Maylandia_zebra
ENSPSIG00000002265	SSB	93	83.863	ENSMGAG00000010328	SSB	100	83.374	Meleagris_gallopavo
ENSPSIG00000002265	SSB	92	70.324	ENSMICG00000033304	-	93	72.253	Microcebus_murinus
ENSPSIG00000002265	SSB	93	77.150	ENSMICG00000028252	-	99	76.413	Microcebus_murinus
ENSPSIG00000002265	SSB	93	62.103	ENSMODG00000019271	-	100	61.614	Monodelphis_domestica
ENSPSIG00000002265	SSB	93	72.792	ENSMODG00000008227	-	100	72.554	Monodelphis_domestica
ENSPSIG00000002265	SSB	93	59.658	ENSMODG00000007027	-	100	59.169	Monodelphis_domestica
ENSPSIG00000002265	SSB	83	60.490	ENSMALG00000008045	ssb	87	61.111	Monopterus_albus
ENSPSIG00000002265	SSB	93	65.176	MGP_CAROLIEiJ_G0023629	-	100	75.543	Mus_caroli
ENSPSIG00000002265	SSB	93	64.706	ENSMUSG00000068882	Ssb	100	75.543	Mus_musculus
ENSPSIG00000002265	SSB	93	64.706	MGP_PahariEiJ_G0025081	-	100	75.000	Mus_pahari
ENSPSIG00000002265	SSB	93	64.706	MGP_SPRETEiJ_G0024551	Ssb	100	75.543	Mus_spretus
ENSPSIG00000002265	SSB	93	76.284	ENSMPUG00000000785	SSB	100	75.795	Mustela_putorius_furo
ENSPSIG00000002265	SSB	93	71.934	ENSMLUG00000016316	SSB	100	70.991	Myotis_lucifugus
ENSPSIG00000002265	SSB	93	56.863	ENSNBRG00000012661	ssb	100	56.863	Neolamprologus_brichardi
ENSPSIG00000002265	SSB	93	55.746	ENSNLEG00000028754	-	100	54.390	Nomascus_leucogenys
ENSPSIG00000002265	SSB	93	75.795	ENSNLEG00000004958	SSB	100	75.061	Nomascus_leucogenys
ENSPSIG00000002265	SSB	57	81.452	ENSMEUG00000001650	-	100	81.452	Notamacropus_eugenii
ENSPSIG00000002265	SSB	87	73.228	ENSODEG00000004202	-	99	72.441	Octodon_degus
ENSPSIG00000002265	SSB	93	57.598	ENSONIG00000008776	ssb	100	56.618	Oreochromis_niloticus
ENSPSIG00000002265	SSB	93	78.102	ENSOANG00000008543	SSB	100	77.506	Ornithorhynchus_anatinus
ENSPSIG00000002265	SSB	93	76.284	ENSOCUG00000010396	SSB	100	76.039	Oryctolagus_cuniculus
ENSPSIG00000002265	SSB	93	59.268	ENSORLG00000017208	ssb	100	59.268	Oryzias_latipes
ENSPSIG00000002265	SSB	93	59.268	ENSORLG00020022574	ssb	100	59.268	Oryzias_latipes_hni
ENSPSIG00000002265	SSB	93	59.268	ENSORLG00015016592	ssb	100	58.780	Oryzias_latipes_hsok
ENSPSIG00000002265	SSB	93	60.880	ENSOMEG00000003193	ssb	100	61.125	Oryzias_melastigma
ENSPSIG00000002265	SSB	93	71.831	ENSOGAG00000029768	SSB	100	69.953	Otolemur_garnettii
ENSPSIG00000002265	SSB	93	76.773	ENSOARG00000002906	SSB	100	76.528	Ovis_aries
ENSPSIG00000002265	SSB	83	62.155	ENSPPAG00000006189	-	93	57.692	Pan_paniscus
ENSPSIG00000002265	SSB	93	75.795	ENSPPAG00000042673	SSB	100	75.795	Pan_paniscus
ENSPSIG00000002265	SSB	93	62.592	ENSPPAG00000032427	-	100	71.318	Pan_paniscus
ENSPSIG00000002265	SSB	93	76.098	ENSPPRG00000006599	SSB	100	75.122	Panthera_pardus
ENSPSIG00000002265	SSB	94	75.845	ENSPTIG00000011021	SSB	98	74.879	Panthera_tigris_altaica
ENSPSIG00000002265	SSB	93	75.795	ENSPTRG00000012620	SSB	100	75.795	Pan_troglodytes
ENSPSIG00000002265	SSB	93	59.413	ENSPTRG00000042880	-	100	56.691	Pan_troglodytes
ENSPSIG00000002265	SSB	93	55.746	ENSPANG00000034126	-	100	51.659	Papio_anubis
ENSPSIG00000002265	SSB	93	75.795	ENSPANG00000007440	SSB	100	75.061	Papio_anubis
ENSPSIG00000002265	SSB	92	52.854	ENSPANG00000031877	-	95	51.861	Papio_anubis
ENSPSIG00000002265	SSB	93	65.037	ENSPKIG00000019325	ssb	99	65.037	Paramormyrops_kingsleyae
ENSPSIG00000002265	SSB	80	55.307	ENSPMGG00000020075	ssb	90	55.908	Periophthalmus_magnuspinnatus
ENSPSIG00000002265	SSB	92	47.319	ENSPMAG00000002982	ssb	100	46.154	Petromyzon_marinus
ENSPSIG00000002265	SSB	93	75.610	ENSPCIG00000028591	-	100	76.098	Phascolarctos_cinereus
ENSPSIG00000002265	SSB	93	58.780	ENSPFOG00000009650	ssb	100	58.293	Poecilia_formosa
ENSPSIG00000002265	SSB	93	58.537	ENSPLAG00000020498	ssb	100	58.293	Poecilia_latipinna
ENSPSIG00000002265	SSB	93	58.537	ENSPMEG00000001051	ssb	100	58.049	Poecilia_mexicana
ENSPSIG00000002265	SSB	85	60.526	ENSPREG00000003708	ssb	96	60.870	Poecilia_reticulata
ENSPSIG00000002265	SSB	93	75.795	ENSPPYG00000012919	SSB	100	75.061	Pongo_abelii
ENSPSIG00000002265	SSB	88	73.902	ENSPCAG00000010276	SSB	100	72.868	Procavia_capensis
ENSPSIG00000002265	SSB	93	73.594	ENSPCOG00000015741	-	100	72.372	Propithecus_coquereli
ENSPSIG00000002265	SSB	93	67.482	ENSPCOG00000023189	-	100	67.237	Propithecus_coquereli
ENSPSIG00000002265	SSB	81	77.904	ENSPVAG00000006615	SSB	97	78.947	Pteropus_vampyrus
ENSPSIG00000002265	SSB	93	56.863	ENSPNYG00000006444	ssb	100	56.127	Pundamilia_nyererei
ENSPSIG00000002265	SSB	92	59.360	ENSPNAG00000011708	ssb	100	59.512	Pygocentrus_nattereri
ENSPSIG00000002265	SSB	93	64.471	ENSRNOG00000007998	Ssb	100	63.529	Rattus_norvegicus
ENSPSIG00000002265	SSB	93	65.049	ENSRNOG00000011606	AABR07061825.1	100	64.320	Rattus_norvegicus
ENSPSIG00000002265	SSB	93	64.251	ENSRBIG00000041972	SSB	88	79.130	Rhinopithecus_bieti
ENSPSIG00000002265	SSB	83	68.852	ENSRBIG00000041608	-	97	66.758	Rhinopithecus_bieti
ENSPSIG00000002265	SSB	93	56.585	ENSRBIG00000029918	-	100	52.078	Rhinopithecus_bieti
ENSPSIG00000002265	SSB	87	64.752	ENSRBIG00000041232	-	98	64.230	Rhinopithecus_bieti
ENSPSIG00000002265	SSB	93	62.927	ENSRROG00000007149	-	100	58.191	Rhinopithecus_roxellana
ENSPSIG00000002265	SSB	93	75.795	ENSRROG00000040346	SSB	100	75.061	Rhinopithecus_roxellana
ENSPSIG00000002265	SSB	83	72.404	ENSRROG00000034102	-	98	67.164	Rhinopithecus_roxellana
ENSPSIG00000002265	SSB	91	65.500	ENSRROG00000031684	-	100	65.000	Rhinopithecus_roxellana
ENSPSIG00000002265	SSB	93	76.039	ENSSBOG00000027204	SSB	100	75.306	Saimiri_boliviensis_boliviensis
ENSPSIG00000002265	SSB	93	75.366	ENSSHAG00000018062	SSB	100	76.341	Sarcophilus_harrisii
ENSPSIG00000002265	SSB	93	66.344	ENSSFOG00015000550	ssb	100	66.586	Scleropages_formosus
ENSPSIG00000002265	SSB	92	54.342	ENSSMAG00000013885	ssb	98	59.350	Scophthalmus_maximus
ENSPSIG00000002265	SSB	93	59.268	ENSSDUG00000020117	ssb	100	58.537	Seriola_dumerili
ENSPSIG00000002265	SSB	93	56.757	ENSSLDG00000002525	ssb	100	54.988	Seriola_lalandi_dorsalis
ENSPSIG00000002265	SSB	88	70.026	ENSSARG00000007747	SSB	100	69.251	Sorex_araneus
ENSPSIG00000002265	SSB	93	85.086	ENSSPUG00000012112	SSB	100	84.841	Sphenodon_punctatus
ENSPSIG00000002265	SSB	92	57.143	ENSSPAG00000005696	ssb	100	57.073	Stegastes_partitus
ENSPSIG00000002265	SSB	92	65.337	ENSSSCG00000015938	SSB	98	64.339	Sus_scrofa
ENSPSIG00000002265	SSB	93	83.374	ENSTGUG00000007942	SSB	100	83.374	Taeniopygia_guttata
ENSPSIG00000002265	SSB	93	58.824	ENSTRUG00000017839	ssb	100	56.204	Takifugu_rubripes
ENSPSIG00000002265	SSB	84	60.870	ENSTNIG00000000915	ssb	99	59.249	Tetraodon_nigroviridis
ENSPSIG00000002265	SSB	77	79.130	ENSTBEG00000009056	SSB	82	79.130	Tupaia_belangeri
ENSPSIG00000002265	SSB	93	76.585	ENSTTRG00000002152	SSB	100	74.634	Tursiops_truncatus
ENSPSIG00000002265	SSB	86	77.778	ENSUAMG00000027833	SSB	96	79.121	Ursus_americanus
ENSPSIG00000002265	SSB	93	76.341	ENSUMAG00000013907	SSB	100	75.610	Ursus_maritimus
ENSPSIG00000002265	SSB	93	76.773	ENSVPAG00000007183	SSB	100	76.528	Vicugna_pacos
ENSPSIG00000002265	SSB	94	76.087	ENSVVUG00000016573	SSB	80	73.148	Vulpes_vulpes
ENSPSIG00000002265	SSB	93	59.579	ENSXETG00000025402	ssb	100	59.346	Xenopus_tropicalis
ENSPSIG00000002265	SSB	85	58.575	ENSXCOG00000019109	ssb	93	66.406	Xiphophorus_couchianus
ENSPSIG00000002265	SSB	93	58.780	ENSXMAG00000004888	ssb	100	58.537	Xiphophorus_maculatus