EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000002520 (Gene tree)
Gene ID: 102459992
Gene Symbol: ZC3H6
Alias: -
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 38356 bases
Position: chrJH212604.1:437438-475793
Accession: 102459992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002572	zf-CCCH	PF00642.24	9.8e-11	1	1
ENSPSIP00000002573	zf-CCCH	PF00642.24	9.8e-11	1	1
ENSPSIP00000002572	zf-CCCH_2	PF14608.6	6.7e-07	1	3
ENSPSIP00000002572	zf-CCCH_2	PF14608.6	6.7e-07	2	3
ENSPSIP00000002572	zf-CCCH_2	PF14608.6	6.7e-07	3	3
ENSPSIP00000002573	zf-CCCH_2	PF14608.6	6.7e-07	1	3
ENSPSIP00000002573	zf-CCCH_2	PF14608.6	6.7e-07	2	3
ENSPSIP00000002573	zf-CCCH_2	PF14608.6	6.7e-07	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002581	ZC3H6-201	4497	XM_006135954	ENSPSIP00000002572	1169 (aa)	XP_025033696	K7F3G2
ENSPSIT00000002582	ZC3H6-202	4461	-	ENSPSIP00000002573	1166 (aa)	-	K7F3G3

Gene Model

Click here to download ENSPSIG00000002520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000002520	ZC3H6	62	64.567	ENSPSIG00000002241	ZC3H4	85	32.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002520	ZC3H6	100	67.845	ENSG00000188177	ZC3H6	98	67.761	Homo_sapiens
ENSPSIG00000002520	ZC3H6	79	41.291	ENSAPOG00000002681	zc3h6	98	38.968	Acanthochromis_polyacanthus
ENSPSIG00000002520	ZC3H6	100	68.506	ENSAMEG00000016194	ZC3H6	98	68.506	Ailuropoda_melanoleuca
ENSPSIG00000002520	ZC3H6	79	42.500	ENSACIG00000021843	zc3h6	84	42.258	Amphilophus_citrinellus
ENSPSIG00000002520	ZC3H6	82	41.675	ENSAOCG00000004039	zc3h6	98	38.880	Amphiprion_ocellaris
ENSPSIG00000002520	ZC3H6	82	41.916	ENSAPEG00000014561	zc3h6	98	39.036	Amphiprion_percula
ENSPSIG00000002520	ZC3H6	82	42.258	ENSATEG00000019063	zc3h6	97	41.346	Anabas_testudineus
ENSPSIG00000002520	ZC3H6	100	81.872	ENSAPLG00000014287	ZC3H6	98	82.723	Anas_platyrhynchos
ENSPSIG00000002520	ZC3H6	100	67.956	ENSANAG00000024229	ZC3H6	98	67.872	Aotus_nancymaae
ENSPSIG00000002520	ZC3H6	82	41.276	ENSACLG00000026343	zc3h6	97	41.271	Astatotilapia_calliptera
ENSPSIG00000002520	ZC3H6	100	68.461	ENSCJAG00000016479	ZC3H6	98	68.377	Callithrix_jacchus
ENSPSIG00000002520	ZC3H6	100	67.884	ENSCAFG00000007160	ZC3H6	98	67.120	Canis_familiaris
ENSPSIG00000002520	ZC3H6	100	67.120	ENSCAFG00020017525	ZC3H6	98	66.270	Canis_lupus_dingo
ENSPSIG00000002520	ZC3H6	81	63.866	ENSCHIG00000019719	-	95	63.866	Capra_hircus
ENSPSIG00000002520	ZC3H6	100	68.492	ENSTSYG00000031857	ZC3H6	98	68.408	Carlito_syrichta
ENSPSIG00000002520	ZC3H6	100	62.005	ENSCPOG00000003445	ZC3H6	99	62.258	Cavia_porcellus
ENSPSIG00000002520	ZC3H6	100	67.761	ENSCATG00000036595	ZC3H6	100	66.851	Cercocebus_atys
ENSPSIG00000002520	ZC3H6	91	65.683	ENSCLAG00000006605	ZC3H6	100	65.498	Chinchilla_lanigera
ENSPSIG00000002520	ZC3H6	91	66.943	ENSCSAG00000016793	ZC3H6	100	66.851	Chlorocebus_sabaeus
ENSPSIG00000002520	ZC3H6	100	67.761	ENSCANG00000041036	ZC3H6	99	67.677	Colobus_angolensis_palliatus
ENSPSIG00000002520	ZC3H6	100	59.275	ENSCGRG00001022022	Zc3h6	99	59.359	Cricetulus_griseus_chok1gshd
ENSPSIG00000002520	ZC3H6	100	61.603	ENSCGRG00000016162	Zc3h6	99	61.688	Cricetulus_griseus_crigri
ENSPSIG00000002520	ZC3H6	62	72.581	ENSCSEG00000012267	zc3h6	94	41.222	Cynoglossus_semilaevis
ENSPSIG00000002520	ZC3H6	100	62.881	ENSDNOG00000044811	ZC3H6	100	63.274	Dasypus_novemcinctus
ENSPSIG00000002520	ZC3H6	100	64.219	ENSDORG00000013967	Zc3h6	100	62.793	Dipodomys_ordii
ENSPSIG00000002520	ZC3H6	85	67.363	ENSEASG00005006493	ZC3H6	100	67.264	Equus_asinus_asinus
ENSPSIG00000002520	ZC3H6	100	68.017	ENSECAG00000023620	ZC3H6	98	67.932	Equus_caballus
ENSPSIG00000002520	ZC3H6	84	60.401	ENSEEUG00000013883	-	84	60.584	Erinaceus_europaeus
ENSPSIG00000002520	ZC3H6	90	36.166	ENSELUG00000012256	zc3h6	98	38.553	Esox_lucius
ENSPSIG00000002520	ZC3H6	100	68.564	ENSFCAG00000008089	ZC3H6	98	68.564	Felis_catus
ENSPSIG00000002520	ZC3H6	100	80.511	ENSFALG00000011589	ZC3H6	98	80.340	Ficedula_albicollis
ENSPSIG00000002520	ZC3H6	100	65.767	ENSFDAG00000002521	ZC3H6	99	65.852	Fukomys_damarensis
ENSPSIG00000002520	ZC3H6	100	81.005	ENSGALG00000008269	ZC3H6	97	81.516	Gallus_gallus
ENSPSIG00000002520	ZC3H6	82	38.985	ENSGAFG00000006771	zc3h6	87	40.669	Gambusia_affinis
ENSPSIG00000002520	ZC3H6	89	48.526	ENSGACG00000005343	zc3h6	99	39.754	Gasterosteus_aculeatus
ENSPSIG00000002520	ZC3H6	100	95.381	ENSGAGG00000010857	ZC3H6	99	95.381	Gopherus_agassizii
ENSPSIG00000002520	ZC3H6	100	67.929	ENSGGOG00000001665	ZC3H6	99	67.256	Gorilla_gorilla
ENSPSIG00000002520	ZC3H6	82	41.376	ENSHBUG00000010088	zc3h6	97	41.352	Haplochromis_burtoni
ENSPSIG00000002520	ZC3H6	100	66.610	ENSHGLG00000011882	ZC3H6	96	66.442	Heterocephalus_glaber_female
ENSPSIG00000002520	ZC3H6	100	64.503	ENSHGLG00100002559	ZC3H6	100	63.492	Heterocephalus_glaber_male
ENSPSIG00000002520	ZC3H6	99	38.487	ENSHCOG00000012519	zc3h6	98	38.542	Hippocampus_comes
ENSPSIG00000002520	ZC3H6	91	64.668	ENSSTOG00000008120	-	100	64.576	Ictidomys_tridecemlineatus
ENSPSIG00000002520	ZC3H6	100	63.207	ENSJJAG00000013206	Zc3h6	98	63.122	Jaculus_jaculus
ENSPSIG00000002520	ZC3H6	82	40.239	ENSKMAG00000016252	zc3h6	97	38.738	Kryptolebias_marmoratus
ENSPSIG00000002520	ZC3H6	67	65.049	ENSLBEG00000003054	zc3h6	82	41.176	Labrus_bergylta
ENSPSIG00000002520	ZC3H6	100	56.010	ENSLACG00000012014	ZC3H6	99	56.664	Latimeria_chalumnae
ENSPSIG00000002520	ZC3H6	100	51.471	ENSLOCG00000016548	zc3h6	97	52.353	Lepisosteus_oculatus
ENSPSIG00000002520	ZC3H6	94	66.306	ENSLAFG00000001151	ZC3H6	100	65.520	Loxodonta_africana
ENSPSIG00000002520	ZC3H6	100	67.677	ENSMFAG00000036963	ZC3H6	98	67.593	Macaca_fascicularis
ENSPSIG00000002520	ZC3H6	100	67.677	ENSMMUG00000016430	ZC3H6	98	67.593	Macaca_mulatta
ENSPSIG00000002520	ZC3H6	100	67.424	ENSMNEG00000031225	ZC3H6	100	66.575	Macaca_nemestrina
ENSPSIG00000002520	ZC3H6	100	67.845	ENSMLEG00000038821	ZC3H6	98	67.761	Mandrillus_leucophaeus
ENSPSIG00000002520	ZC3H6	100	41.115	ENSMAMG00000021546	zc3h6	98	41.781	Mastacembelus_armatus
ENSPSIG00000002520	ZC3H6	82	41.276	ENSMZEG00005006828	zc3h6	97	41.271	Maylandia_zebra
ENSPSIG00000002520	ZC3H6	100	81.175	ENSMGAG00000003025	ZC3H6	98	81.601	Meleagris_gallopavo
ENSPSIG00000002520	ZC3H6	100	60.540	ENSMAUG00000017009	Zc3h6	99	60.404	Mesocricetus_auratus
ENSPSIG00000002520	ZC3H6	100	68.186	ENSMICG00000036353	ZC3H6	98	68.270	Microcebus_murinus
ENSPSIG00000002520	ZC3H6	100	60.336	ENSMOCG00000002054	Zc3h6	98	60.504	Microtus_ochrogaster
ENSPSIG00000002520	ZC3H6	100	73.759	ENSMODG00000006612	ZC3H6	99	73.255	Monodelphis_domestica
ENSPSIG00000002520	ZC3H6	67	60.317	ENSMALG00000002048	zc3h6	83	42.006	Monopterus_albus
ENSPSIG00000002520	ZC3H6	100	58.495	MGP_CAROLIEiJ_G0024278	Zc3h6	99	57.943	Mus_caroli
ENSPSIG00000002520	ZC3H6	100	58.749	ENSMUSG00000042851	Zc3h6	98	58.903	Mus_musculus
ENSPSIG00000002520	ZC3H6	100	59.141	MGP_PahariEiJ_G0025723	Zc3h6	99	58.180	Mus_pahari
ENSPSIG00000002520	ZC3H6	100	58.918	MGP_SPRETEiJ_G0025198	Zc3h6	99	58.194	Mus_spretus
ENSPSIG00000002520	ZC3H6	91	66.822	ENSMPUG00000009624	ZC3H6	100	66.822	Mustela_putorius_furo
ENSPSIG00000002520	ZC3H6	100	64.135	ENSMLUG00000004896	ZC3H6	98	64.219	Myotis_lucifugus
ENSPSIG00000002520	ZC3H6	96	61.689	ENSNGAG00000013596	Zc3h6	98	61.497	Nannospalax_galili
ENSPSIG00000002520	ZC3H6	60	68.912	ENSNBRG00000015382	zc3h6	82	42.111	Neolamprologus_brichardi
ENSPSIG00000002520	ZC3H6	100	67.452	ENSNLEG00000033657	ZC3H6	99	67.283	Nomascus_leucogenys
ENSPSIG00000002520	ZC3H6	100	63.238	ENSOPRG00000012717	ZC3H6	98	63.069	Ochotona_princeps
ENSPSIG00000002520	ZC3H6	96	64.613	ENSODEG00000009099	ZC3H6	98	63.921	Octodon_degus
ENSPSIG00000002520	ZC3H6	82	41.667	ENSONIG00000009880	zc3h6	99	40.223	Oreochromis_niloticus
ENSPSIG00000002520	ZC3H6	100	74.428	ENSOANG00000012054	-	95	74.767	Ornithorhynchus_anatinus
ENSPSIG00000002520	ZC3H6	96	66.346	ENSOCUG00000011125	ZC3H6	100	65.961	Oryctolagus_cuniculus
ENSPSIG00000002520	ZC3H6	100	38.474	ENSORLG00000011179	zc3h6	97	38.536	Oryzias_latipes
ENSPSIG00000002520	ZC3H6	100	37.987	ENSORLG00020017202	zc3h6	97	38.294	Oryzias_latipes_hni
ENSPSIG00000002520	ZC3H6	100	38.118	ENSORLG00015001664	zc3h6	97	37.992	Oryzias_latipes_hsok
ENSPSIG00000002520	ZC3H6	100	38.579	ENSOMEG00000001296	zc3h6	97	39.225	Oryzias_melastigma
ENSPSIG00000002520	ZC3H6	100	66.919	ENSOGAG00000002556	ZC3H6	99	66.835	Otolemur_garnettii
ENSPSIG00000002520	ZC3H6	100	65.705	ENSOARG00000014503	ZC3H6	99	64.706	Ovis_aries
ENSPSIG00000002520	ZC3H6	100	67.761	ENSPPAG00000030495	ZC3H6	99	67.677	Pan_paniscus
ENSPSIG00000002520	ZC3H6	100	68.479	ENSPPRG00000005673	ZC3H6	98	68.479	Panthera_pardus
ENSPSIG00000002520	ZC3H6	100	67.630	ENSPTIG00000015800	ZC3H6	99	67.630	Panthera_tigris_altaica
ENSPSIG00000002520	ZC3H6	100	67.761	ENSPTRG00000012363	ZC3H6	98	67.677	Pan_troglodytes
ENSPSIG00000002520	ZC3H6	100	67.677	ENSPANG00000025224	ZC3H6	98	67.593	Papio_anubis
ENSPSIG00000002520	ZC3H6	63	71.354	ENSPKIG00000007353	zc3h6	81	67.411	Paramormyrops_kingsleyae
ENSPSIG00000002520	ZC3H6	100	61.442	ENSPEMG00000000918	Zc3h6	99	61.274	Peromyscus_maniculatus_bairdii
ENSPSIG00000002520	ZC3H6	91	77.634	ENSPCIG00000029741	ZC3H6	100	77.449	Phascolarctos_cinereus
ENSPSIG00000002520	ZC3H6	82	40.476	ENSPFOG00000015748	zc3h6	98	40.257	Poecilia_formosa
ENSPSIG00000002520	ZC3H6	82	40.278	ENSPLAG00000002469	zc3h6	98	40.288	Poecilia_latipinna
ENSPSIG00000002520	ZC3H6	82	40.476	ENSPMEG00000020802	zc3h6	99	41.889	Poecilia_mexicana
ENSPSIG00000002520	ZC3H6	63	65.174	ENSPREG00000023126	zc3h6	84	59.524	Poecilia_reticulata
ENSPSIG00000002520	ZC3H6	79	63.135	ENSPCAG00000015468	ZC3H6	79	62.421	Procavia_capensis
ENSPSIG00000002520	ZC3H6	100	68.098	ENSPCOG00000016627	ZC3H6	98	67.508	Propithecus_coquereli
ENSPSIG00000002520	ZC3H6	69	80.392	ENSPVAG00000013728	ZC3H6	69	80.392	Pteropus_vampyrus
ENSPSIG00000002520	ZC3H6	62	69.271	ENSPNYG00000018130	zc3h6	84	41.566	Pundamilia_nyererei
ENSPSIG00000002520	ZC3H6	100	42.419	ENSPNAG00000009331	zc3h6	97	43.373	Pygocentrus_nattereri
ENSPSIG00000002520	ZC3H6	100	59.225	ENSRNOG00000026277	Zc3h6	99	57.679	Rattus_norvegicus
ENSPSIG00000002520	ZC3H6	100	68.071	ENSSBOG00000033489	ZC3H6	100	67.373	Saimiri_boliviensis_boliviensis
ENSPSIG00000002520	ZC3H6	84	75.876	ENSSHAG00000016634	ZC3H6	98	76.292	Sarcophilus_harrisii
ENSPSIG00000002520	ZC3H6	100	43.546	ENSSFOG00015004488	zc3h6	97	44.799	Scleropages_formosus
ENSPSIG00000002520	ZC3H6	100	38.867	ENSSDUG00000006105	zc3h6	98	40.924	Seriola_dumerili
ENSPSIG00000002520	ZC3H6	100	38.849	ENSSLDG00000021813	zc3h6	98	40.797	Seriola_lalandi_dorsalis
ENSPSIG00000002520	ZC3H6	100	61.551	ENSSARG00000001035	ZC3H6	99	62.005	Sorex_araneus
ENSPSIG00000002520	ZC3H6	62	61.417	ENSSPUG00000013031	-	99	31.556	Sphenodon_punctatus
ENSPSIG00000002520	ZC3H6	100	67.089	ENSSSCG00000008096	ZC3H6	100	67.787	Sus_scrofa
ENSPSIG00000002520	ZC3H6	100	80.239	ENSTGUG00000007468	ZC3H6	98	80.579	Taeniopygia_guttata
ENSPSIG00000002520	ZC3H6	100	40.468	ENSTRUG00000012901	zc3h6	97	38.629	Takifugu_rubripes
ENSPSIG00000002520	ZC3H6	98	40.302	ENSTNIG00000016608	zc3h6	96	39.037	Tetraodon_nigroviridis
ENSPSIG00000002520	ZC3H6	87	68.978	ENSTBEG00000016232	ZC3H6	91	68.248	Tupaia_belangeri
ENSPSIG00000002520	ZC3H6	77	79.412	ENSTTRG00000013154	ZC3H6	77	79.412	Tursiops_truncatus
ENSPSIG00000002520	ZC3H6	91	68.030	ENSUAMG00000002401	ZC3H6	100	68.030	Ursus_americanus
ENSPSIG00000002520	ZC3H6	91	67.751	ENSUMAG00000008663	ZC3H6	100	71.142	Ursus_maritimus
ENSPSIG00000002520	ZC3H6	100	65.543	ENSVPAG00000005912	ZC3H6	99	65.796	Vicugna_pacos
ENSPSIG00000002520	ZC3H6	91	67.349	ENSVVUG00000028662	ZC3H6	100	67.349	Vulpes_vulpes
ENSPSIG00000002520	ZC3H6	87	64.305	ENSXETG00000013762	zc3h6	96	63.288	Xenopus_tropicalis
ENSPSIG00000002520	ZC3H6	52	65.174	ENSXCOG00000011662	zc3h6	70	61.864	Xiphophorus_couchianus
ENSPSIG00000002520	ZC3H6	82	40.059	ENSXMAG00000020822	zc3h6	97	40.738	Xiphophorus_maculatus