EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000002937 (Gene tree)
Gene ID: 102449971
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 15377 bases
Position: chrJH205564.1:3432438-3447814
Accession: 102449971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003048	RNase_H	PF00075.24	1.8e-46	1	1
ENSPSIP00000003050	RNase_H	PF00075.24	2.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003060	RNASEH1-201	4804	XM_006112051	ENSPSIP00000003048	272 (aa)	XP_006112113	K7F4T8
ENSPSIT00000003062	RNASEH1-202	2742	-	ENSPSIP00000003050	297 (aa)	-	K7F4U0

Gene Model

Click here to download ENSPSIG00000002937's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000002937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000002937	RNASEH1	98	61.049	ENSG00000171865	RNASEH1	95	58.763	Homo_sapiens
ENSPSIG00000002937	RNASEH1	99	55.474	ENSAPOG00000000412	rnaseh1	88	56.569	Acanthochromis_polyacanthus
ENSPSIG00000002937	RNASEH1	98	64.684	ENSAMEG00000018433	RNASEH1	89	64.684	Ailuropoda_melanoleuca
ENSPSIG00000002937	RNASEH1	99	54.815	ENSACIG00000014666	rnaseh1	87	55.926	Amphilophus_citrinellus
ENSPSIG00000002937	RNASEH1	99	54.745	ENSAOCG00000015210	rnaseh1	88	55.839	Amphiprion_ocellaris
ENSPSIG00000002937	RNASEH1	99	55.109	ENSAPEG00000014104	rnaseh1	88	56.204	Amphiprion_percula
ENSPSIG00000002937	RNASEH1	99	55.351	ENSATEG00000000598	rnaseh1	94	54.982	Anabas_testudineus
ENSPSIG00000002937	RNASEH1	94	63.878	ENSAPLG00000001961	RNASEH1	100	64.341	Anas_platyrhynchos
ENSPSIG00000002937	RNASEH1	99	60.526	ENSACAG00000016857	rnaseh1	99	59.146	Anolis_carolinensis
ENSPSIG00000002937	RNASEH1	98	60.821	ENSANAG00000024055	RNASEH1	89	60.821	Aotus_nancymaae
ENSPSIG00000002937	RNASEH1	99	54.412	ENSACLG00000006741	rnaseh1	87	55.147	Astatotilapia_calliptera
ENSPSIG00000002937	RNASEH1	99	48.529	ENSAMXG00000042940	rnaseh1	96	48.529	Astyanax_mexicanus
ENSPSIG00000002937	RNASEH1	98	61.049	ENSBTAG00000016235	RNASEH1	98	58.644	Bos_taurus
ENSPSIG00000002937	RNASEH1	98	37.218	WBGene00004382	rnh-1.0	95	38.043	Caenorhabditis_elegans
ENSPSIG00000002937	RNASEH1	98	59.779	ENSCJAG00000035450	RNASEH1	89	59.779	Callithrix_jacchus
ENSPSIG00000002937	RNASEH1	98	63.197	ENSCAFG00000003259	RNASEH1	89	63.197	Canis_familiaris
ENSPSIG00000002937	RNASEH1	55	78.000	ENSCAFG00020004994	RNASEH1	97	78.000	Canis_lupus_dingo
ENSPSIG00000002937	RNASEH1	90	48.996	ENSCHIG00000022230	-	98	48.996	Capra_hircus
ENSPSIG00000002937	RNASEH1	98	64.074	ENSCHIG00000022264	-	92	61.484	Capra_hircus
ENSPSIG00000002937	RNASEH1	99	65.556	ENSTSYG00000012926	RNASEH1	89	65.683	Carlito_syrichta
ENSPSIG00000002937	RNASEH1	92	62.249	ENSCAPG00000004813	RNASEH1	97	62.249	Cavia_aperea
ENSPSIG00000002937	RNASEH1	98	63.296	ENSCPOG00000022278	Rnaseh1	86	63.296	Cavia_porcellus
ENSPSIG00000002937	RNASEH1	98	61.029	ENSCCAG00000038017	RNASEH1	89	61.029	Cebus_capucinus
ENSPSIG00000002937	RNASEH1	98	59.925	ENSCATG00000016515	-	89	59.925	Cercocebus_atys
ENSPSIG00000002937	RNASEH1	98	54.478	ENSCATG00000016818	-	89	54.478	Cercocebus_atys
ENSPSIG00000002937	RNASEH1	98	62.547	ENSCLAG00000002440	RNASEH1	89	62.547	Chinchilla_lanigera
ENSPSIG00000002937	RNASEH1	98	59.701	ENSCSAG00000006943	RNASEH1	89	60.223	Chlorocebus_sabaeus
ENSPSIG00000002937	RNASEH1	65	75.568	ENSCHOG00000008547	RNASEH1	86	75.568	Choloepus_hoffmanni
ENSPSIG00000002937	RNASEH1	100	90.809	ENSCPBG00000021620	RNASEH1	100	90.809	Chrysemys_picta_bellii
ENSPSIG00000002937	RNASEH1	99	40.909	ENSCING00000014054	-	93	40.909	Ciona_intestinalis
ENSPSIG00000002937	RNASEH1	84	38.889	ENSCSAVG00000000009	-	96	38.889	Ciona_savignyi
ENSPSIG00000002937	RNASEH1	98	60.300	ENSCANG00000037763	RNASEH1	89	60.300	Colobus_angolensis_palliatus
ENSPSIG00000002937	RNASEH1	98	62.547	ENSCGRG00001008950	Rnaseh1	89	63.235	Cricetulus_griseus_chok1gshd
ENSPSIG00000002937	RNASEH1	98	62.547	ENSCGRG00000006029	Rnaseh1	89	63.235	Cricetulus_griseus_crigri
ENSPSIG00000002937	RNASEH1	99	50.186	ENSCSEG00000005741	rnaseh1	94	49.462	Cynoglossus_semilaevis
ENSPSIG00000002937	RNASEH1	99	54.015	ENSCVAG00000018717	rnaseh1	88	56.089	Cyprinodon_variegatus
ENSPSIG00000002937	RNASEH1	99	56.228	ENSDARG00000042571	rnaseh1	98	55.422	Danio_rerio
ENSPSIG00000002937	RNASEH1	98	61.798	ENSDNOG00000016056	RNASEH1	89	61.940	Dasypus_novemcinctus
ENSPSIG00000002937	RNASEH1	98	61.481	ENSDORG00000000704	Rnaseh1	89	61.481	Dipodomys_ordii
ENSPSIG00000002937	RNASEH1	99	37.755	FBgn0023171	rnh1	93	37.755	Drosophila_melanogaster
ENSPSIG00000002937	RNASEH1	99	58.909	ENSETEG00000012674	RNASEH1	89	58.909	Echinops_telfairi
ENSPSIG00000002937	RNASEH1	99	45.361	ENSEBUG00000008898	rnaseh1	98	45.517	Eptatretus_burgeri
ENSPSIG00000002937	RNASEH1	98	48.339	ENSEBUG00000006116	rnaseh1	78	48.529	Eptatretus_burgeri
ENSPSIG00000002937	RNASEH1	98	63.670	ENSEASG00005022200	RNASEH1	87	63.670	Equus_asinus_asinus
ENSPSIG00000002937	RNASEH1	98	63.670	ENSECAG00000020695	RNASEH1	87	63.670	Equus_caballus
ENSPSIG00000002937	RNASEH1	99	52.899	ENSELUG00000010112	rnaseh1	91	52.899	Esox_lucius
ENSPSIG00000002937	RNASEH1	98	62.547	ENSFCAG00000025832	RNASEH1	89	63.060	Felis_catus
ENSPSIG00000002937	RNASEH1	98	68.864	ENSFALG00000002069	RNASEH1	98	66.667	Ficedula_albicollis
ENSPSIG00000002937	RNASEH1	98	62.362	ENSFDAG00000002035	RNASEH1	79	63.060	Fukomys_damarensis
ENSPSIG00000002937	RNASEH1	99	53.333	ENSGMOG00000013818	rnaseh1	89	53.333	Gadus_morhua
ENSPSIG00000002937	RNASEH1	99	65.763	ENSGALG00000016389	RNASEH1	99	64.746	Gallus_gallus
ENSPSIG00000002937	RNASEH1	99	54.044	ENSGAFG00000001776	rnaseh1	90	54.044	Gambusia_affinis
ENSPSIG00000002937	RNASEH1	99	54.412	ENSGACG00000011935	rnaseh1	89	55.147	Gasterosteus_aculeatus
ENSPSIG00000002937	RNASEH1	99	90.000	ENSGAGG00000009150	RNASEH1	62	90.000	Gopherus_agassizii
ENSPSIG00000002937	RNASEH1	98	60.674	ENSGGOG00000034822	RNASEH1	89	60.886	Gorilla_gorilla
ENSPSIG00000002937	RNASEH1	99	53.875	ENSHBUG00000004666	rnaseh1	87	55.109	Haplochromis_burtoni
ENSPSIG00000002937	RNASEH1	98	62.313	ENSHGLG00000002585	Rnaseh1	82	62.313	Heterocephalus_glaber_female
ENSPSIG00000002937	RNASEH1	98	62.313	ENSHGLG00100005105	Rnaseh1	82	62.313	Heterocephalus_glaber_male
ENSPSIG00000002937	RNASEH1	99	54.982	ENSHCOG00000012329	rnaseh1	88	56.250	Hippocampus_comes
ENSPSIG00000002937	RNASEH1	99	55.390	ENSIPUG00000023060	rnaseh1	97	55.390	Ictalurus_punctatus
ENSPSIG00000002937	RNASEH1	98	61.423	ENSSTOG00000012774	RNASEH1	91	61.567	Ictidomys_tridecemlineatus
ENSPSIG00000002937	RNASEH1	90	60.246	ENSJJAG00000020238	Rnaseh1	90	60.976	Jaculus_jaculus
ENSPSIG00000002937	RNASEH1	98	56.929	ENSJJAG00000021481	-	89	56.929	Jaculus_jaculus
ENSPSIG00000002937	RNASEH1	96	50.192	ENSJJAG00000008994	-	88	50.192	Jaculus_jaculus
ENSPSIG00000002937	RNASEH1	99	52.416	ENSKMAG00000001373	rnaseh1	88	52.593	Kryptolebias_marmoratus
ENSPSIG00000002937	RNASEH1	100	50.735	ENSLBEG00000004480	rnaseh1	97	51.838	Labrus_bergylta
ENSPSIG00000002937	RNASEH1	99	60.364	ENSLACG00000007100	RNASEH1	88	60.364	Latimeria_chalumnae
ENSPSIG00000002937	RNASEH1	99	57.401	ENSLOCG00000017212	rnaseh1	97	59.480	Lepisosteus_oculatus
ENSPSIG00000002937	RNASEH1	98	62.547	ENSLAFG00000015091	RNASEH1	89	62.687	Loxodonta_africana
ENSPSIG00000002937	RNASEH1	98	53.933	ENSMFAG00000002323	-	89	53.933	Macaca_fascicularis
ENSPSIG00000002937	RNASEH1	98	60.300	ENSMFAG00000000063	-	89	60.300	Macaca_fascicularis
ENSPSIG00000002937	RNASEH1	98	55.431	ENSMMUG00000019280	-	89	55.431	Macaca_mulatta
ENSPSIG00000002937	RNASEH1	98	60.674	ENSMNEG00000040183	-	89	60.674	Macaca_nemestrina
ENSPSIG00000002937	RNASEH1	98	54.307	ENSMNEG00000029676	-	89	54.307	Macaca_nemestrina
ENSPSIG00000002937	RNASEH1	98	57.037	ENSMLEG00000028662	-	89	58.364	Mandrillus_leucophaeus
ENSPSIG00000002937	RNASEH1	92	59.438	ENSMLEG00000039352	-	98	59.438	Mandrillus_leucophaeus
ENSPSIG00000002937	RNASEH1	99	54.779	ENSMAMG00000019725	rnaseh1	94	54.779	Mastacembelus_armatus
ENSPSIG00000002937	RNASEH1	99	54.412	ENSMZEG00005013006	rnaseh1	87	55.147	Maylandia_zebra
ENSPSIG00000002937	RNASEH1	89	66.255	ENSMGAG00000013979	RNASEH1	99	66.667	Meleagris_gallopavo
ENSPSIG00000002937	RNASEH1	98	62.731	ENSMAUG00000014957	Rnaseh1	89	62.731	Mesocricetus_auratus
ENSPSIG00000002937	RNASEH1	98	64.312	ENSMICG00000033156	RNASEH1	88	64.312	Microcebus_murinus
ENSPSIG00000002937	RNASEH1	98	60.967	ENSMOCG00000015522	Rnaseh1	89	61.852	Microtus_ochrogaster
ENSPSIG00000002937	RNASEH1	100	51.838	ENSMMOG00000015902	rnaseh1	89	51.838	Mola_mola
ENSPSIG00000002937	RNASEH1	64	64.000	ENSMODG00000028814	-	93	53.469	Monodelphis_domestica
ENSPSIG00000002937	RNASEH1	99	61.338	ENSMODG00000014491	-	89	61.338	Monodelphis_domestica
ENSPSIG00000002937	RNASEH1	99	54.579	ENSMALG00000010565	rnaseh1	95	50.680	Monopterus_albus
ENSPSIG00000002937	RNASEH1	98	62.454	MGP_CAROLIEiJ_G0017660	Rnaseh1	89	63.333	Mus_caroli
ENSPSIG00000002937	RNASEH1	98	62.082	ENSMUSG00000020630	Rnaseh1	89	62.963	Mus_musculus
ENSPSIG00000002937	RNASEH1	98	61.798	MGP_PahariEiJ_G0029418	Rnaseh1	89	62.687	Mus_pahari
ENSPSIG00000002937	RNASEH1	98	62.454	MGP_SPRETEiJ_G0018502	Rnaseh1	89	62.593	Mus_spretus
ENSPSIG00000002937	RNASEH1	63	73.684	ENSMPUG00000012984	RNASEH1	83	73.684	Mustela_putorius_furo
ENSPSIG00000002937	RNASEH1	98	60.517	ENSNGAG00000015966	Rnaseh1	84	61.710	Nannospalax_galili
ENSPSIG00000002937	RNASEH1	99	54.779	ENSNBRG00000008739	rnaseh1	87	55.515	Neolamprologus_brichardi
ENSPSIG00000002937	RNASEH1	91	53.200	ENSNLEG00000000059	-	88	53.200	Nomascus_leucogenys
ENSPSIG00000002937	RNASEH1	98	50.746	ENSNLEG00000015400	RNASEH1	87	51.301	Nomascus_leucogenys
ENSPSIG00000002937	RNASEH1	99	42.963	ENSMEUG00000003610	-	90	42.963	Notamacropus_eugenii
ENSPSIG00000002937	RNASEH1	98	59.341	ENSOPRG00000005072	RNASEH1	89	59.341	Ochotona_princeps
ENSPSIG00000002937	RNASEH1	98	61.423	ENSODEG00000000235	Rnaseh1	86	61.423	Octodon_degus
ENSPSIG00000002937	RNASEH1	99	54.779	ENSONIG00000018697	rnaseh1	97	55.515	Oreochromis_niloticus
ENSPSIG00000002937	RNASEH1	98	61.423	ENSOCUG00000006117	RNASEH1	89	62.313	Oryctolagus_cuniculus
ENSPSIG00000002937	RNASEH1	99	52.416	ENSORLG00000018127	rnaseh1	95	53.285	Oryzias_latipes
ENSPSIG00000002937	RNASEH1	99	52.416	ENSORLG00020013660	rnaseh1	95	51.689	Oryzias_latipes_hni
ENSPSIG00000002937	RNASEH1	99	51.661	ENSORLG00015011338	rnaseh1	95	52.027	Oryzias_latipes_hsok
ENSPSIG00000002937	RNASEH1	90	51.020	ENSOMEG00000004710	rnaseh1	90	51.020	Oryzias_melastigma
ENSPSIG00000002937	RNASEH1	98	61.049	ENSOGAG00000017176	RNASEH1	89	61.194	Otolemur_garnettii
ENSPSIG00000002937	RNASEH1	98	54.182	ENSOARG00000005386	RNASEH1	89	54.182	Ovis_aries
ENSPSIG00000002937	RNASEH1	98	61.049	ENSPPAG00000034221	RNASEH1	89	61.049	Pan_paniscus
ENSPSIG00000002937	RNASEH1	98	62.172	ENSPPRG00000015513	RNASEH1	89	62.687	Panthera_pardus
ENSPSIG00000002937	RNASEH1	92	61.847	ENSPTIG00000019034	RNASEH1	83	62.400	Panthera_tigris_altaica
ENSPSIG00000002937	RNASEH1	91	52.756	ENSPTRG00000043403	-	99	51.439	Pan_troglodytes
ENSPSIG00000002937	RNASEH1	98	61.049	ENSPTRG00000011614	RNASEH1	89	61.049	Pan_troglodytes
ENSPSIG00000002937	RNASEH1	98	53.333	ENSPANG00000018246	-	88	53.333	Papio_anubis
ENSPSIG00000002937	RNASEH1	98	58.955	ENSPANG00000000443	RNASEH1	97	58.498	Papio_anubis
ENSPSIG00000002937	RNASEH1	99	52.985	ENSPKIG00000003146	rnaseh1	97	53.358	Paramormyrops_kingsleyae
ENSPSIG00000002937	RNASEH1	98	51.493	ENSPMGG00000017463	rnaseh1	90	51.493	Periophthalmus_magnuspinnatus
ENSPSIG00000002937	RNASEH1	98	60.000	ENSPEMG00000022465	-	89	61.567	Peromyscus_maniculatus_bairdii
ENSPSIG00000002937	RNASEH1	55	42.384	ENSPCIG00000026047	-	85	42.384	Phascolarctos_cinereus
ENSPSIG00000002937	RNASEH1	99	60.595	ENSPCIG00000023334	-	89	60.595	Phascolarctos_cinereus
ENSPSIG00000002937	RNASEH1	99	54.613	ENSPFOG00000002841	rnaseh1	90	54.613	Poecilia_formosa
ENSPSIG00000002937	RNASEH1	72	45.455	ENSPLAG00000021349	-	74	45.455	Poecilia_latipinna
ENSPSIG00000002937	RNASEH1	99	54.779	ENSPMEG00000016826	rnaseh1	90	54.779	Poecilia_mexicana
ENSPSIG00000002937	RNASEH1	99	53.818	ENSPREG00000012197	rnaseh1	90	53.818	Poecilia_reticulata
ENSPSIG00000002937	RNASEH1	91	55.466	ENSPPYG00000008067	-	90	55.466	Pongo_abelii
ENSPSIG00000002937	RNASEH1	98	50.187	ENSPPYG00000025873	RNASEH1	88	50.558	Pongo_abelii
ENSPSIG00000002937	RNASEH1	98	58.801	ENSPCAG00000002500	RNASEH1	89	58.955	Procavia_capensis
ENSPSIG00000002937	RNASEH1	98	57.621	ENSPCOG00000019444	RNASEH1	88	57.778	Propithecus_coquereli
ENSPSIG00000002937	RNASEH1	98	59.925	ENSPVAG00000002070	RNASEH1	89	59.925	Pteropus_vampyrus
ENSPSIG00000002937	RNASEH1	99	54.044	ENSPNYG00000001292	rnaseh1	87	54.412	Pundamilia_nyererei
ENSPSIG00000002937	RNASEH1	99	54.745	ENSPNAG00000022344	rnaseh1	89	55.636	Pygocentrus_nattereri
ENSPSIG00000002937	RNASEH1	98	62.547	ENSRNOG00000008584	Rnaseh1	89	63.060	Rattus_norvegicus
ENSPSIG00000002937	RNASEH1	98	59.551	ENSRBIG00000034222	RNASEH1	88	59.551	Rhinopithecus_bieti
ENSPSIG00000002937	RNASEH1	98	59.551	ENSRROG00000041761	RNASEH1	88	59.551	Rhinopithecus_roxellana
ENSPSIG00000002937	RNASEH1	99	46.479	YMR234W	-	85	46.479	Saccharomyces_cerevisiae
ENSPSIG00000002937	RNASEH1	98	60.219	ENSSBOG00000025411	RNASEH1	89	60.219	Saimiri_boliviensis_boliviensis
ENSPSIG00000002937	RNASEH1	99	63.197	ENSSHAG00000013051	RNASEH1	88	63.197	Sarcophilus_harrisii
ENSPSIG00000002937	RNASEH1	99	51.636	ENSSFOG00015002709	rnaseh1	91	51.636	Scleropages_formosus
ENSPSIG00000002937	RNASEH1	99	55.185	ENSSMAG00000007586	rnaseh1	87	56.667	Scophthalmus_maximus
ENSPSIG00000002937	RNASEH1	99	54.815	ENSSDUG00000008217	rnaseh1	93	55.762	Seriola_dumerili
ENSPSIG00000002937	RNASEH1	96	53.053	ENSSLDG00000000442	rnaseh1	94	54.724	Seriola_lalandi_dorsalis
ENSPSIG00000002937	RNASEH1	99	72.491	ENSSPUG00000006644	RNASEH1	99	70.169	Sphenodon_punctatus
ENSPSIG00000002937	RNASEH1	99	56.569	ENSSPAG00000009353	rnaseh1	88	58.394	Stegastes_partitus
ENSPSIG00000002937	RNASEH1	98	60.300	ENSSSCG00000025305	RNASEH1	89	60.300	Sus_scrofa
ENSPSIG00000002937	RNASEH1	99	66.426	ENSTGUG00000012980	RNASEH1	99	63.787	Taeniopygia_guttata
ENSPSIG00000002937	RNASEH1	99	51.460	ENSTRUG00000015774	rnaseh1	95	52.555	Takifugu_rubripes
ENSPSIG00000002937	RNASEH1	99	54.982	ENSTNIG00000010715	rnaseh1	95	55.720	Tetraodon_nigroviridis
ENSPSIG00000002937	RNASEH1	98	57.678	ENSTTRG00000001615	RNASEH1	89	57.678	Tursiops_truncatus
ENSPSIG00000002937	RNASEH1	61	71.856	ENSUAMG00000018254	RNASEH1	87	71.856	Ursus_americanus
ENSPSIG00000002937	RNASEH1	75	60.000	ENSUMAG00000003941	RNASEH1	73	53.333	Ursus_maritimus
ENSPSIG00000002937	RNASEH1	98	50.000	ENSVPAG00000011589	RNASEH1	89	50.000	Vicugna_pacos
ENSPSIG00000002937	RNASEH1	98	63.197	ENSVVUG00000008633	RNASEH1	80	63.197	Vulpes_vulpes
ENSPSIG00000002937	RNASEH1	85	60.000	ENSXETG00000030371	-	100	65.957	Xenopus_tropicalis
ENSPSIG00000002937	RNASEH1	99	54.779	ENSXETG00000001212	rnaseh1	100	60.784	Xenopus_tropicalis
ENSPSIG00000002937	RNASEH1	99	52.000	ENSXMAG00000002357	rnaseh1	90	53.455	Xiphophorus_maculatus