EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000003158 (Gene tree)
Gene ID: 102464009
Gene Symbol: SF3B2
Alias: -
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 15877 bases
Position: chrJH210532.1:1295352-1311228
Accession: 102464009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003304	DUF382	PF04037.13	8.6e-60	1	1
ENSPSIP00000003306	DUF382	PF04037.13	8.9e-60	1	1
ENSPSIP00000003303	DUF382	PF04037.13	1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003319	SF3B2-202	2401	-	ENSPSIP00000003304	739 (aa)	-	K7F5J4
ENSPSIT00000003318	SF3B2-201	2635	XM_006129715	ENSPSIP00000003303	817 (aa)	-	K7F5J3
ENSPSIT00000003321	SF3B2-203	3794	-	ENSPSIP00000003306	757 (aa)	XP_025043832	K7F5J6

Gene Model

Click here to download ENSPSIG00000003158's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003158	SF3B2	100	88.493	ENSG00000087365	SF3B2	99	96.508	Homo_sapiens
ENSPSIG00000003158	SF3B2	94	72.654	ENSAPOG00000001974	sf3b2	82	73.035	Acanthochromis_polyacanthus
ENSPSIG00000003158	SF3B2	100	87.702	ENSAMEG00000017206	SF3B2	93	82.346	Ailuropoda_melanoleuca
ENSPSIG00000003158	SF3B2	97	75.658	ENSACIG00000000624	sf3b2	87	74.031	Amphilophus_citrinellus
ENSPSIG00000003158	SF3B2	97	74.672	ENSAOCG00000009207	sf3b2	86	74.935	Amphiprion_ocellaris
ENSPSIG00000003158	SF3B2	97	74.803	ENSAPEG00000002762	sf3b2	87	72.704	Amphiprion_percula
ENSPSIG00000003158	SF3B2	92	78.293	ENSACAG00000008615	SF3B2	94	67.723	Anolis_carolinensis
ENSPSIG00000003158	SF3B2	100	88.493	ENSANAG00000029120	SF3B2	93	80.833	Aotus_nancymaae
ENSPSIG00000003158	SF3B2	97	75.393	ENSACLG00000014771	sf3b2	87	74.574	Astatotilapia_calliptera
ENSPSIG00000003158	SF3B2	97	73.113	ENSAMXG00000007929	sf3b2	86	79.048	Astyanax_mexicanus
ENSPSIG00000003158	SF3B2	100	88.655	ENSBTAG00000002778	SF3B2	93	82.681	Bos_taurus
ENSPSIG00000003158	SF3B2	73	50.704	WBGene00021004	sftb-2	91	50.704	Caenorhabditis_elegans
ENSPSIG00000003158	SF3B2	100	88.493	ENSCJAG00000001656	SF3B2	93	80.714	Callithrix_jacchus
ENSPSIG00000003158	SF3B2	100	87.682	ENSCAFG00000013033	SF3B2	93	82.325	Canis_familiaris
ENSPSIG00000003158	SF3B2	100	87.682	ENSCAFG00020015382	SF3B2	93	82.325	Canis_lupus_dingo
ENSPSIG00000003158	SF3B2	100	87.844	ENSCHIG00000011211	SF3B2	93	82.325	Capra_hircus
ENSPSIG00000003158	SF3B2	100	87.520	ENSTSYG00000000959	SF3B2	93	80.833	Carlito_syrichta
ENSPSIG00000003158	SF3B2	67	70.423	ENSCAPG00000006065	SF3B2	95	95.763	Cavia_aperea
ENSPSIG00000003158	SF3B2	89	87.103	ENSCPOG00000008294	SF3B2	93	78.232	Cavia_porcellus
ENSPSIG00000003158	SF3B2	100	88.493	ENSCCAG00000035256	SF3B2	93	80.714	Cebus_capucinus
ENSPSIG00000003158	SF3B2	100	88.493	ENSCATG00000042240	SF3B2	93	80.595	Cercocebus_atys
ENSPSIG00000003158	SF3B2	100	88.493	ENSCLAG00000016852	SF3B2	93	80.476	Chinchilla_lanigera
ENSPSIG00000003158	SF3B2	100	88.493	ENSCSAG00000008121	SF3B2	84	88.655	Chlorocebus_sabaeus
ENSPSIG00000003158	SF3B2	91	96.907	ENSCHOG00000001476	SF3B2	86	89.175	Choloepus_hoffmanni
ENSPSIG00000003158	SF3B2	100	96.078	ENSCPBG00000022465	SF3B2	99	97.476	Chrysemys_picta_bellii
ENSPSIG00000003158	SF3B2	85	61.883	ENSCING00000005665	-	99	62.480	Ciona_intestinalis
ENSPSIG00000003158	SF3B2	82	61.792	ENSCSAVG00000002029	-	99	61.224	Ciona_savignyi
ENSPSIG00000003158	SF3B2	100	88.493	ENSCANG00000039680	SF3B2	93	80.595	Colobus_angolensis_palliatus
ENSPSIG00000003158	SF3B2	100	88.006	ENSCGRG00001015741	Sf3b2	93	82.388	Cricetulus_griseus_chok1gshd
ENSPSIG00000003158	SF3B2	100	88.006	ENSCGRG00000018110	Sf3b2	93	82.388	Cricetulus_griseus_crigri
ENSPSIG00000003158	SF3B2	99	69.404	ENSCSEG00000000230	sf3b2	78	79.745	Cynoglossus_semilaevis
ENSPSIG00000003158	SF3B2	97	75.499	ENSCVAG00000003357	sf3b2	86	74.733	Cyprinodon_variegatus
ENSPSIG00000003158	SF3B2	95	75.275	ENSDARG00000018049	sf3b2	86	74.689	Danio_rerio
ENSPSIG00000003158	SF3B2	100	87.520	ENSDNOG00000009484	SF3B2	96	84.197	Dasypus_novemcinctus
ENSPSIG00000003158	SF3B2	97	84.739	ENSDORG00000002495	Sf3b2	93	82.812	Dipodomys_ordii
ENSPSIG00000003158	SF3B2	84	87.731	ENSETEG00000020284	SF3B2	79	87.731	Echinops_telfairi
ENSPSIG00000003158	SF3B2	99	62.672	ENSEBUG00000013703	sf3b2	82	66.489	Eptatretus_burgeri
ENSPSIG00000003158	SF3B2	100	87.844	ENSEASG00005004508	SF3B2	93	82.109	Equus_asinus_asinus
ENSPSIG00000003158	SF3B2	100	87.844	ENSECAG00000024461	SF3B2	93	82.109	Equus_caballus
ENSPSIG00000003158	SF3B2	62	96.610	ENSEEUG00000014278	-	53	96.610	Erinaceus_europaeus
ENSPSIG00000003158	SF3B2	91	85.234	ENSELUG00000005586	sf3b2	73	86.506	Esox_lucius
ENSPSIG00000003158	SF3B2	100	87.844	ENSFCAG00000013289	SF3B2	93	84.140	Felis_catus
ENSPSIG00000003158	SF3B2	89	74.189	ENSFALG00000014653	SF3B2	89	76.741	Ficedula_albicollis
ENSPSIG00000003158	SF3B2	100	88.045	ENSFDAG00000019806	SF3B2	93	80.355	Fukomys_damarensis
ENSPSIG00000003158	SF3B2	99	73.609	ENSFHEG00000020968	sf3b2	86	74.335	Fundulus_heteroclitus
ENSPSIG00000003158	SF3B2	85	79.326	ENSGMOG00000012131	sf3b2	96	81.417	Gadus_morhua
ENSPSIG00000003158	SF3B2	91	89.225	ENSGAFG00000001675	sf3b2	86	75.464	Gambusia_affinis
ENSPSIG00000003158	SF3B2	85	78.955	ENSGACG00000019012	sf3b2	96	80.442	Gasterosteus_aculeatus
ENSPSIG00000003158	SF3B2	100	97.632	ENSGAGG00000023916	SF3B2	94	95.976	Gopherus_agassizii
ENSPSIG00000003158	SF3B2	100	88.493	ENSGGOG00000028448	SF3B2	93	96.884	Gorilla_gorilla
ENSPSIG00000003158	SF3B2	97	75.393	ENSHBUG00000017349	sf3b2	87	74.574	Haplochromis_burtoni
ENSPSIG00000003158	SF3B2	100	88.493	ENSHGLG00000010807	SF3B2	93	80.595	Heterocephalus_glaber_female
ENSPSIG00000003158	SF3B2	100	88.493	ENSHGLG00100006361	SF3B2	93	80.595	Heterocephalus_glaber_male
ENSPSIG00000003158	SF3B2	90	83.273	ENSHCOG00000016203	sf3b2	87	70.844	Hippocampus_comes
ENSPSIG00000003158	SF3B2	97	71.410	ENSIPUG00000009383	sf3b2	83	73.342	Ictalurus_punctatus
ENSPSIG00000003158	SF3B2	100	87.520	ENSSTOG00000028892	SF3B2	93	80.714	Ictidomys_tridecemlineatus
ENSPSIG00000003158	SF3B2	100	87.844	ENSJJAG00000018193	Sf3b2	93	80.902	Jaculus_jaculus
ENSPSIG00000003158	SF3B2	84	88.889	ENSKMAG00000020181	sf3b2	86	73.281	Kryptolebias_marmoratus
ENSPSIG00000003158	SF3B2	99	74.252	ENSLBEG00000027739	sf3b2	89	80.000	Labrus_bergylta
ENSPSIG00000003158	SF3B2	83	84.094	ENSLACG00000010429	SF3B2	83	83.937	Latimeria_chalumnae
ENSPSIG00000003158	SF3B2	100	87.844	ENSLAFG00000002128	SF3B2	93	83.535	Loxodonta_africana
ENSPSIG00000003158	SF3B2	100	88.350	ENSMFAG00000003064	SF3B2	93	80.499	Macaca_fascicularis
ENSPSIG00000003158	SF3B2	100	82.982	ENSMMUG00000011743	SF3B2	93	77.153	Macaca_mulatta
ENSPSIG00000003158	SF3B2	100	88.493	ENSMNEG00000034437	SF3B2	93	80.546	Macaca_nemestrina
ENSPSIG00000003158	SF3B2	100	88.493	ENSMLEG00000029373	SF3B2	93	80.546	Mandrillus_leucophaeus
ENSPSIG00000003158	SF3B2	97	73.514	ENSMAMG00000014103	sf3b2	86	74.252	Mastacembelus_armatus
ENSPSIG00000003158	SF3B2	97	75.393	ENSMZEG00005020789	sf3b2	86	74.574	Maylandia_zebra
ENSPSIG00000003158	SF3B2	57	95.556	ENSMAUG00000017040	Sf3b2	89	95.556	Mesocricetus_auratus
ENSPSIG00000003158	SF3B2	100	86.088	ENSMICG00000016942	-	93	80.073	Microcebus_murinus
ENSPSIG00000003158	SF3B2	100	88.331	ENSMICG00000008565	-	94	80.783	Microcebus_murinus
ENSPSIG00000003158	SF3B2	100	87.682	ENSMOCG00000003136	Sf3b2	93	82.027	Microtus_ochrogaster
ENSPSIG00000003158	SF3B2	100	71.903	ENSMMOG00000012928	sf3b2	86	72.596	Mola_mola
ENSPSIG00000003158	SF3B2	83	83.229	ENSMODG00000025020	-	100	82.288	Monodelphis_domestica
ENSPSIG00000003158	SF3B2	98	87.054	ENSMODG00000008490	-	95	86.044	Monodelphis_domestica
ENSPSIG00000003158	SF3B2	99	73.107	ENSMALG00000015137	sf3b2	75	80.560	Monopterus_albus
ENSPSIG00000003158	SF3B2	97	83.400	MGP_CAROLIEiJ_G0022539	Sf3b2	93	81.062	Mus_caroli
ENSPSIG00000003158	SF3B2	100	88.006	ENSMUSG00000024853	Sf3b2	93	82.388	Mus_musculus
ENSPSIG00000003158	SF3B2	100	87.844	MGP_PahariEiJ_G0014036	Sf3b2	93	82.388	Mus_pahari
ENSPSIG00000003158	SF3B2	100	88.006	MGP_SPRETEiJ_G0023453	Sf3b2	93	82.388	Mus_spretus
ENSPSIG00000003158	SF3B2	100	87.682	ENSMPUG00000011349	SF3B2	93	82.325	Mustela_putorius_furo
ENSPSIG00000003158	SF3B2	100	88.006	ENSMLUG00000011136	SF3B2	93	81.969	Myotis_lucifugus
ENSPSIG00000003158	SF3B2	100	87.682	ENSNGAG00000012103	Sf3b2	93	80.810	Nannospalax_galili
ENSPSIG00000003158	SF3B2	100	84.185	ENSNLEG00000006007	SF3B2	94	75.972	Nomascus_leucogenys
ENSPSIG00000003158	SF3B2	91	90.909	ENSMEUG00000000019	SF3B2	89	90.909	Notamacropus_eugenii
ENSPSIG00000003158	SF3B2	100	83.468	ENSODEG00000017764	SF3B2	93	77.143	Octodon_degus
ENSPSIG00000003158	SF3B2	98	76.802	ENSONIG00000013068	sf3b2	87	75.619	Oreochromis_niloticus
ENSPSIG00000003158	SF3B2	97	78.864	ENSOANG00000012482	SF3B2	100	76.688	Ornithorhynchus_anatinus
ENSPSIG00000003158	SF3B2	93	86.548	ENSOCUG00000015722	-	92	78.456	Oryctolagus_cuniculus
ENSPSIG00000003158	SF3B2	71	53.061	ENSOCUG00000024154	-	100	51.282	Oryctolagus_cuniculus
ENSPSIG00000003158	SF3B2	99	73.265	ENSORLG00000008235	sf3b2	85	73.448	Oryzias_latipes
ENSPSIG00000003158	SF3B2	99	73.265	ENSORLG00020005357	sf3b2	88	73.448	Oryzias_latipes_hni
ENSPSIG00000003158	SF3B2	94	81.006	ENSORLG00015022454	sf3b2	77	85.844	Oryzias_latipes_hsok
ENSPSIG00000003158	SF3B2	99	73.377	ENSOMEG00000017480	sf3b2	88	73.377	Oryzias_melastigma
ENSPSIG00000003158	SF3B2	99	87.416	ENSOGAG00000005799	SF3B2	77	92.419	Otolemur_garnettii
ENSPSIG00000003158	SF3B2	100	87.844	ENSOARG00000002125	SF3B2	100	83.108	Ovis_aries
ENSPSIG00000003158	SF3B2	100	88.493	ENSPPAG00000007359	SF3B2	93	80.737	Pan_paniscus
ENSPSIG00000003158	SF3B2	100	87.844	ENSPPRG00000013334	SF3B2	93	84.140	Panthera_pardus
ENSPSIG00000003158	SF3B2	100	87.844	ENSPTIG00000015022	SF3B2	93	84.140	Panthera_tigris_altaica
ENSPSIG00000003158	SF3B2	100	88.493	ENSPTRG00000003912	SF3B2	93	80.737	Pan_troglodytes
ENSPSIG00000003158	SF3B2	100	88.493	ENSPANG00000008593	SF3B2	93	80.595	Papio_anubis
ENSPSIG00000003158	SF3B2	99	73.052	ENSPKIG00000016576	sf3b2	86	81.440	Paramormyrops_kingsleyae
ENSPSIG00000003158	SF3B2	97	67.810	ENSPMGG00000000819	sf3b2	78	76.230	Periophthalmus_magnuspinnatus
ENSPSIG00000003158	SF3B2	100	88.655	ENSPEMG00000015437	Sf3b2	93	82.630	Peromyscus_maniculatus_bairdii
ENSPSIG00000003158	SF3B2	96	80.624	ENSPEMG00000015451	-	100	71.705	Peromyscus_maniculatus_bairdii
ENSPSIG00000003158	SF3B2	100	87.419	ENSPCIG00000008381	SF3B2	97	85.048	Phascolarctos_cinereus
ENSPSIG00000003158	SF3B2	97	75.132	ENSPFOG00000002552	sf3b2	86	75.033	Poecilia_formosa
ENSPSIG00000003158	SF3B2	97	75.397	ENSPLAG00000001471	sf3b2	86	75.299	Poecilia_latipinna
ENSPSIG00000003158	SF3B2	97	75.232	ENSPMEG00000013180	sf3b2	86	75.000	Poecilia_mexicana
ENSPSIG00000003158	SF3B2	97	75.033	ENSPREG00000002665	sf3b2	93	70.525	Poecilia_reticulata
ENSPSIG00000003158	SF3B2	68	83.727	ENSPPYG00000003034	-	89	72.625	Pongo_abelii
ENSPSIG00000003158	SF3B2	100	87.844	ENSPCAG00000005129	SF3B2	93	80.569	Procavia_capensis
ENSPSIG00000003158	SF3B2	100	88.331	ENSPCOG00000025375	SF3B2	93	81.190	Propithecus_coquereli
ENSPSIG00000003158	SF3B2	61	97.807	ENSPVAG00000005466	-	84	97.807	Pteropus_vampyrus
ENSPSIG00000003158	SF3B2	96	73.118	ENSPNYG00000023594	sf3b2	92	74.409	Pundamilia_nyererei
ENSPSIG00000003158	SF3B2	100	71.464	ENSPNAG00000001891	sf3b2	75	82.119	Pygocentrus_nattereri
ENSPSIG00000003158	SF3B2	97	82.999	ENSRNOG00000020412	Sf3b2	93	80.700	Rattus_norvegicus
ENSPSIG00000003158	SF3B2	100	88.493	ENSRBIG00000034065	SF3B2	93	80.595	Rhinopithecus_bieti
ENSPSIG00000003158	SF3B2	100	88.493	ENSRROG00000034496	SF3B2	93	80.595	Rhinopithecus_roxellana
ENSPSIG00000003158	SF3B2	100	88.493	ENSSBOG00000026337	SF3B2	84	88.655	Saimiri_boliviensis_boliviensis
ENSPSIG00000003158	SF3B2	100	82.903	ENSSHAG00000010933	-	93	77.442	Sarcophilus_harrisii
ENSPSIG00000003158	SF3B2	100	68.414	ENSSHAG00000018043	-	97	65.321	Sarcophilus_harrisii
ENSPSIG00000003158	SF3B2	100	71.248	ENSSFOG00015021125	sf3b2	82	81.500	Scleropages_formosus
ENSPSIG00000003158	SF3B2	79	88.046	ENSSMAG00000004079	sf3b2	92	71.517	Scophthalmus_maximus
ENSPSIG00000003158	SF3B2	71	88.994	ENSSDUG00000008499	sf3b2	90	71.142	Seriola_dumerili
ENSPSIG00000003158	SF3B2	79	88.994	ENSSLDG00000006838	sf3b2	86	75.524	Seriola_lalandi_dorsalis
ENSPSIG00000003158	SF3B2	59	98.413	ENSSARG00000003707	-	55	98.413	Sorex_araneus
ENSPSIG00000003158	SF3B2	100	89.694	ENSSPUG00000009198	SF3B2	94	88.392	Sphenodon_punctatus
ENSPSIG00000003158	SF3B2	80	89.266	ENSSPAG00000004406	sf3b2	86	73.062	Stegastes_partitus
ENSPSIG00000003158	SF3B2	100	87.844	ENSSSCG00000012957	SF3B2	93	82.681	Sus_scrofa
ENSPSIG00000003158	SF3B2	99	66.360	ENSTRUG00000007611	sf3b2	89	72.956	Takifugu_rubripes
ENSPSIG00000003158	SF3B2	99	71.542	ENSTNIG00000007441	sf3b2	88	70.147	Tetraodon_nigroviridis
ENSPSIG00000003158	SF3B2	93	76.231	ENSTBEG00000004258	SF3B2	73	96.429	Tupaia_belangeri
ENSPSIG00000003158	SF3B2	100	87.682	ENSTTRG00000014339	SF3B2	93	82.444	Tursiops_truncatus
ENSPSIG00000003158	SF3B2	100	85.275	ENSUAMG00000020754	SF3B2	92	80.628	Ursus_americanus
ENSPSIG00000003158	SF3B2	100	87.844	ENSUMAG00000010994	SF3B2	93	82.444	Ursus_maritimus
ENSPSIG00000003158	SF3B2	68	95.763	ENSVPAG00000008695	SF3B2	72	95.763	Vicugna_pacos
ENSPSIG00000003158	SF3B2	100	87.520	ENSVVUG00000027029	SF3B2	93	82.206	Vulpes_vulpes
ENSPSIG00000003158	SF3B2	96	72.616	ENSXETG00000008422	sf3b2	81	81.359	Xenopus_tropicalis
ENSPSIG00000003158	SF3B2	94	74.716	ENSXCOG00000008943	sf3b2	97	74.074	Xiphophorus_couchianus
ENSPSIG00000003158	SF3B2	80	88.847	ENSXMAG00000008467	sf3b2	86	74.934	Xiphophorus_maculatus