EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000003043 (Gene tree)
Gene ID: 102453927
Gene Symbol: PYM1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 6741 bases
Position: chrJH211016.1:3037010-3043750
Accession: 102453927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003167	Mago-bind	PF09282.10	9.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003180	PYM1-201	1609	XM_006131235	ENSPSIP00000003167	211 (aa)	XP_006131297	K7F557

Gene Model

Click here to download ENSPSIG00000003043's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03013	RNA transport	KEGG
pss03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003043's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003043	PYM1	94	64.390	ENSG00000170473	PYM1	94	64.251	Homo_sapiens
ENSPSIG00000003043	PYM1	99	54.795	ENSAPOG00000023045	pym1	94	54.808	Acanthochromis_polyacanthus
ENSPSIG00000003043	PYM1	90	63.492	ENSAMEG00000003091	PYM1	89	63.492	Ailuropoda_melanoleuca
ENSPSIG00000003043	PYM1	99	58.333	ENSACIG00000012769	pym1	94	57.561	Amphilophus_citrinellus
ENSPSIG00000003043	PYM1	99	55.046	ENSAOCG00000021358	pym1	94	55.072	Amphiprion_ocellaris
ENSPSIG00000003043	PYM1	99	55.046	ENSAPEG00000022679	pym1	94	55.072	Amphiprion_percula
ENSPSIG00000003043	PYM1	99	53.953	ENSATEG00000024022	pym1	94	53.883	Anabas_testudineus
ENSPSIG00000003043	PYM1	94	70.813	ENSACAG00000005714	PYM1	94	70.813	Anolis_carolinensis
ENSPSIG00000003043	PYM1	94	64.390	ENSANAG00000036967	PYM1	94	64.390	Aotus_nancymaae
ENSPSIG00000003043	PYM1	100	53.153	ENSAMXG00000007650	pym1	94	52.857	Astyanax_mexicanus
ENSPSIG00000003043	PYM1	90	65.608	ENSBTAG00000031146	PYM1	89	65.608	Bos_taurus
ENSPSIG00000003043	PYM1	94	64.878	ENSCJAG00000041077	PYM1	94	64.734	Callithrix_jacchus
ENSPSIG00000003043	PYM1	90	66.316	ENSCAFG00000000076	PYM1	89	65.608	Canis_familiaris
ENSPSIG00000003043	PYM1	90	66.316	ENSCAFG00020026099	PYM1	89	65.608	Canis_lupus_dingo
ENSPSIG00000003043	PYM1	91	64.103	ENSCHIG00000026207	PYM1	93	65.079	Capra_hircus
ENSPSIG00000003043	PYM1	94	62.687	ENSTSYG00000000787	PYM1	94	63.184	Carlito_syrichta
ENSPSIG00000003043	PYM1	89	64.550	ENSCAPG00000010374	PYM1	94	64.550	Cavia_aperea
ENSPSIG00000003043	PYM1	90	64.737	ENSCPOG00000031546	PYM1	89	64.737	Cavia_porcellus
ENSPSIG00000003043	PYM1	94	64.390	ENSCCAG00000026187	PYM1	94	64.251	Cebus_capucinus
ENSPSIG00000003043	PYM1	94	64.039	ENSCATG00000018801	PYM1	94	62.687	Cercocebus_atys
ENSPSIG00000003043	PYM1	90	64.021	ENSCLAG00000007964	PYM1	89	64.550	Chinchilla_lanigera
ENSPSIG00000003043	PYM1	91	63.402	ENSCSAG00000005291	PYM1	94	61.979	Chlorocebus_sabaeus
ENSPSIG00000003043	PYM1	96	40.191	ENSCING00000006448	-	87	42.932	Ciona_intestinalis
ENSPSIG00000003043	PYM1	93	34.862	ENSCSAVG00000009805	-	83	38.542	Ciona_savignyi
ENSPSIG00000003043	PYM1	93	58.209	ENSCANG00000019757	-	82	61.538	Colobus_angolensis_palliatus
ENSPSIG00000003043	PYM1	94	64.039	ENSCANG00000020338	-	94	62.687	Colobus_angolensis_palliatus
ENSPSIG00000003043	PYM1	94	54.229	ENSCGRG00001004231	-	93	54.680	Cricetulus_griseus_chok1gshd
ENSPSIG00000003043	PYM1	94	60.697	ENSCGRG00001018051	-	94	60.591	Cricetulus_griseus_chok1gshd
ENSPSIG00000003043	PYM1	93	59.799	ENSCGRG00000012495	-	93	59.799	Cricetulus_griseus_crigri
ENSPSIG00000003043	PYM1	94	54.229	ENSCGRG00000018933	-	93	54.680	Cricetulus_griseus_crigri
ENSPSIG00000003043	PYM1	94	55.714	ENSCSEG00000021531	pym1	94	57.843	Cynoglossus_semilaevis
ENSPSIG00000003043	PYM1	96	59.330	ENSCVAG00000017360	pym1	81	58.586	Cyprinodon_variegatus
ENSPSIG00000003043	PYM1	99	50.718	ENSDARG00000046024	pym1	94	50.490	Danio_rerio
ENSPSIG00000003043	PYM1	90	63.542	ENSDNOG00000048414	PYM1	81	63.542	Dasypus_novemcinctus
ENSPSIG00000003043	PYM1	94	63.725	ENSDORG00000029448	Pym1	94	63.592	Dipodomys_ordii
ENSPSIG00000003043	PYM1	90	60.104	ENSETEG00000004461	-	94	60.104	Echinops_telfairi
ENSPSIG00000003043	PYM1	89	64.171	ENSEASG00005002271	PYM1	81	64.171	Equus_asinus_asinus
ENSPSIG00000003043	PYM1	90	66.146	ENSECAG00000011870	PYM1	89	66.146	Equus_caballus
ENSPSIG00000003043	PYM1	96	56.098	ENSELUG00000024250	pym1	94	56.931	Esox_lucius
ENSPSIG00000003043	PYM1	93	65.327	ENSFCAG00000013967	PYM1	93	64.975	Felis_catus
ENSPSIG00000003043	PYM1	90	65.969	ENSFDAG00000006314	PYM1	93	64.677	Fukomys_damarensis
ENSPSIG00000003043	PYM1	94	55.340	ENSFHEG00000005884	pym1	94	55.340	Fundulus_heteroclitus
ENSPSIG00000003043	PYM1	90	57.513	ENSGMOG00000007239	pym1	89	58.549	Gadus_morhua
ENSPSIG00000003043	PYM1	94	77.000	ENSGALG00000046169	PYM1	94	77.500	Gallus_gallus
ENSPSIG00000003043	PYM1	99	55.111	ENSGAFG00000003280	pym1	93	56.098	Gambusia_affinis
ENSPSIG00000003043	PYM1	99	51.429	ENSGACG00000010703	pym1	94	51.741	Gasterosteus_aculeatus
ENSPSIG00000003043	PYM1	91	91.237	ENSGAGG00000001973	PYM1	85	91.237	Gopherus_agassizii
ENSPSIG00000003043	PYM1	94	63.725	ENSGGOG00000043246	PYM1	94	63.592	Gorilla_gorilla
ENSPSIG00000003043	PYM1	94	55.981	ENSHBUG00000012719	pym1	94	55.072	Haplochromis_burtoni
ENSPSIG00000003043	PYM1	94	63.819	ENSHGLG00000017155	PYM1	91	63.819	Heterocephalus_glaber_female
ENSPSIG00000003043	PYM1	90	65.079	ENSHGLG00100015341	PYM1	94	64.894	Heterocephalus_glaber_male
ENSPSIG00000003043	PYM1	99	53.881	ENSHCOG00000007987	pym1	81	53.589	Hippocampus_comes
ENSPSIG00000003043	PYM1	100	51.584	ENSIPUG00000005975	wibga	94	52.153	Ictalurus_punctatus
ENSPSIG00000003043	PYM1	90	65.445	ENSSTOG00000014206	PYM1	92	64.583	Ictidomys_tridecemlineatus
ENSPSIG00000003043	PYM1	92	61.929	ENSJJAG00000013338	Pym1	94	61.194	Jaculus_jaculus
ENSPSIG00000003043	PYM1	100	49.345	ENSKMAG00000006351	pym1	95	53.456	Kryptolebias_marmoratus
ENSPSIG00000003043	PYM1	99	58.140	ENSLBEG00000015707	pym1	93	58.209	Labrus_bergylta
ENSPSIG00000003043	PYM1	90	63.265	ENSLACG00000014398	PYM1	89	63.776	Latimeria_chalumnae
ENSPSIG00000003043	PYM1	91	64.767	ENSLAFG00000002369	PYM1	89	65.969	Loxodonta_africana
ENSPSIG00000003043	PYM1	94	64.039	ENSMFAG00000003048	PYM1	94	62.687	Macaca_fascicularis
ENSPSIG00000003043	PYM1	90	64.398	ENSMMUG00000011002	PYM1	94	62.000	Macaca_mulatta
ENSPSIG00000003043	PYM1	94	64.039	ENSMNEG00000034677	PYM1	94	62.687	Macaca_nemestrina
ENSPSIG00000003043	PYM1	94	63.547	ENSMLEG00000007971	PYM1	94	62.189	Mandrillus_leucophaeus
ENSPSIG00000003043	PYM1	99	56.696	ENSMAMG00000001588	pym1	94	56.190	Mastacembelus_armatus
ENSPSIG00000003043	PYM1	94	55.981	ENSMZEG00005026458	pym1	94	55.072	Maylandia_zebra
ENSPSIG00000003043	PYM1	94	62.189	ENSMAUG00000007318	Pym1	94	62.189	Mesocricetus_auratus
ENSPSIG00000003043	PYM1	94	64.851	ENSMICG00000032962	PYM1	94	64.851	Microcebus_murinus
ENSPSIG00000003043	PYM1	94	61.194	ENSMOCG00000010208	Pym1	94	61.692	Microtus_ochrogaster
ENSPSIG00000003043	PYM1	99	53.521	ENSMMOG00000009301	pym1	92	55.276	Mola_mola
ENSPSIG00000003043	PYM1	99	52.315	ENSMALG00000013496	pym1	94	56.098	Monopterus_albus
ENSPSIG00000003043	PYM1	94	60.697	MGP_CAROLIEiJ_G0015953	Pym1	94	60.697	Mus_caroli
ENSPSIG00000003043	PYM1	94	61.692	ENSMUSG00000064030	Pym1	94	61.692	Mus_musculus
ENSPSIG00000003043	PYM1	93	61.463	MGP_PahariEiJ_G0031131	Pym1	93	61.353	Mus_pahari
ENSPSIG00000003043	PYM1	94	61.692	MGP_SPRETEiJ_G0016778	Pym1	94	61.692	Mus_spretus
ENSPSIG00000003043	PYM1	90	65.445	ENSMPUG00000000931	PYM1	89	65.079	Mustela_putorius_furo
ENSPSIG00000003043	PYM1	91	63.021	ENSMLUG00000003586	PYM1	91	63.021	Myotis_lucifugus
ENSPSIG00000003043	PYM1	90	63.542	ENSNGAG00000019207	Pym1	88	63.542	Nannospalax_galili
ENSPSIG00000003043	PYM1	99	56.818	ENSNBRG00000006951	pym1	94	55.072	Neolamprologus_brichardi
ENSPSIG00000003043	PYM1	94	64.390	ENSNLEG00000017588	PYM1	94	64.251	Nomascus_leucogenys
ENSPSIG00000003043	PYM1	89	61.497	ENSMEUG00000001017	PYM1	93	61.290	Notamacropus_eugenii
ENSPSIG00000003043	PYM1	94	61.836	ENSOPRG00000007797	PYM1	94	61.836	Ochotona_princeps
ENSPSIG00000003043	PYM1	92	62.755	ENSODEG00000004289	PYM1	92	62.121	Octodon_degus
ENSPSIG00000003043	PYM1	94	54.245	ENSONIG00000016740	pym1	94	53.333	Oreochromis_niloticus
ENSPSIG00000003043	PYM1	91	63.021	ENSOCUG00000025969	PYM1	82	63.021	Oryctolagus_cuniculus
ENSPSIG00000003043	PYM1	99	59.070	ENSORLG00000030592	pym1	94	58.621	Oryzias_latipes
ENSPSIG00000003043	PYM1	99	55.300	ENSORLG00020011264	pym1	94	57.767	Oryzias_latipes_hni
ENSPSIG00000003043	PYM1	99	59.346	ENSORLG00015005287	pym1	94	58.911	Oryzias_latipes_hsok
ENSPSIG00000003043	PYM1	99	57.009	ENSOMEG00000022250	pym1	94	56.784	Oryzias_melastigma
ENSPSIG00000003043	PYM1	94	63.317	ENSOGAG00000007038	PYM1	93	63.184	Otolemur_garnettii
ENSPSIG00000003043	PYM1	91	64.103	ENSOARG00000010856	PYM1	91	64.103	Ovis_aries
ENSPSIG00000003043	PYM1	94	64.390	ENSPPAG00000043630	PYM1	94	64.251	Pan_paniscus
ENSPSIG00000003043	PYM1	93	65.327	ENSPPRG00000013243	PYM1	93	65.327	Panthera_pardus
ENSPSIG00000003043	PYM1	93	65.990	ENSPTIG00000017380	PYM1	93	65.990	Panthera_tigris_altaica
ENSPSIG00000003043	PYM1	94	64.390	ENSPTRG00000005067	PYM1	94	64.251	Pan_troglodytes
ENSPSIG00000003043	PYM1	94	64.179	ENSPANG00000009562	PYM1	94	64.179	Papio_anubis
ENSPSIG00000003043	PYM1	100	60.185	ENSPKIG00000006301	pym1	94	58.824	Paramormyrops_kingsleyae
ENSPSIG00000003043	PYM1	100	57.277	ENSPMGG00000023161	pym1	94	56.716	Periophthalmus_magnuspinnatus
ENSPSIG00000003043	PYM1	94	60.697	ENSPEMG00000009372	Pym1	94	61.692	Peromyscus_maniculatus_bairdii
ENSPSIG00000003043	PYM1	89	62.567	ENSPCIG00000024658	PYM1	87	62.434	Phascolarctos_cinereus
ENSPSIG00000003043	PYM1	99	56.951	ENSPFOG00000008193	pym1	93	58.333	Poecilia_formosa
ENSPSIG00000003043	PYM1	99	56.951	ENSPLAG00000009228	pym1	93	58.333	Poecilia_latipinna
ENSPSIG00000003043	PYM1	99	56.951	ENSPMEG00000001505	pym1	93	58.333	Poecilia_mexicana
ENSPSIG00000003043	PYM1	94	63.902	ENSPPYG00000004635	PYM1	94	63.768	Pongo_abelii
ENSPSIG00000003043	PYM1	94	64.851	ENSPCOG00000019706	PYM1	94	63.942	Propithecus_coquereli
ENSPSIG00000003043	PYM1	94	63.682	ENSPVAG00000011437	PYM1	94	63.547	Pteropus_vampyrus
ENSPSIG00000003043	PYM1	94	56.311	ENSPNYG00000012871	pym1	94	55.825	Pundamilia_nyererei
ENSPSIG00000003043	PYM1	100	50.222	ENSPNAG00000018833	pym1	94	54.930	Pygocentrus_nattereri
ENSPSIG00000003043	PYM1	94	60.697	ENSRNOG00000058130	Pym1	94	62.871	Rattus_norvegicus
ENSPSIG00000003043	PYM1	94	59.420	ENSRBIG00000033362	PYM1	94	59.420	Rhinopithecus_bieti
ENSPSIG00000003043	PYM1	94	63.547	ENSRROG00000043620	PYM1	94	62.069	Rhinopithecus_roxellana
ENSPSIG00000003043	PYM1	94	64.390	ENSSBOG00000029393	PYM1	94	64.251	Saimiri_boliviensis_boliviensis
ENSPSIG00000003043	PYM1	89	63.102	ENSSHAG00000008280	PYM1	88	63.102	Sarcophilus_harrisii
ENSPSIG00000003043	PYM1	93	59.000	ENSSFOG00015021475	pym1	94	57.789	Scleropages_formosus
ENSPSIG00000003043	PYM1	99	56.221	ENSSMAG00000020912	pym1	94	56.311	Scophthalmus_maximus
ENSPSIG00000003043	PYM1	99	53.846	ENSSDUG00000001807	pym1	94	53.810	Seriola_dumerili
ENSPSIG00000003043	PYM1	99	56.338	ENSSLDG00000013730	pym1	94	55.941	Seriola_lalandi_dorsalis
ENSPSIG00000003043	PYM1	90	62.963	ENSSARG00000009569	PYM1	94	64.550	Sorex_araneus
ENSPSIG00000003043	PYM1	99	74.654	ENSSPUG00000015059	PYM1	94	73.659	Sphenodon_punctatus
ENSPSIG00000003043	PYM1	99	54.128	ENSSPAG00000020100	pym1	94	54.545	Stegastes_partitus
ENSPSIG00000003043	PYM1	90	67.010	ENSSSCG00000040825	PYM1	89	67.010	Sus_scrofa
ENSPSIG00000003043	PYM1	99	56.279	ENSTRUG00000021367	pym1	93	57.214	Takifugu_rubripes
ENSPSIG00000003043	PYM1	99	54.245	ENSTNIG00000012534	pym1	92	53.081	Tetraodon_nigroviridis
ENSPSIG00000003043	PYM1	90	60.417	ENSTBEG00000004208	PYM1	94	60.417	Tupaia_belangeri
ENSPSIG00000003043	PYM1	94	64.390	ENSTTRG00000014971	PYM1	94	65.025	Tursiops_truncatus
ENSPSIG00000003043	PYM1	90	63.731	ENSUAMG00000014521	PYM1	89	63.731	Ursus_americanus
ENSPSIG00000003043	PYM1	90	63.402	ENSUMAG00000016241	PYM1	81	63.021	Ursus_maritimus
ENSPSIG00000003043	PYM1	93	64.286	ENSVVUG00000022749	PYM1	89	65.608	Vulpes_vulpes
ENSPSIG00000003043	PYM1	94	59.701	ENSXETG00000021850	pym1	94	61.692	Xenopus_tropicalis
ENSPSIG00000003043	PYM1	99	56.502	ENSXMAG00000011649	pym1	93	57.635	Xiphophorus_maculatus