EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000002361 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 11835 bases
Position: chrJH205651.1:1260830-1272664
Accession: 102447130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002394	RRM_1	PF00076.22	3.6e-62	1	4
ENSPSIP00000002394	RRM_1	PF00076.22	3.6e-62	2	4
ENSPSIP00000002394	RRM_1	PF00076.22	3.6e-62	3	4
ENSPSIP00000002394	RRM_1	PF00076.22	3.6e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002402	-	2537	XM_006112382	ENSPSIP00000002394	712 (aa)	-	K7F2Y4

Gene Model

Click here to download ENSPSIG00000002361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002361	-	54	61.458	ENSAPOG00000023888	ncl	65	56.795	Acanthochromis_polyacanthus
ENSPSIG00000002361	-	60	39.091	ENSAPOG00000014534	-	67	40.000	Acanthochromis_polyacanthus
ENSPSIG00000002361	-	53	60.574	ENSACIG00000013234	ncl	80	59.413	Amphilophus_citrinellus
ENSPSIG00000002361	-	54	61.458	ENSAOCG00000003133	ncl	66	57.606	Amphiprion_ocellaris
ENSPSIG00000002361	-	57	38.679	ENSAOCG00000014792	-	61	39.440	Amphiprion_ocellaris
ENSPSIG00000002361	-	57	38.443	ENSAPEG00000013612	-	60	39.186	Amphiprion_percula
ENSPSIG00000002361	-	54	61.458	ENSAPEG00000002769	ncl	65	57.260	Amphiprion_percula
ENSPSIG00000002361	-	71	39.205	ENSATEG00000019862	-	75	44.444	Anabas_testudineus
ENSPSIG00000002361	-	54	61.979	ENSATEG00000013343	ncl	53	62.338	Anabas_testudineus
ENSPSIG00000002361	-	63	69.214	ENSAPLG00000012897	-	95	64.452	Anas_platyrhynchos
ENSPSIG00000002361	-	82	63.333	ENSACAG00000001006	-	81	63.500	Anolis_carolinensis
ENSPSIG00000002361	-	53	62.102	ENSACLG00000026031	ncl	86	61.465	Astatotilapia_calliptera
ENSPSIG00000002361	-	51	49.167	ENSCHIG00000012665	-	64	48.539	Capra_hircus
ENSPSIG00000002361	-	92	78.756	ENSCPBG00000016444	-	90	78.604	Chrysemys_picta_bellii
ENSPSIG00000002361	-	54	61.458	ENSCSEG00000015089	ncl	70	58.599	Cynoglossus_semilaevis
ENSPSIG00000002361	-	54	61.299	ENSCVAG00000012600	ncl	55	61.183	Cyprinodon_variegatus
ENSPSIG00000002361	-	54	64.038	ENSDARG00000002710	ncl	81	64.151	Danio_rerio
ENSPSIG00000002361	-	56	50.868	ENSDNOG00000031611	-	68	52.196	Dasypus_novemcinctus
ENSPSIG00000002361	-	51	53.388	ENSDNOG00000040257	-	61	53.226	Dasypus_novemcinctus
ENSPSIG00000002361	-	55	47.959	ENSELUG00000022826	-	81	48.062	Esox_lucius
ENSPSIG00000002361	-	54	59.021	ENSFHEG00000018000	ncl	60	60.734	Fundulus_heteroclitus
ENSPSIG00000002361	-	54	75.696	ENSGALG00000032930	NCL	91	65.913	Gallus_gallus
ENSPSIG00000002361	-	56	57.215	ENSGACG00000008970	ncl	61	57.922	Gasterosteus_aculeatus
ENSPSIG00000002361	-	92	76.435	ENSGAGG00000013330	-	90	76.702	Gopherus_agassizii
ENSPSIG00000002361	-	53	60.313	ENSHBUG00000006869	ncl	54	60.000	Haplochromis_burtoni
ENSPSIG00000002361	-	54	60.156	ENSHCOG00000010234	ncl	52	60.260	Hippocampus_comes
ENSPSIG00000002361	-	54	63.462	ENSIPUG00000024556	ncl	81	63.924	Ictalurus_punctatus
ENSPSIG00000002361	-	52	41.099	ENSLBEG00000014278	-	82	41.033	Labrus_bergylta
ENSPSIG00000002361	-	52	41.361	ENSLBEG00000007915	-	68	40.394	Labrus_bergylta
ENSPSIG00000002361	-	66	50.244	ENSLACG00000022167	-	86	51.680	Latimeria_chalumnae
ENSPSIG00000002361	-	50	62.155	ENSLOCG00000004828	ncl	58	58.705	Lepisosteus_oculatus
ENSPSIG00000002361	-	53	39.130	ENSMAMG00000003479	-	65	39.011	Mastacembelus_armatus
ENSPSIG00000002361	-	53	60.677	ENSMZEG00005017438	ncl	66	55.306	Maylandia_zebra
ENSPSIG00000002361	-	53	75.397	ENSMGAG00000008147	-	87	75.397	Meleagris_gallopavo
ENSPSIG00000002361	-	54	63.141	ENSMMOG00000008553	ncl	85	63.259	Mola_mola
ENSPSIG00000002361	-	54	68.299	ENSMODG00000002470	-	55	68.112	Monodelphis_domestica
ENSPSIG00000002361	-	60	50.588	ENSMPUG00000001663	-	66	48.910	Mustela_putorius_furo
ENSPSIG00000002361	-	50	63.542	ENSNBRG00000000146	-	87	63.668	Neolamprologus_brichardi
ENSPSIG00000002361	-	50	63.542	ENSNBRG00000001232	ncl	83	63.668	Neolamprologus_brichardi
ENSPSIG00000002361	-	62	66.741	ENSMEUG00000012335	-	64	66.964	Notamacropus_eugenii
ENSPSIG00000002361	-	55	37.056	ENSONIG00000010631	-	98	36.829	Oreochromis_niloticus
ENSPSIG00000002361	-	53	60.313	ENSONIG00000012508	ncl	54	60.000	Oreochromis_niloticus
ENSPSIG00000002361	-	78	58.843	ENSOANG00000008732	-	69	68.090	Ornithorhynchus_anatinus
ENSPSIG00000002361	-	57	31.840	ENSORLG00000004645	-	85	32.518	Oryzias_latipes
ENSPSIG00000002361	-	50	60.665	ENSORLG00000007055	ncl	52	58.974	Oryzias_latipes
ENSPSIG00000002361	-	54	33.671	ENSORLG00020003497	-	71	34.677	Oryzias_latipes_hni
ENSPSIG00000002361	-	53	34.109	ENSORLG00015006613	-	74	34.853	Oryzias_latipes_hsok
ENSPSIG00000002361	-	63	54.000	ENSORLG00015013815	ncl	89	62.300	Oryzias_latipes_hsok
ENSPSIG00000002361	-	58	33.568	ENSOMEG00000015864	-	84	34.165	Oryzias_melastigma
ENSPSIG00000002361	-	53	59.269	ENSOMEG00000020786	ncl	50	59.896	Oryzias_melastigma
ENSPSIG00000002361	-	55	62.821	ENSPMGG00000004709	ncl	80	62.939	Periophthalmus_magnuspinnatus
ENSPSIG00000002361	-	58	66.746	ENSPCIG00000003293	-	72	63.636	Phascolarctos_cinereus
ENSPSIG00000002361	-	53	60.677	ENSPNYG00000020494	ncl	54	59.744	Pundamilia_nyererei
ENSPSIG00000002361	-	56	65.267	ENSSHAG00000007489	-	99	54.927	Sarcophilus_harrisii
ENSPSIG00000002361	-	54	64.583	ENSSFOG00015008583	ncl	58	64.583	Scleropages_formosus
ENSPSIG00000002361	-	72	36.096	ENSSMAG00000007582	-	63	40.887	Scophthalmus_maximus
ENSPSIG00000002361	-	54	59.635	ENSSMAG00000021241	ncl	54	59.740	Scophthalmus_maximus
ENSPSIG00000002361	-	56	40.426	ENSSDUG00000010922	-	72	40.295	Seriola_dumerili
ENSPSIG00000002361	-	55	61.979	ENSSDUG00000006128	ncl	89	62.078	Seriola_dumerili
ENSPSIG00000002361	-	51	41.039	ENSSLDG00000015784	-	61	40.921	Seriola_lalandi_dorsalis
ENSPSIG00000002361	-	54	61.198	ENSSLDG00000002012	ncl	53	61.818	Seriola_lalandi_dorsalis
ENSPSIG00000002361	-	75	67.568	ENSSPUG00000008244	-	66	70.664	Sphenodon_punctatus
ENSPSIG00000002361	-	52	65.278	ENSSPAG00000002637	ncl	84	65.744	Stegastes_partitus
ENSPSIG00000002361	-	58	41.232	ENSSPAG00000001859	-	62	41.071	Stegastes_partitus
ENSPSIG00000002361	-	63	69.778	ENSTGUG00000009782	-	77	68.337	Taeniopygia_guttata
ENSPSIG00000002361	-	64	60.811	ENSTRUG00000008185	ncl	55	60.733	Takifugu_rubripes
ENSPSIG00000002361	-	54	34.091	ENSXCOG00000007369	-	86	35.912	Xiphophorus_couchianus
ENSPSIG00000002361	-	57	44.304	ENSXCOG00000003524	ncl	83	51.592	Xiphophorus_couchianus