EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000002565 (Gene tree)
Gene ID: 102444983
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 154-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 42752 bases
Position: chrJH207849.1:106437-149188
Accession: 102444983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002621	zf-C2H2	PF00096.26	1.7e-32	1	6
ENSPSIP00000002621	zf-C2H2	PF00096.26	1.7e-32	2	6
ENSPSIP00000002621	zf-C2H2	PF00096.26	1.7e-32	3	6
ENSPSIP00000002621	zf-C2H2	PF00096.26	1.7e-32	4	6
ENSPSIP00000002621	zf-C2H2	PF00096.26	1.7e-32	5	6
ENSPSIP00000002621	zf-C2H2	PF00096.26	1.7e-32	6	6
ENSPSIP00000002621	zf-met	PF12874.7	1.2e-10	1	2
ENSPSIP00000002621	zf-met	PF12874.7	1.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002630	-	6664	XM_006119739	ENSPSIP00000002621	593 (aa)	XP_006119801	K7F3L1

Gene Model

Click here to download ENSPSIG00000002565's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002565's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000002565	-	82	46.304	ENSPSIG00000010248	-	94	46.304
ENSPSIG00000002565	-	82	44.872	ENSPSIG00000004502	-	78	44.872
ENSPSIG00000002565	-	74	72.500	ENSPSIG00000005672	-	99	72.500
ENSPSIG00000002565	-	83	78.571	ENSPSIG00000004614	-	100	78.571
ENSPSIG00000002565	-	83	48.333	ENSPSIG00000015459	-	100	52.995
ENSPSIG00000002565	-	51	43.353	ENSPSIG00000000333	-	98	43.353
ENSPSIG00000002565	-	56	40.678	ENSPSIG00000000075	-	91	40.678
ENSPSIG00000002565	-	56	36.797	ENSPSIG00000006586	-	99	37.354
ENSPSIG00000002565	-	88	55.556	ENSPSIG00000015465	-	99	55.556
ENSPSIG00000002565	-	56	44.749	ENSPSIG00000009650	-	81	44.749
ENSPSIG00000002565	-	92	53.333	ENSPSIG00000016380	-	99	53.333
ENSPSIG00000002565	-	96	48.077	ENSPSIG00000005603	-	99	48.077
ENSPSIG00000002565	-	52	49.191	ENSPSIG00000015216	-	96	49.191
ENSPSIG00000002565	-	89	53.521	ENSPSIG00000009893	-	99	53.521
ENSPSIG00000002565	-	87	62.791	ENSPSIG00000010328	-	98	62.791
ENSPSIG00000002565	-	82	49.650	ENSPSIG00000013021	-	99	49.650
ENSPSIG00000002565	-	61	39.755	ENSPSIG00000009270	-	93	40.400
ENSPSIG00000002565	-	53	45.778	ENSPSIG00000008588	-	100	45.778
ENSPSIG00000002565	-	62	46.018	ENSPSIG00000003152	-	99	46.018
ENSPSIG00000002565	-	92	56.098	ENSPSIG00000012865	-	98	56.098
ENSPSIG00000002565	-	61	40.500	ENSPSIG00000000760	-	91	40.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002565	-	50	52.857	ENSAMXG00000000353	-	92	52.857	Astyanax_mexicanus
ENSPSIG00000002565	-	85	70.455	ENSCPBG00000002430	-	95	70.455	Chrysemys_picta_bellii
ENSPSIG00000002565	-	55	53.333	ENSCPBG00000009609	-	96	51.304	Chrysemys_picta_bellii
ENSPSIG00000002565	-	92	47.059	ENSDNOG00000047529	-	100	47.059	Dasypus_novemcinctus
ENSPSIG00000002565	-	53	45.455	ENSEBUG00000013221	-	92	45.455	Eptatretus_burgeri
ENSPSIG00000002565	-	50	40.870	ENSEBUG00000016164	-	70	40.870	Eptatretus_burgeri
ENSPSIG00000002565	-	51	48.000	ENSELUG00000019008	-	81	40.496	Esox_lucius
ENSPSIG00000002565	-	59	43.137	ENSGAFG00000021131	-	93	43.137	Gambusia_affinis
ENSPSIG00000002565	-	66	46.392	ENSMAUG00000015263	-	74	46.392	Mesocricetus_auratus
ENSPSIG00000002565	-	77	44.712	ENSMOCG00000003394	-	72	44.712	Microtus_ochrogaster
ENSPSIG00000002565	-	78	44.298	ENSMODG00000028916	-	88	44.298	Monodelphis_domestica
ENSPSIG00000002565	-	77	36.653	ENSMPUG00000006562	-	92	36.653	Mustela_putorius_furo
ENSPSIG00000002565	-	89	48.062	ENSMEUG00000012153	-	98	43.689	Notamacropus_eugenii
ENSPSIG00000002565	-	55	42.188	ENSOGAG00000024538	-	70	42.188	Otolemur_garnettii
ENSPSIG00000002565	-	66	46.524	ENSPEMG00000010242	-	96	46.524	Peromyscus_maniculatus_bairdii
ENSPSIG00000002565	-	54	41.317	ENSPLAG00000010389	-	84	39.103	Poecilia_latipinna
ENSPSIG00000002565	-	92	40.476	ENSPCAG00000009106	-	95	40.476	Procavia_capensis
ENSPSIG00000002565	-	54	46.591	ENSPNAG00000018644	-	94	46.591	Pygocentrus_nattereri
ENSPSIG00000002565	-	79	43.103	ENSSHAG00000001415	-	100	40.086	Sarcophilus_harrisii
ENSPSIG00000002565	-	55	40.840	ENSSDUG00000009534	-	79	40.840	Seriola_dumerili
ENSPSIG00000002565	-	57	44.841	ENSSLDG00000013760	-	96	45.872	Seriola_lalandi_dorsalis