EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003404 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 7939 bases
Position: chrJH207556.1:202112-210050
Accession: 102445724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003578	RRM_1	PF00076.22	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003597	PABPN1L-201	573	XM_006118872	ENSPSIP00000003578	190 (aa)	-	K7F6B8

Gene Model

Click here to download ENSPSIG00000003404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003404	PABPN1L	62	65.812	ENSPSIG00000011959	-	91	64.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003404	PABPN1L	100	58.163	ENSG00000205022	PABPN1L	69	56.633	Homo_sapiens
ENSPSIG00000003404	PABPN1L	82	59.394	ENSAPOG00000000685	PABPN1L	52	61.818	Acanthochromis_polyacanthus
ENSPSIG00000003404	PABPN1L	83	59.748	ENSACIG00000021400	PABPN1L	82	66.000	Amphilophus_citrinellus
ENSPSIG00000003404	PABPN1L	76	59.732	ENSAOCG00000019844	PABPN1L	61	62.733	Amphiprion_ocellaris
ENSPSIG00000003404	PABPN1L	76	59.732	ENSAPEG00000019534	PABPN1L	61	62.733	Amphiprion_percula
ENSPSIG00000003404	PABPN1L	81	61.350	ENSATEG00000011646	PABPN1L	64	65.031	Anabas_testudineus
ENSPSIG00000003404	PABPN1L	65	78.226	ENSAPLG00000009174	PABPN1L	100	78.226	Anas_platyrhynchos
ENSPSIG00000003404	PABPN1L	100	74.211	ENSACAG00000013250	PABPN1L	98	72.105	Anolis_carolinensis
ENSPSIG00000003404	PABPN1L	100	57.576	ENSANAG00000038178	PABPN1L	70	56.061	Aotus_nancymaae
ENSPSIG00000003404	PABPN1L	82	62.346	ENSACLG00000025147	PABPN1L	61	64.596	Astatotilapia_calliptera
ENSPSIG00000003404	PABPN1L	76	63.758	ENSAMXG00000010873	PABPN1L	63	63.030	Astyanax_mexicanus
ENSPSIG00000003404	PABPN1L	100	51.500	ENSBTAG00000023752	-	69	51.500	Bos_taurus
ENSPSIG00000003404	PABPN1L	74	66.438	ENSBTAG00000006727	-	85	67.123	Bos_taurus
ENSPSIG00000003404	PABPN1L	100	58.291	ENSCJAG00000045284	PABPN1L	69	54.774	Callithrix_jacchus
ENSPSIG00000003404	PABPN1L	100	50.000	ENSCHIG00000013987	PABPN1L	74	50.476	Capra_hircus
ENSPSIG00000003404	PABPN1L	92	53.804	ENSCAPG00000007240	PABPN1L	60	56.707	Cavia_aperea
ENSPSIG00000003404	PABPN1L	91	53.591	ENSCPOG00000025951	PABPN1L	58	56.707	Cavia_porcellus
ENSPSIG00000003404	PABPN1L	100	57.360	ENSCCAG00000027631	PABPN1L	70	55.330	Cebus_capucinus
ENSPSIG00000003404	PABPN1L	100	57.071	ENSCATG00000031060	PABPN1L	70	55.051	Cercocebus_atys
ENSPSIG00000003404	PABPN1L	100	53.234	ENSCLAG00000000704	PABPN1L	58	57.669	Chinchilla_lanigera
ENSPSIG00000003404	PABPN1L	100	55.660	ENSCSAG00000002881	PABPN1L	72	53.774	Chlorocebus_sabaeus
ENSPSIG00000003404	PABPN1L	100	84.896	ENSCPBG00000023441	PABPN1L	60	84.896	Chrysemys_picta_bellii
ENSPSIG00000003404	PABPN1L	82	64.744	ENSCANG00000039336	PABPN1L	55	62.179	Colobus_angolensis_palliatus
ENSPSIG00000003404	PABPN1L	100	55.721	ENSCGRG00001013211	Pabpn1l	70	54.040	Cricetulus_griseus_chok1gshd
ENSPSIG00000003404	PABPN1L	100	55.721	ENSCGRG00000015868	Pabpn1l	70	54.040	Cricetulus_griseus_crigri
ENSPSIG00000003404	PABPN1L	76	63.889	ENSCSEG00000001142	pabpn1l	60	64.596	Cynoglossus_semilaevis
ENSPSIG00000003404	PABPN1L	52	75.510	ENSCVAG00000015547	PABPN1L	61	63.354	Cyprinodon_variegatus
ENSPSIG00000003404	PABPN1L	100	51.741	ENSDNOG00000034677	PABPN1L	67	50.746	Dasypus_novemcinctus
ENSPSIG00000003404	PABPN1L	100	55.122	ENSEASG00005000777	PABPN1L	71	55.122	Equus_asinus_asinus
ENSPSIG00000003404	PABPN1L	100	55.122	ENSECAG00000000378	PABPN1L	71	55.122	Equus_caballus
ENSPSIG00000003404	PABPN1L	100	56.316	ENSEEUG00000004747	PABPN1L	68	54.211	Erinaceus_europaeus
ENSPSIG00000003404	PABPN1L	76	67.123	ENSELUG00000018385	PABPN1L	63	65.060	Esox_lucius
ENSPSIG00000003404	PABPN1L	100	56.923	ENSFCAG00000010465	PABPN1L	70	56.410	Felis_catus
ENSPSIG00000003404	PABPN1L	100	73.684	ENSFALG00000003319	PABPN1L	77	73.158	Ficedula_albicollis
ENSPSIG00000003404	PABPN1L	100	54.229	ENSFDAG00000021067	PABPN1L	59	56.364	Fukomys_damarensis
ENSPSIG00000003404	PABPN1L	57	71.296	ENSFHEG00000018295	PABPN1L	61	63.975	Fundulus_heteroclitus
ENSPSIG00000003404	PABPN1L	58	68.468	ENSGMOG00000001475	PABPN1L	61	62.195	Gadus_morhua
ENSPSIG00000003404	PABPN1L	94	74.302	ENSGALG00000006242	PABPN1L	100	74.302	Gallus_gallus
ENSPSIG00000003404	PABPN1L	52	75.510	ENSGAFG00000012565	PABPN1L	61	63.354	Gambusia_affinis
ENSPSIG00000003404	PABPN1L	76	59.873	ENSGACG00000015428	PABPN1L	62	61.905	Gasterosteus_aculeatus
ENSPSIG00000003404	PABPN1L	94	85.393	ENSGAGG00000010613	PABPN1L	57	85.294	Gopherus_agassizii
ENSPSIG00000003404	PABPN1L	100	57.653	ENSGGOG00000012670	PABPN1L	70	56.633	Gorilla_gorilla
ENSPSIG00000003404	PABPN1L	82	61.963	ENSHBUG00000002388	PABPN1L	61	65.644	Haplochromis_burtoni
ENSPSIG00000003404	PABPN1L	95	56.614	ENSHGLG00000014207	PABPN1L	60	61.146	Heterocephalus_glaber_female
ENSPSIG00000003404	PABPN1L	95	56.614	ENSHGLG00100005230	PABPN1L	60	61.146	Heterocephalus_glaber_male
ENSPSIG00000003404	PABPN1L	68	57.333	ENSHCOG00000004151	PABPN1L	61	63.690	Hippocampus_comes
ENSPSIG00000003404	PABPN1L	76	61.379	ENSIPUG00000023583	PABPN1L	83	61.212	Ictalurus_punctatus
ENSPSIG00000003404	PABPN1L	100	56.061	ENSSTOG00000020814	PABPN1L	69	56.345	Ictidomys_tridecemlineatus
ENSPSIG00000003404	PABPN1L	100	53.140	ENSJJAG00000006433	Pabpn1l	70	52.709	Jaculus_jaculus
ENSPSIG00000003404	PABPN1L	52	72.727	ENSKMAG00000001112	PABPN1L	65	64.667	Kryptolebias_marmoratus
ENSPSIG00000003404	PABPN1L	76	59.732	ENSLBEG00000011647	PABPN1L	57	64.151	Labrus_bergylta
ENSPSIG00000003404	PABPN1L	100	60.104	ENSLAFG00000025902	-	77	58.031	Loxodonta_africana
ENSPSIG00000003404	PABPN1L	100	57.576	ENSMFAG00000002924	PABPN1L	70	55.556	Macaca_fascicularis
ENSPSIG00000003404	PABPN1L	100	58.376	ENSMMUG00000012438	PABPN1L	70	56.345	Macaca_mulatta
ENSPSIG00000003404	PABPN1L	100	57.576	ENSMNEG00000044808	PABPN1L	70	55.556	Macaca_nemestrina
ENSPSIG00000003404	PABPN1L	100	56.566	ENSMLEG00000032667	PABPN1L	70	54.545	Mandrillus_leucophaeus
ENSPSIG00000003404	PABPN1L	82	62.346	ENSMZEG00005002186	PABPN1L	61	64.596	Maylandia_zebra
ENSPSIG00000003404	PABPN1L	100	54.229	ENSMAUG00000014032	Pabpn1l	72	53.535	Mesocricetus_auratus
ENSPSIG00000003404	PABPN1L	100	55.838	ENSMICG00000028179	PABPN1L	70	54.315	Microcebus_murinus
ENSPSIG00000003404	PABPN1L	100	56.219	ENSMOCG00000007955	Pabpn1l	71	55.051	Microtus_ochrogaster
ENSPSIG00000003404	PABPN1L	56	70.755	ENSMMOG00000017714	PABPN1L	52	69.421	Mola_mola
ENSPSIG00000003404	PABPN1L	100	60.406	ENSMODG00000003873	-	73	60.914	Monodelphis_domestica
ENSPSIG00000003404	PABPN1L	79	61.688	ENSMALG00000016926	PABPN1L	61	64.596	Monopterus_albus
ENSPSIG00000003404	PABPN1L	100	53.171	MGP_CAROLIEiJ_G0031670	Pabpn1l	70	51.905	Mus_caroli
ENSPSIG00000003404	PABPN1L	100	53.171	ENSMUSG00000069867	Pabpn1l	70	51.429	Mus_musculus
ENSPSIG00000003404	PABPN1L	100	54.634	MGP_PahariEiJ_G0023268	Pabpn1l	70	53.333	Mus_pahari
ENSPSIG00000003404	PABPN1L	100	53.333	MGP_SPRETEiJ_G0032788	Pabpn1l	70	50.952	Mus_spretus
ENSPSIG00000003404	PABPN1L	100	53.333	ENSNGAG00000023992	Pabpn1l	71	51.691	Nannospalax_galili
ENSPSIG00000003404	PABPN1L	82	61.728	ENSNBRG00000017078	PABPN1L	67	65.432	Neolamprologus_brichardi
ENSPSIG00000003404	PABPN1L	100	56.784	ENSOPRG00000005597	PABPN1L	71	54.271	Ochotona_princeps
ENSPSIG00000003404	PABPN1L	74	65.000	ENSODEG00000004649	PABPN1L	66	52.792	Octodon_degus
ENSPSIG00000003404	PABPN1L	100	67.539	ENSOANG00000013901	PABPN1L	72	67.539	Ornithorhynchus_anatinus
ENSPSIG00000003404	PABPN1L	82	63.522	ENSORLG00000026560	PABPN1L	59	63.522	Oryzias_latipes
ENSPSIG00000003404	PABPN1L	82	63.522	ENSORLG00020015068	PABPN1L	59	63.522	Oryzias_latipes_hni
ENSPSIG00000003404	PABPN1L	82	63.522	ENSORLG00015000397	PABPN1L	59	63.522	Oryzias_latipes_hsok
ENSPSIG00000003404	PABPN1L	100	58.081	ENSOGAG00000000433	PABPN1L	70	56.566	Otolemur_garnettii
ENSPSIG00000003404	PABPN1L	100	53.589	ENSOARG00000013682	PABPN1L	67	53.110	Ovis_aries
ENSPSIG00000003404	PABPN1L	100	56.566	ENSPPAG00000028866	PABPN1L	69	55.051	Pan_paniscus
ENSPSIG00000003404	PABPN1L	100	54.327	ENSPPRG00000015106	PABPN1L	70	53.846	Panthera_pardus
ENSPSIG00000003404	PABPN1L	89	55.747	ENSPTIG00000015606	PABPN1L	65	55.747	Panthera_tigris_altaica
ENSPSIG00000003404	PABPN1L	100	56.566	ENSPTRG00000031120	PABPN1L	69	55.051	Pan_troglodytes
ENSPSIG00000003404	PABPN1L	100	56.784	ENSPANG00000026039	PABPN1L	70	54.774	Papio_anubis
ENSPSIG00000003404	PABPN1L	55	73.333	ENSPMGG00000013927	PABPN1L	58	75.510	Periophthalmus_magnuspinnatus
ENSPSIG00000003404	PABPN1L	100	56.061	ENSPEMG00000016624	Pabpn1l	72	54.545	Peromyscus_maniculatus_bairdii
ENSPSIG00000003404	PABPN1L	75	67.832	ENSPCIG00000007038	-	99	67.832	Phascolarctos_cinereus
ENSPSIG00000003404	PABPN1L	52	75.510	ENSPFOG00000007001	PABPN1L	78	54.082	Poecilia_formosa
ENSPSIG00000003404	PABPN1L	52	75.510	ENSPLAG00000018431	PABPN1L	61	63.354	Poecilia_latipinna
ENSPSIG00000003404	PABPN1L	52	75.510	ENSPMEG00000009108	PABPN1L	61	63.354	Poecilia_mexicana
ENSPSIG00000003404	PABPN1L	52	75.510	ENSPREG00000022533	PABPN1L	64	63.087	Poecilia_reticulata
ENSPSIG00000003404	PABPN1L	100	57.071	ENSPPYG00000007655	PABPN1L	69	55.556	Pongo_abelii
ENSPSIG00000003404	PABPN1L	75	70.629	ENSPCOG00000024077	PABPN1L	52	68.531	Propithecus_coquereli
ENSPSIG00000003404	PABPN1L	82	62.346	ENSPNYG00000004803	PABPN1L	61	64.596	Pundamilia_nyererei
ENSPSIG00000003404	PABPN1L	74	67.376	ENSRNOG00000029558	Pabpn1l	71	51.759	Rattus_norvegicus
ENSPSIG00000003404	PABPN1L	100	56.784	ENSRBIG00000030740	PABPN1L	70	55.276	Rhinopithecus_bieti
ENSPSIG00000003404	PABPN1L	100	56.784	ENSRROG00000032240	-	70	55.276	Rhinopithecus_roxellana
ENSPSIG00000003404	PABPN1L	99	57.360	ENSRROG00000035483	-	70	55.330	Rhinopithecus_roxellana
ENSPSIG00000003404	PABPN1L	100	56.853	ENSSBOG00000018410	PABPN1L	70	54.822	Saimiri_boliviensis_boliviensis
ENSPSIG00000003404	PABPN1L	100	56.731	ENSSHAG00000010001	-	61	58.333	Sarcophilus_harrisii
ENSPSIG00000003404	PABPN1L	76	60.417	ENSSMAG00000021348	PABPN1L	63	61.047	Scophthalmus_maximus
ENSPSIG00000003404	PABPN1L	76	57.419	ENSSDUG00000006986	PABPN1L	61	62.733	Seriola_dumerili
ENSPSIG00000003404	PABPN1L	76	57.419	ENSSLDG00000021845	PABPN1L	61	62.733	Seriola_lalandi_dorsalis
ENSPSIG00000003404	PABPN1L	99	78.307	ENSSPUG00000007031	PABPN1L	84	78.421	Sphenodon_punctatus
ENSPSIG00000003404	PABPN1L	82	58.929	ENSSPAG00000017978	PABPN1L	61	63.354	Stegastes_partitus
ENSPSIG00000003404	PABPN1L	75	64.865	ENSSSCG00000036367	PABPN1L	59	61.146	Sus_scrofa
ENSPSIG00000003404	PABPN1L	76	59.211	ENSTRUG00000024725	PABPN1L	68	62.424	Takifugu_rubripes
ENSPSIG00000003404	PABPN1L	52	73.469	ENSTNIG00000009416	PABPN1L	59	71.681	Tetraodon_nigroviridis
ENSPSIG00000003404	PABPN1L	74	67.143	ENSTTRG00000004691	PABPN1L	70	52.133	Tursiops_truncatus
ENSPSIG00000003404	PABPN1L	76	63.871	ENSXETG00000011258	pabpn1l	79	62.428	Xenopus_tropicalis
ENSPSIG00000003404	PABPN1L	52	75.510	ENSXCOG00000003254	PABPN1L	64	63.758	Xiphophorus_couchianus
ENSPSIG00000003404	PABPN1L	56	71.698	ENSXMAG00000029090	PABPN1L	64	63.576	Xiphophorus_maculatus