EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000002852 (Gene tree)
Gene ID: -
Gene Symbol: SBNO2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 28357 bases
Position: chrJH209284.1:1243233-1271589
Accession: 102463997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000002958	ResIII	PF04851.15	2.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000002970	SBNO2-201	2952	XM_006124982	ENSPSIP00000002958	984 (aa)	-	K7F4J8

Gene Model

Click here to download ENSPSIG00000002852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000002852	SBNO2	79	69.161	ENSPSIG00000009572	-	59	69.161
ENSPSIG00000002852	SBNO2	79	67.120	ENSPSIG00000009256	-	62	67.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002852	SBNO2	100	79.695	ENSG00000064932	SBNO2	74	79.898	Homo_sapiens
ENSPSIG00000002852	SBNO2	99	73.631	ENSAPOG00000003185	si:ch73-63e15.2	73	71.617	Acanthochromis_polyacanthus
ENSPSIG00000002852	SBNO2	99	73.834	ENSAOCG00000016581	si:ch73-63e15.2	93	72.709	Amphiprion_ocellaris
ENSPSIG00000002852	SBNO2	99	73.732	ENSAPEG00000008862	si:ch73-63e15.2	64	73.834	Amphiprion_percula
ENSPSIG00000002852	SBNO2	99	74.164	ENSATEG00000023838	si:ch73-63e15.2	93	73.548	Anabas_testudineus
ENSPSIG00000002852	SBNO2	99	87.195	ENSAPLG00000007158	SBNO2	76	87.195	Anas_platyrhynchos
ENSPSIG00000002852	SBNO2	100	78.557	ENSANAG00000026685	SBNO2	75	78.760	Aotus_nancymaae
ENSPSIG00000002852	SBNO2	99	73.327	ENSACLG00000005090	si:ch73-63e15.2	61	73.529	Astatotilapia_calliptera
ENSPSIG00000002852	SBNO2	99	73.394	ENSAMXG00000015881	si:ch73-63e15.2	70	74.236	Astyanax_mexicanus
ENSPSIG00000002852	SBNO2	99	72.161	ENSAMXG00000018868	sbno2a	95	72.012	Astyanax_mexicanus
ENSPSIG00000002852	SBNO2	100	79.980	ENSBTAG00000020780	SBNO2	75	79.878	Bos_taurus
ENSPSIG00000002852	SBNO2	99	80.061	ENSCAFG00000019543	SBNO2	71	80.081	Canis_familiaris
ENSPSIG00000002852	SBNO2	99	80.061	ENSCAFG00020017115	SBNO2	75	80.061	Canis_lupus_dingo
ENSPSIG00000002852	SBNO2	100	79.878	ENSCHIG00000026127	SBNO2	73	79.878	Capra_hircus
ENSPSIG00000002852	SBNO2	99	78.163	ENSCAPG00000005731	SBNO2	80	77.857	Cavia_aperea
ENSPSIG00000002852	SBNO2	99	78.163	ENSCPOG00000007477	SBNO2	73	77.857	Cavia_porcellus
ENSPSIG00000002852	SBNO2	100	78.376	ENSCCAG00000037518	SBNO2	75	78.579	Cebus_capucinus
ENSPSIG00000002852	SBNO2	100	79.898	ENSCATG00000037046	SBNO2	74	79.797	Cercocebus_atys
ENSPSIG00000002852	SBNO2	99	79.409	ENSCLAG00000010178	SBNO2	84	79.103	Chinchilla_lanigera
ENSPSIG00000002852	SBNO2	100	79.898	ENSCSAG00000012317	SBNO2	71	79.898	Chlorocebus_sabaeus
ENSPSIG00000002852	SBNO2	100	91.667	ENSCPBG00000008920	SBNO2	84	91.667	Chrysemys_picta_bellii
ENSPSIG00000002852	SBNO2	100	79.555	ENSCANG00000036745	SBNO2	85	79.453	Colobus_angolensis_palliatus
ENSPSIG00000002852	SBNO2	100	76.016	ENSCGRG00001023960	Sbno2	72	76.447	Cricetulus_griseus_chok1gshd
ENSPSIG00000002852	SBNO2	100	77.890	ENSCGRG00000011984	Sbno2	72	78.296	Cricetulus_griseus_crigri
ENSPSIG00000002852	SBNO2	99	69.666	ENSCSEG00000006856	si:ch73-63e15.2	75	73.943	Cynoglossus_semilaevis
ENSPSIG00000002852	SBNO2	99	73.178	ENSCVAG00000005663	si:ch73-63e15.2	65	73.077	Cyprinodon_variegatus
ENSPSIG00000002852	SBNO2	100	69.587	ENSDARG00000098801	sbno2a	71	70.191	Danio_rerio
ENSPSIG00000002852	SBNO2	99	72.131	ENSDARG00000016188	SBNO2	68	72.774	Danio_rerio
ENSPSIG00000002852	SBNO2	100	79.675	ENSDORG00000002916	Sbno2	72	80.081	Dipodomys_ordii
ENSPSIG00000002852	SBNO2	100	79.980	ENSEASG00005021621	SBNO2	75	80.285	Equus_asinus_asinus
ENSPSIG00000002852	SBNO2	100	79.878	ENSECAG00000011827	SBNO2	75	80.183	Equus_caballus
ENSPSIG00000002852	SBNO2	99	75.305	ENSELUG00000020457	si:ch73-63e15.2	66	75.305	Esox_lucius
ENSPSIG00000002852	SBNO2	99	85.366	ENSFALG00000013988	SBNO2	71	85.366	Ficedula_albicollis
ENSPSIG00000002852	SBNO2	99	77.268	ENSFDAG00000015186	SBNO2	74	77.166	Fukomys_damarensis
ENSPSIG00000002852	SBNO2	99	73.225	ENSFHEG00000022262	si:ch73-63e15.2	64	73.124	Fundulus_heteroclitus
ENSPSIG00000002852	SBNO2	99	72.551	ENSGMOG00000007542	si:ch73-63e15.2	80	72.653	Gadus_morhua
ENSPSIG00000002852	SBNO2	100	87.005	ENSGALG00000037522	SBNO2	72	86.904	Gallus_gallus
ENSPSIG00000002852	SBNO2	99	73.631	ENSGAFG00000004860	si:ch73-63e15.2	76	73.529	Gambusia_affinis
ENSPSIG00000002852	SBNO2	99	73.679	ENSGACG00000013190	si:ch73-63e15.2	80	73.882	Gasterosteus_aculeatus
ENSPSIG00000002852	SBNO2	100	92.276	ENSGAGG00000008348	SBNO2	73	92.175	Gopherus_agassizii
ENSPSIG00000002852	SBNO2	99	73.272	ENSHBUG00000010742	si:ch73-63e15.2	64	73.476	Haplochromis_burtoni
ENSPSIG00000002852	SBNO2	99	79.307	ENSHGLG00000008739	SBNO2	72	79.001	Heterocephalus_glaber_female
ENSPSIG00000002852	SBNO2	99	79.307	ENSHGLG00100005269	SBNO2	84	79.001	Heterocephalus_glaber_male
ENSPSIG00000002852	SBNO2	99	72.126	ENSHCOG00000000884	si:ch73-63e15.2	71	71.719	Hippocampus_comes
ENSPSIG00000002852	SBNO2	99	71.154	ENSIPUG00000019672	sbno2	92	71.591	Ictalurus_punctatus
ENSPSIG00000002852	SBNO2	99	73.320	ENSIPUG00000000537	si:ch73-63e15.2	70	73.320	Ictalurus_punctatus
ENSPSIG00000002852	SBNO2	100	79.268	ENSSTOG00000025832	SBNO2	72	79.878	Ictidomys_tridecemlineatus
ENSPSIG00000002852	SBNO2	100	75.203	ENSJJAG00000017397	Sbno2	72	75.610	Jaculus_jaculus
ENSPSIG00000002852	SBNO2	99	73.679	ENSKMAG00000005541	si:ch73-63e15.2	64	73.882	Kryptolebias_marmoratus
ENSPSIG00000002852	SBNO2	67	67.809	ENSLBEG00000005937	-	100	67.953	Labrus_bergylta
ENSPSIG00000002852	SBNO2	99	72.893	ENSLBEG00000025016	si:ch73-63e15.2	95	73.395	Labrus_bergylta
ENSPSIG00000002852	SBNO2	68	74.332	ENSLACG00000012598	SBNO2	97	79.132	Latimeria_chalumnae
ENSPSIG00000002852	SBNO2	99	76.220	ENSLOCG00000004643	si:ch73-63e15.2	71	76.118	Lepisosteus_oculatus
ENSPSIG00000002852	SBNO2	98	77.547	ENSLAFG00000008824	SBNO2	78	77.881	Loxodonta_africana
ENSPSIG00000002852	SBNO2	100	77.586	ENSMFAG00000040030	SBNO2	76	77.383	Macaca_fascicularis
ENSPSIG00000002852	SBNO2	100	79.797	ENSMMUG00000010886	SBNO2	74	77.485	Macaca_mulatta
ENSPSIG00000002852	SBNO2	100	79.695	ENSMNEG00000039927	SBNO2	74	79.594	Macaca_nemestrina
ENSPSIG00000002852	SBNO2	100	79.898	ENSMLEG00000038556	SBNO2	83	79.898	Mandrillus_leucophaeus
ENSPSIG00000002852	SBNO2	99	73.401	ENSMAMG00000018758	si:ch73-63e15.2	63	73.503	Mastacembelus_armatus
ENSPSIG00000002852	SBNO2	99	73.171	ENSMZEG00005010682	si:ch73-63e15.2	61	73.374	Maylandia_zebra
ENSPSIG00000002852	SBNO2	100	86.294	ENSMGAG00000003801	SBNO2	76	86.294	Meleagris_gallopavo
ENSPSIG00000002852	SBNO2	100	77.766	ENSMAUG00000008034	Sbno2	72	78.376	Mesocricetus_auratus
ENSPSIG00000002852	SBNO2	100	79.370	ENSMICG00000013071	SBNO2	75	79.675	Microcebus_murinus
ENSPSIG00000002852	SBNO2	100	78.093	ENSMOCG00000010504	Sbno2	72	78.195	Microtus_ochrogaster
ENSPSIG00000002852	SBNO2	100	82.317	ENSMODG00000005382	SBNO2	69	82.317	Monodelphis_domestica
ENSPSIG00000002852	SBNO2	98	67.115	ENSMALG00000021831	si:ch73-63e15.2	96	66.287	Monopterus_albus
ENSPSIG00000002852	SBNO2	100	77.665	ENSMUSG00000035673	Sbno2	97	69.452	Mus_musculus
ENSPSIG00000002852	SBNO2	100	77.868	MGP_PahariEiJ_G0030976	Sbno2	72	78.274	Mus_pahari
ENSPSIG00000002852	SBNO2	100	77.868	MGP_SPRETEiJ_G0016381	Sbno2	77	78.274	Mus_spretus
ENSPSIG00000002852	SBNO2	100	79.573	ENSMPUG00000008747	SBNO2	90	79.573	Mustela_putorius_furo
ENSPSIG00000002852	SBNO2	100	78.354	ENSNGAG00000004308	Sbno2	73	78.354	Nannospalax_galili
ENSPSIG00000002852	SBNO2	99	71.530	ENSNBRG00000022968	si:ch73-63e15.2	93	74.679	Neolamprologus_brichardi
ENSPSIG00000002852	SBNO2	90	82.305	ENSNLEG00000001305	SBNO2	72	81.961	Nomascus_leucogenys
ENSPSIG00000002852	SBNO2	88	74.907	ENSMEUG00000013511	-	70	74.907	Notamacropus_eugenii
ENSPSIG00000002852	SBNO2	99	77.416	ENSOPRG00000017238	SBNO2	80	77.823	Ochotona_princeps
ENSPSIG00000002852	SBNO2	99	77.835	ENSODEG00000011822	SBNO2	72	77.528	Octodon_degus
ENSPSIG00000002852	SBNO2	99	73.679	ENSONIG00000002490	si:ch73-63e15.2	77	73.360	Oreochromis_niloticus
ENSPSIG00000002852	SBNO2	99	72.462	ENSORLG00000000913	si:ch73-63e15.2	65	72.563	Oryzias_latipes
ENSPSIG00000002852	SBNO2	99	72.462	ENSORLG00020010978	si:ch73-63e15.2	65	72.663	Oryzias_latipes_hni
ENSPSIG00000002852	SBNO2	99	72.362	ENSORLG00015000202	si:ch73-63e15.2	65	72.563	Oryzias_latipes_hsok
ENSPSIG00000002852	SBNO2	99	72.691	ENSOMEG00000000359	si:ch73-63e15.2	62	72.892	Oryzias_melastigma
ENSPSIG00000002852	SBNO2	100	78.455	ENSOARG00000011130	SBNO2	74	78.455	Ovis_aries
ENSPSIG00000002852	SBNO2	100	79.695	ENSPPAG00000032482	SBNO2	76	79.898	Pan_paniscus
ENSPSIG00000002852	SBNO2	100	79.797	ENSPTRG00000010185	SBNO2	74	80.102	Pan_troglodytes
ENSPSIG00000002852	SBNO2	100	75.635	ENSPANG00000009658	SBNO2	73	75.533	Papio_anubis
ENSPSIG00000002852	SBNO2	99	73.108	ENSPKIG00000024201	si:ch73-63e15.2	69	73.824	Paramormyrops_kingsleyae
ENSPSIG00000002852	SBNO2	91	74.776	ENSPKIG00000009707	-	71	74.971	Paramormyrops_kingsleyae
ENSPSIG00000002852	SBNO2	99	71.050	ENSPMGG00000014375	si:ch73-63e15.2	73	71.152	Periophthalmus_magnuspinnatus
ENSPSIG00000002852	SBNO2	100	75.529	ENSPEMG00000024122	Sbno2	72	75.632	Peromyscus_maniculatus_bairdii
ENSPSIG00000002852	SBNO2	100	82.114	ENSPCIG00000011264	SBNO2	70	82.317	Phascolarctos_cinereus
ENSPSIG00000002852	SBNO2	99	73.529	ENSPFOG00000004096	si:ch73-63e15.2	84	72.663	Poecilia_formosa
ENSPSIG00000002852	SBNO2	99	73.631	ENSPLAG00000014653	si:ch73-63e15.2	64	73.529	Poecilia_latipinna
ENSPSIG00000002852	SBNO2	99	73.529	ENSPMEG00000002129	si:ch73-63e15.2	90	72.557	Poecilia_mexicana
ENSPSIG00000002852	SBNO2	99	73.834	ENSPREG00000006755	si:ch73-63e15.2	61	73.834	Poecilia_reticulata
ENSPSIG00000002852	SBNO2	94	75.673	ENSPCAG00000012256	SBNO2	68	75.673	Procavia_capensis
ENSPSIG00000002852	SBNO2	100	71.400	ENSPCOG00000015216	SBNO2	74	71.602	Propithecus_coquereli
ENSPSIG00000002852	SBNO2	99	73.171	ENSPNYG00000019926	si:ch73-63e15.2	64	73.374	Pundamilia_nyererei
ENSPSIG00000002852	SBNO2	99	72.278	ENSPNAG00000026609	sbno2a	90	68.319	Pygocentrus_nattereri
ENSPSIG00000002852	SBNO2	99	73.802	ENSPNAG00000020260	si:ch73-63e15.2	69	74.542	Pygocentrus_nattereri
ENSPSIG00000002852	SBNO2	100	78.173	ENSRNOG00000013987	Sbno2	76	78.579	Rattus_norvegicus
ENSPSIG00000002852	SBNO2	100	76.085	ENSRBIG00000009740	SBNO2	79	75.883	Rhinopithecus_bieti
ENSPSIG00000002852	SBNO2	83	81.121	ENSRROG00000044671	SBNO2	69	80.999	Rhinopithecus_roxellana
ENSPSIG00000002852	SBNO2	100	78.376	ENSSBOG00000023562	SBNO2	75	78.579	Saimiri_boliviensis_boliviensis
ENSPSIG00000002852	SBNO2	100	80.996	ENSSHAG00000010241	SBNO2	84	80.996	Sarcophilus_harrisii
ENSPSIG00000002852	SBNO2	99	71.224	ENSSFOG00015005861	si:ch73-63e15.2	78	71.862	Scleropages_formosus
ENSPSIG00000002852	SBNO2	99	73.556	ENSSMAG00000012489	si:ch73-63e15.2	62	73.503	Scophthalmus_maximus
ENSPSIG00000002852	SBNO2	99	74.085	ENSSDUG00000003527	si:ch73-63e15.2	62	74.187	Seriola_dumerili
ENSPSIG00000002852	SBNO2	99	73.882	ENSSLDG00000004623	si:ch73-63e15.2	62	73.984	Seriola_lalandi_dorsalis
ENSPSIG00000002852	SBNO2	99	74.112	ENSSPAG00000017717	si:ch73-63e15.2	63	74.112	Stegastes_partitus
ENSPSIG00000002852	SBNO2	100	80.183	ENSSSCG00000030042	SBNO2	76	80.081	Sus_scrofa
ENSPSIG00000002852	SBNO2	99	73.069	ENSTRUG00000018193	si:ch73-63e15.2	74	73.577	Takifugu_rubripes
ENSPSIG00000002852	SBNO2	53	76.879	ENSTNIG00000000856	si:ch73-63e15.2	99	77.842	Tetraodon_nigroviridis
ENSPSIG00000002852	SBNO2	100	80.102	ENSUAMG00000006568	SBNO2	91	87.273	Ursus_americanus
ENSPSIG00000002852	SBNO2	99	80.183	ENSVVUG00000022823	SBNO2	70	80.183	Vulpes_vulpes
ENSPSIG00000002852	SBNO2	91	73.557	ENSXETG00000021579	sbno2	82	73.904	Xenopus_tropicalis
ENSPSIG00000002852	SBNO2	98	72.066	ENSXCOG00000009209	si:ch73-63e15.2	91	71.773	Xiphophorus_couchianus
ENSPSIG00000002852	SBNO2	99	73.428	ENSXMAG00000012091	si:ch73-63e15.2	69	75.751	Xiphophorus_maculatus