EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003258 (Gene tree)
Gene ID: 102456079
Gene Symbol: RAD54L
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 29558 bases
Position: chrJH205395.1:977003-1006560
Accession: 102456079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003416	ResIII	PF04851.15	2.9e-08	1	1
ENSPSIP00000003416	DEAD	PF00270.29	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003433	RAD54L-201	3119	XM_006111461	ENSPSIP00000003416	735 (aa)	XP_006111523	K7F5V6

Gene Model

Click here to download ENSPSIG00000003258's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003258	RAD54L	89	41.499	ENSPSIG00000002383	-	82	41.414
ENSPSIG00000003258	RAD54L	69	30.502	ENSPSIG00000012595	CHD1L	50	30.409
ENSPSIG00000003258	RAD54L	64	37.811	ENSPSIG00000005462	HELLS	56	37.500
ENSPSIG00000003258	RAD54L	73	30.743	ENSPSIG00000010627	ERCC6L2	80	30.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003258	RAD54L	99	85.772	ENSG00000085999	RAD54L	100	94.667	Homo_sapiens
ENSPSIG00000003258	RAD54L	99	78.610	ENSAPOG00000011643	rad54l	99	78.610	Acanthochromis_polyacanthus
ENSPSIG00000003258	RAD54L	99	85.637	ENSAMEG00000013902	RAD54L	99	85.637	Ailuropoda_melanoleuca
ENSPSIG00000003258	RAD54L	99	80.518	ENSACIG00000001939	rad54l	98	80.518	Amphilophus_citrinellus
ENSPSIG00000003258	RAD54L	99	81.943	ENSAOCG00000017576	rad54l	98	81.943	Amphiprion_ocellaris
ENSPSIG00000003258	RAD54L	96	83.051	ENSAPEG00000020658	rad54l	98	83.051	Amphiprion_percula
ENSPSIG00000003258	RAD54L	95	83.691	ENSATEG00000006767	rad54l	99	83.691	Anabas_testudineus
ENSPSIG00000003258	RAD54L	96	93.162	ENSAPLG00000006389	RAD54L	100	93.162	Anas_platyrhynchos
ENSPSIG00000003258	RAD54L	100	91.429	ENSACAG00000002312	RAD54L	99	91.429	Anolis_carolinensis
ENSPSIG00000003258	RAD54L	99	85.772	ENSANAG00000035439	RAD54L	99	85.772	Aotus_nancymaae
ENSPSIG00000003258	RAD54L	99	79.564	ENSACLG00000018711	rad54l	99	79.564	Astatotilapia_calliptera
ENSPSIG00000003258	RAD54L	99	83.765	ENSAMXG00000012777	rad54l	99	83.765	Astyanax_mexicanus
ENSPSIG00000003258	RAD54L	99	86.198	ENSBTAG00000019901	RAD54L	99	86.198	Bos_taurus
ENSPSIG00000003258	RAD54L	94	59.424	WBGene00004298	rad-54	84	58.561	Caenorhabditis_elegans
ENSPSIG00000003258	RAD54L	97	86.517	ENSCJAG00000021080	RAD54L	90	86.517	Callithrix_jacchus
ENSPSIG00000003258	RAD54L	99	85.772	ENSCAFG00000004272	RAD54L	99	85.772	Canis_familiaris
ENSPSIG00000003258	RAD54L	99	85.772	ENSCAFG00020015066	RAD54L	99	85.772	Canis_lupus_dingo
ENSPSIG00000003258	RAD54L	99	86.333	ENSCHIG00000020118	RAD54L	99	86.333	Capra_hircus
ENSPSIG00000003258	RAD54L	99	84.688	ENSTSYG00000002032	RAD54L	99	84.688	Carlito_syrichta
ENSPSIG00000003258	RAD54L	99	86.992	ENSCPOG00000006768	RAD54L	99	86.992	Cavia_porcellus
ENSPSIG00000003258	RAD54L	99	86.043	ENSCCAG00000025783	RAD54L	99	86.043	Cebus_capucinus
ENSPSIG00000003258	RAD54L	99	86.314	ENSCATG00000030589	RAD54L	99	86.314	Cercocebus_atys
ENSPSIG00000003258	RAD54L	99	87.263	ENSCLAG00000004645	RAD54L	99	87.263	Chinchilla_lanigera
ENSPSIG00000003258	RAD54L	99	86.179	ENSCSAG00000001229	RAD54L	99	86.179	Chlorocebus_sabaeus
ENSPSIG00000003258	RAD54L	100	96.599	ENSCPBG00000005675	RAD54L	99	96.599	Chrysemys_picta_bellii
ENSPSIG00000003258	RAD54L	96	64.393	ENSCING00000024456	-	96	64.393	Ciona_intestinalis
ENSPSIG00000003258	RAD54L	99	63.046	ENSCSAVG00000010859	-	98	63.095	Ciona_savignyi
ENSPSIG00000003258	RAD54L	99	86.043	ENSCANG00000034891	RAD54L	99	86.043	Colobus_angolensis_palliatus
ENSPSIG00000003258	RAD54L	99	84.959	ENSCGRG00001014807	Rad54l	99	84.959	Cricetulus_griseus_chok1gshd
ENSPSIG00000003258	RAD54L	99	84.959	ENSCGRG00000016038	Rad54l	99	84.959	Cricetulus_griseus_crigri
ENSPSIG00000003258	RAD54L	99	79.268	ENSCSEG00000001983	rad54l	99	79.268	Cynoglossus_semilaevis
ENSPSIG00000003258	RAD54L	78	82.800	ENSCVAG00000019561	rad54l	99	82.800	Cyprinodon_variegatus
ENSPSIG00000003258	RAD54L	99	81.199	ENSDARG00000018623	rad54l	99	81.199	Danio_rerio
ENSPSIG00000003258	RAD54L	99	87.127	ENSDNOG00000003395	RAD54L	99	87.127	Dasypus_novemcinctus
ENSPSIG00000003258	RAD54L	99	78.378	ENSDORG00000002632	Rad54l	99	78.290	Dipodomys_ordii
ENSPSIG00000003258	RAD54L	92	58.910	FBgn0002989	okr	86	58.910	Drosophila_melanogaster
ENSPSIG00000003258	RAD54L	77	87.333	ENSETEG00000000550	RAD54L	77	87.333	Echinops_telfairi
ENSPSIG00000003258	RAD54L	99	86.179	ENSEASG00005004511	RAD54L	99	86.179	Equus_asinus_asinus
ENSPSIG00000003258	RAD54L	99	86.585	ENSECAG00000008760	RAD54L	98	87.703	Equus_caballus
ENSPSIG00000003258	RAD54L	92	87.870	ENSEEUG00000008113	RAD54L	90	87.870	Erinaceus_europaeus
ENSPSIG00000003258	RAD54L	99	82.249	ENSELUG00000002295	rad54l	99	82.249	Esox_lucius
ENSPSIG00000003258	RAD54L	99	85.230	ENSFCAG00000003444	RAD54L	99	85.230	Felis_catus
ENSPSIG00000003258	RAD54L	100	90.625	ENSFALG00000009480	RAD54L	99	90.897	Ficedula_albicollis
ENSPSIG00000003258	RAD54L	99	86.043	ENSFDAG00000007806	RAD54L	99	86.043	Fukomys_damarensis
ENSPSIG00000003258	RAD54L	62	79.691	ENSFHEG00000009824	rad54l	78	79.691	Fundulus_heteroclitus
ENSPSIG00000003258	RAD54L	99	81.199	ENSGMOG00000014568	rad54l	99	81.199	Gadus_morhua
ENSPSIG00000003258	RAD54L	100	91.565	ENSGALG00000010356	RAD54L	91	91.565	Gallus_gallus
ENSPSIG00000003258	RAD54L	91	80.120	ENSGAFG00000011110	rad54l	99	80.120	Gambusia_affinis
ENSPSIG00000003258	RAD54L	99	80.952	ENSGACG00000003111	rad54l	96	80.952	Gasterosteus_aculeatus
ENSPSIG00000003258	RAD54L	100	96.054	ENSGAGG00000014089	RAD54L	95	96.054	Gopherus_agassizii
ENSPSIG00000003258	RAD54L	99	85.637	ENSGGOG00000010602	RAD54L	99	85.637	Gorilla_gorilla
ENSPSIG00000003258	RAD54L	99	79.837	ENSHBUG00000007793	rad54l	99	79.837	Haplochromis_burtoni
ENSPSIG00000003258	RAD54L	99	86.585	ENSHGLG00000000753	RAD54L	99	86.585	Heterocephalus_glaber_female
ENSPSIG00000003258	RAD54L	99	86.450	ENSHGLG00100016987	RAD54L	99	86.450	Heterocephalus_glaber_male
ENSPSIG00000003258	RAD54L	97	82.378	ENSIPUG00000015999	rad54l	99	83.885	Ictalurus_punctatus
ENSPSIG00000003258	RAD54L	99	86.043	ENSSTOG00000029125	RAD54L	99	86.043	Ictidomys_tridecemlineatus
ENSPSIG00000003258	RAD54L	99	69.919	ENSJJAG00000000235	-	98	69.783	Jaculus_jaculus
ENSPSIG00000003258	RAD54L	99	80.654	ENSKMAG00000009944	rad54l	99	80.654	Kryptolebias_marmoratus
ENSPSIG00000003258	RAD54L	99	81.831	ENSLBEG00000014617	rad54l	97	84.673	Labrus_bergylta
ENSPSIG00000003258	RAD54L	99	82.970	ENSLOCG00000004144	rad54l	99	85.113	Lepisosteus_oculatus
ENSPSIG00000003258	RAD54L	99	87.127	ENSLAFG00000007583	RAD54L	99	87.398	Loxodonta_africana
ENSPSIG00000003258	RAD54L	99	86.450	ENSMFAG00000031241	RAD54L	99	86.450	Macaca_fascicularis
ENSPSIG00000003258	RAD54L	99	86.450	ENSMMUG00000011568	RAD54L	99	86.450	Macaca_mulatta
ENSPSIG00000003258	RAD54L	99	86.179	ENSMNEG00000038562	RAD54L	99	86.179	Macaca_nemestrina
ENSPSIG00000003258	RAD54L	99	86.314	ENSMLEG00000038145	RAD54L	99	86.314	Mandrillus_leucophaeus
ENSPSIG00000003258	RAD54L	99	81.421	ENSMAMG00000022180	rad54l	99	84.490	Mastacembelus_armatus
ENSPSIG00000003258	RAD54L	99	79.564	ENSMZEG00005018081	rad54l	99	79.564	Maylandia_zebra
ENSPSIG00000003258	RAD54L	100	91.565	ENSMGAG00000010634	RAD54L	99	91.565	Meleagris_gallopavo
ENSPSIG00000003258	RAD54L	99	85.366	ENSMAUG00000020076	Rad54l	99	85.366	Mesocricetus_auratus
ENSPSIG00000003258	RAD54L	99	86.314	ENSMICG00000003266	RAD54L	99	86.314	Microcebus_murinus
ENSPSIG00000003258	RAD54L	99	85.908	ENSMOCG00000001778	Rad54l	99	85.908	Microtus_ochrogaster
ENSPSIG00000003258	RAD54L	99	78.639	ENSMALG00000021148	rad54l	99	78.639	Monopterus_albus
ENSPSIG00000003258	RAD54L	99	80.764	MGP_CAROLIEiJ_G0026325	Rad54l	99	80.764	Mus_caroli
ENSPSIG00000003258	RAD54L	99	85.501	ENSMUSG00000028702	Rad54l	99	85.501	Mus_musculus
ENSPSIG00000003258	RAD54L	99	85.230	MGP_PahariEiJ_G0028657	Rad54l	99	85.230	Mus_pahari
ENSPSIG00000003258	RAD54L	99	85.637	MGP_SPRETEiJ_G0027297	Rad54l	99	85.637	Mus_spretus
ENSPSIG00000003258	RAD54L	99	85.521	ENSMPUG00000012883	RAD54L	99	85.521	Mustela_putorius_furo
ENSPSIG00000003258	RAD54L	99	86.585	ENSMLUG00000003763	RAD54L	99	86.585	Myotis_lucifugus
ENSPSIG00000003258	RAD54L	99	84.688	ENSNGAG00000024213	Rad54l	99	84.688	Nannospalax_galili
ENSPSIG00000003258	RAD54L	99	85.366	ENSNLEG00000016548	RAD54L	99	85.366	Nomascus_leucogenys
ENSPSIG00000003258	RAD54L	92	85.141	ENSMEUG00000006793	RAD54L	99	85.141	Notamacropus_eugenii
ENSPSIG00000003258	RAD54L	90	85.263	ENSOPRG00000016016	RAD54L	89	85.263	Ochotona_princeps
ENSPSIG00000003258	RAD54L	99	86.856	ENSODEG00000008519	RAD54L	99	86.856	Octodon_degus
ENSPSIG00000003258	RAD54L	99	79.564	ENSONIG00000007659	rad54l	99	79.564	Oreochromis_niloticus
ENSPSIG00000003258	RAD54L	99	86.179	ENSOCUG00000005229	RAD54L	99	86.179	Oryctolagus_cuniculus
ENSPSIG00000003258	RAD54L	99	79.809	ENSORLG00000002958	rad54l	98	80.218	Oryzias_latipes
ENSPSIG00000003258	RAD54L	100	80.272	ENSORLG00020006554	rad54l	99	83.407	Oryzias_latipes_hni
ENSPSIG00000003258	RAD54L	94	83.285	ENSORLG00015002907	rad54l	99	80.491	Oryzias_latipes_hsok
ENSPSIG00000003258	RAD54L	99	80.355	ENSOMEG00000007770	rad54l	98	80.355	Oryzias_melastigma
ENSPSIG00000003258	RAD54L	99	85.946	ENSOARG00000002264	RAD54L	99	85.946	Ovis_aries
ENSPSIG00000003258	RAD54L	99	85.908	ENSPPAG00000031222	RAD54L	99	85.908	Pan_paniscus
ENSPSIG00000003258	RAD54L	99	85.230	ENSPPRG00000010317	RAD54L	99	85.230	Panthera_pardus
ENSPSIG00000003258	RAD54L	99	85.230	ENSPTIG00000012200	RAD54L	99	85.230	Panthera_tigris_altaica
ENSPSIG00000003258	RAD54L	99	85.637	ENSPTRG00000000689	RAD54L	99	85.637	Pan_troglodytes
ENSPSIG00000003258	RAD54L	99	86.314	ENSPANG00000016295	RAD54L	99	86.314	Papio_anubis
ENSPSIG00000003258	RAD54L	98	77.531	ENSPKIG00000016172	rad54l	97	77.531	Paramormyrops_kingsleyae
ENSPSIG00000003258	RAD54L	98	78.147	ENSPMGG00000016335	rad54l	97	78.147	Periophthalmus_magnuspinnatus
ENSPSIG00000003258	RAD54L	99	85.230	ENSPEMG00000011422	Rad54l	99	85.230	Peromyscus_maniculatus_bairdii
ENSPSIG00000003258	RAD54L	99	72.260	ENSPMAG00000007719	rad54l	98	72.260	Petromyzon_marinus
ENSPSIG00000003258	RAD54L	99	86.395	ENSPCIG00000029032	RAD54L	99	86.395	Phascolarctos_cinereus
ENSPSIG00000003258	RAD54L	86	83.123	ENSPFOG00000013732	rad54l	99	83.123	Poecilia_formosa
ENSPSIG00000003258	RAD54L	83	81.818	ENSPLAG00000023416	rad54l	99	80.519	Poecilia_latipinna
ENSPSIG00000003258	RAD54L	91	80.568	ENSPMEG00000008299	rad54l	99	80.568	Poecilia_mexicana
ENSPSIG00000003258	RAD54L	99	79.292	ENSPREG00000019955	rad54l	99	79.292	Poecilia_reticulata
ENSPSIG00000003258	RAD54L	99	73.613	ENSPPYG00000001398	RAD54L	99	73.613	Pongo_abelii
ENSPSIG00000003258	RAD54L	79	83.981	ENSPCAG00000005323	RAD54L	79	83.981	Procavia_capensis
ENSPSIG00000003258	RAD54L	99	86.721	ENSPCOG00000015423	RAD54L	99	86.721	Propithecus_coquereli
ENSPSIG00000003258	RAD54L	93	80.347	ENSPNYG00000002942	rad54l	96	80.347	Pundamilia_nyererei
ENSPSIG00000003258	RAD54L	99	82.970	ENSPNAG00000012483	rad54l	99	82.970	Pygocentrus_nattereri
ENSPSIG00000003258	RAD54L	99	85.230	ENSRNOG00000013148	Rad54l	99	85.230	Rattus_norvegicus
ENSPSIG00000003258	RAD54L	99	86.043	ENSRBIG00000043495	RAD54L	99	86.043	Rhinopithecus_bieti
ENSPSIG00000003258	RAD54L	99	86.179	ENSRROG00000020844	RAD54L	99	86.179	Rhinopithecus_roxellana
ENSPSIG00000003258	RAD54L	81	49.145	YGL163C	RAD54	70	48.976	Saccharomyces_cerevisiae
ENSPSIG00000003258	RAD54L	99	86.043	ENSSBOG00000024672	RAD54L	99	86.043	Saimiri_boliviensis_boliviensis
ENSPSIG00000003258	RAD54L	99	86.585	ENSSHAG00000000110	RAD54L	99	86.585	Sarcophilus_harrisii
ENSPSIG00000003258	RAD54L	99	81.335	ENSSDUG00000019147	rad54l	99	81.335	Seriola_dumerili
ENSPSIG00000003258	RAD54L	99	81.471	ENSSLDG00000012330	rad54l	99	81.471	Seriola_lalandi_dorsalis
ENSPSIG00000003258	RAD54L	84	84.390	ENSSARG00000006689	RAD54L	99	84.390	Sorex_araneus
ENSPSIG00000003258	RAD54L	99	79.837	ENSSPAG00000011016	rad54l	99	79.837	Stegastes_partitus
ENSPSIG00000003258	RAD54L	99	86.450	ENSSSCG00000003905	RAD54L	99	86.450	Sus_scrofa
ENSPSIG00000003258	RAD54L	98	91.099	ENSTGUG00000008233	RAD54L	99	90.489	Taeniopygia_guttata
ENSPSIG00000003258	RAD54L	92	82.301	ENSTRUG00000008410	rad54l	96	82.301	Takifugu_rubripes
ENSPSIG00000003258	RAD54L	97	78.371	ENSTNIG00000004716	rad54l	94	80.347	Tetraodon_nigroviridis
ENSPSIG00000003258	RAD54L	99	79.810	ENSTTRG00000006315	RAD54L	99	79.810	Tursiops_truncatus
ENSPSIG00000003258	RAD54L	99	85.095	ENSUAMG00000011824	RAD54L	99	85.095	Ursus_americanus
ENSPSIG00000003258	RAD54L	99	84.282	ENSUMAG00000023603	RAD54L	99	84.282	Ursus_maritimus
ENSPSIG00000003258	RAD54L	99	85.637	ENSVVUG00000007201	RAD54L	99	85.637	Vulpes_vulpes
ENSPSIG00000003258	RAD54L	97	81.285	ENSXETG00000004369	rad54l	99	81.285	Xenopus_tropicalis
ENSPSIG00000003258	RAD54L	55	75.248	ENSXCOG00000016028	rad54l	80	79.564	Xiphophorus_couchianus