EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003388 (Gene tree)
Gene ID: 102463296
Gene Symbol: RAB7B
Alias: -
Full Name: RAB7B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 15567 bases
Position: chrJH224633.1:237594-253160
Accession: 102463296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003557	MMR_HSR1	PF01926.23	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003576	RAB7B-201	1796	XM_006137218	ENSPSIP00000003557	200 (aa)	XP_006137280	K7F697

Gene Model

Click here to download ENSPSIG00000003388's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss04137	Mitophagy - animal	KEGG
pss04140	Autophagy - animal	KEGG
pss04145	Phagosome	KEGG
pss05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003388	RAB7B	75	35.762	ENSPSIG00000009592	MRAS	76	36.420
ENSPSIG00000003388	RAB7B	86	30.636	ENSPSIG00000003221	RERG	85	30.636
ENSPSIG00000003388	RAB7B	80	36.646	ENSPSIG00000003078	RAB30	78	36.646
ENSPSIG00000003388	RAB7B	96	33.679	ENSPSIG00000008757	-	95	33.679
ENSPSIG00000003388	RAB7B	77	34.839	ENSPSIG00000015579	RAB23	73	33.333
ENSPSIG00000003388	RAB7B	81	34.545	ENSPSIG00000012698	-	94	34.545
ENSPSIG00000003388	RAB7B	96	30.732	ENSPSIG00000013143	-	94	30.732
ENSPSIG00000003388	RAB7B	75	32.667	ENSPSIG00000015077	-	85	33.129
ENSPSIG00000003388	RAB7B	86	33.333	ENSPSIG00000009545	RAB36	64	33.333
ENSPSIG00000003388	RAB7B	98	50.754	ENSPSIG00000011514	RAB7A	96	50.754
ENSPSIG00000003388	RAB7B	99	42.000	ENSPSIG00000001871	RAB9B	99	42.000
ENSPSIG00000003388	RAB7B	96	36.041	ENSPSIG00000008028	RAB1A	95	36.041
ENSPSIG00000003388	RAB7B	96	32.338	ENSPSIG00000013051	RAB25	93	32.338
ENSPSIG00000003388	RAB7B	84	34.320	ENSPSIG00000001290	-	80	34.320
ENSPSIG00000003388	RAB7B	96	35.122	ENSPSIG00000003919	RAB14	94	35.122
ENSPSIG00000003388	RAB7B	92	38.172	ENSPSIG00000011994	RAB2A	86	38.172
ENSPSIG00000003388	RAB7B	84	34.483	ENSPSIG00000006831	RAB42	75	34.483
ENSPSIG00000003388	RAB7B	83	32.934	ENSPSIG00000009912	RAB22A	85	32.934
ENSPSIG00000003388	RAB7B	81	36.196	ENSPSIG00000009419	RAB39B	76	36.196
ENSPSIG00000003388	RAB7B	97	35.025	ENSPSIG00000009095	RAB31	97	35.025
ENSPSIG00000003388	RAB7B	96	41.753	ENSPSIG00000000469	RAB9A	97	41.753
ENSPSIG00000003388	RAB7B	98	34.634	ENSPSIG00000006606	-	99	34.634
ENSPSIG00000003388	RAB7B	86	34.104	ENSPSIG00000015164	RRAS2	96	34.104
ENSPSIG00000003388	RAB7B	80	31.098	ENSPSIG00000010242	-	63	31.098
ENSPSIG00000003388	RAB7B	77	32.468	ENSPSIG00000002522	-	97	32.468
ENSPSIG00000003388	RAB7B	63	31.111	ENSPSIG00000014774	ARFRP1	63	31.111
ENSPSIG00000003388	RAB7B	81	30.675	ENSPSIG00000010115	RHEB	87	30.675
ENSPSIG00000003388	RAB7B	96	31.122	ENSPSIG00000007157	RAB5A	90	31.122
ENSPSIG00000003388	RAB7B	75	33.333	ENSPSIG00000014690	HRAS	84	33.742

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003388	RAB7B	100	71.500	ENSGAGG00000020394	RAB7B	100	71.500	Gopherus_agassizii
ENSPSIG00000003388	RAB7B	100	77.000	ENSMODG00000001915	RAB7B	100	77.000	Monodelphis_domestica
ENSPSIG00000003388	RAB7B	100	64.677	ENSXETG00000005944	rab7b	100	64.677	Xenopus_tropicalis