EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000003476 (Gene tree)
Gene ID: -
Gene Symbol: TRMT12
Alias: -
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 3279 bases
Position: chrJH224639.1:1608678-1611956
Accession: 102456684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003652	MTS	PF05175.14	7.4e-05	1	1
ENSPSIP00000003652	Met_10	PF02475.16	8.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003672	TRMT12-201	1095	XM_006137463	ENSPSIP00000003652	271 (aa)	XP_006137525	K7F6J2

Gene Model

Click here to download ENSPSIG00000003476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003476	TRMT12	99	67.910	ENSG00000183665	TRMT12	58	67.910	Homo_sapiens
ENSPSIG00000003476	TRMT12	99	59.851	ENSAPOG00000011979	trmt12	58	59.851	Acanthochromis_polyacanthus
ENSPSIG00000003476	TRMT12	99	70.522	ENSAMEG00000019612	TRMT12	58	70.522	Ailuropoda_melanoleuca
ENSPSIG00000003476	TRMT12	99	56.877	ENSACIG00000012982	trmt12	61	56.877	Amphilophus_citrinellus
ENSPSIG00000003476	TRMT12	99	60.223	ENSAOCG00000020570	trmt12	61	60.223	Amphiprion_ocellaris
ENSPSIG00000003476	TRMT12	99	60.967	ENSAPEG00000006335	trmt12	61	60.967	Amphiprion_percula
ENSPSIG00000003476	TRMT12	99	57.778	ENSATEG00000018316	trmt12	59	57.778	Anabas_testudineus
ENSPSIG00000003476	TRMT12	99	59.480	ENSACLG00000001008	trmt12	58	59.480	Astatotilapia_calliptera
ENSPSIG00000003476	TRMT12	99	58.889	ENSAMXG00000040366	trmt12	60	58.889	Astyanax_mexicanus
ENSPSIG00000003476	TRMT12	99	67.910	ENSBTAG00000020398	TRMT12	56	67.910	Bos_taurus
ENSPSIG00000003476	TRMT12	99	67.537	ENSCJAG00000022174	TRMT12	58	67.537	Callithrix_jacchus
ENSPSIG00000003476	TRMT12	99	69.403	ENSCAFG00000001040	TRMT12	59	69.403	Canis_familiaris
ENSPSIG00000003476	TRMT12	99	69.403	ENSCAFG00020006500	TRMT12	59	69.403	Canis_lupus_dingo
ENSPSIG00000003476	TRMT12	99	68.657	ENSCHIG00000016574	TRMT12	59	68.657	Capra_hircus
ENSPSIG00000003476	TRMT12	99	67.537	ENSCPOG00000026520	TRMT12	58	67.537	Cavia_porcellus
ENSPSIG00000003476	TRMT12	99	68.284	ENSCSAG00000018615	TRMT12	58	68.284	Chlorocebus_sabaeus
ENSPSIG00000003476	TRMT12	100	89.781	ENSCPBG00000014290	TRMT12	60	89.781	Chrysemys_picta_bellii
ENSPSIG00000003476	TRMT12	97	44.776	ENSCING00000019633	-	78	44.776	Ciona_intestinalis
ENSPSIG00000003476	TRMT12	98	45.660	ENSCSAVG00000000415	-	71	45.660	Ciona_savignyi
ENSPSIG00000003476	TRMT12	99	65.799	ENSCGRG00001014834	Trmt12	57	65.799	Cricetulus_griseus_chok1gshd
ENSPSIG00000003476	TRMT12	99	58.736	ENSCSEG00000002675	trmt12	56	58.736	Cynoglossus_semilaevis
ENSPSIG00000003476	TRMT12	99	58.364	ENSCVAG00000005590	trmt12	58	58.364	Cyprinodon_variegatus
ENSPSIG00000003476	TRMT12	99	56.506	ENSDARG00000060338	trmt12	59	56.506	Danio_rerio
ENSPSIG00000003476	TRMT12	99	67.279	ENSETEG00000009373	TRMT12	58	67.279	Echinops_telfairi
ENSPSIG00000003476	TRMT12	99	67.910	ENSEASG00005022441	TRMT12	59	67.910	Equus_asinus_asinus
ENSPSIG00000003476	TRMT12	99	65.672	ENSEEUG00000004844	TRMT12	58	65.672	Erinaceus_europaeus
ENSPSIG00000003476	TRMT12	99	59.259	ENSELUG00000004240	trmt12	64	59.259	Esox_lucius
ENSPSIG00000003476	TRMT12	99	68.773	ENSFALG00000003825	TRMT12	90	67.658	Ficedula_albicollis
ENSPSIG00000003476	TRMT12	99	67.537	ENSFDAG00000016647	TRMT12	59	67.537	Fukomys_damarensis
ENSPSIG00000003476	TRMT12	99	44.280	ENSFHEG00000017338	trmt12	59	44.280	Fundulus_heteroclitus
ENSPSIG00000003476	TRMT12	99	68.148	ENSGALG00000006773	TRMT12	56	68.148	Gallus_gallus
ENSPSIG00000003476	TRMT12	99	57.778	ENSGAFG00000020056	trmt12	59	57.778	Gambusia_affinis
ENSPSIG00000003476	TRMT12	99	55.762	ENSGACG00000017351	trmt12	60	55.762	Gasterosteus_aculeatus
ENSPSIG00000003476	TRMT12	100	90.406	ENSGAGG00000006032	TRMT12	61	90.406	Gopherus_agassizii
ENSPSIG00000003476	TRMT12	99	59.480	ENSHBUG00000016412	trmt12	58	59.480	Haplochromis_burtoni
ENSPSIG00000003476	TRMT12	99	66.045	ENSHGLG00000020498	TRMT12	59	66.045	Heterocephalus_glaber_female
ENSPSIG00000003476	TRMT12	99	66.045	ENSHGLG00100020132	TRMT12	59	66.045	Heterocephalus_glaber_male
ENSPSIG00000003476	TRMT12	99	58.736	ENSHCOG00000005050	trmt12	68	58.736	Hippocampus_comes
ENSPSIG00000003476	TRMT12	99	56.506	ENSIPUG00000018011	trmt12	55	56.506	Ictalurus_punctatus
ENSPSIG00000003476	TRMT12	99	67.164	ENSSTOG00000030617	TRMT12	59	67.164	Ictidomys_tridecemlineatus
ENSPSIG00000003476	TRMT12	99	57.778	ENSKMAG00000000891	trmt12	58	57.778	Kryptolebias_marmoratus
ENSPSIG00000003476	TRMT12	99	57.621	ENSLBEG00000028712	trmt12	60	57.621	Labrus_bergylta
ENSPSIG00000003476	TRMT12	92	58.468	ENSLBEG00000017456	-	88	58.468	Labrus_bergylta
ENSPSIG00000003476	TRMT12	99	64.207	ENSLACG00000015869	TRMT12	59	64.207	Latimeria_chalumnae
ENSPSIG00000003476	TRMT12	99	59.630	ENSLOCG00000015290	trmt12	59	59.630	Lepisosteus_oculatus
ENSPSIG00000003476	TRMT12	99	67.910	ENSLAFG00000012519	TRMT12	59	67.910	Loxodonta_africana
ENSPSIG00000003476	TRMT12	99	67.910	ENSMMUG00000015490	TRMT12	58	67.910	Macaca_mulatta
ENSPSIG00000003476	TRMT12	99	61.111	ENSMAMG00000020311	trmt12	59	61.111	Mastacembelus_armatus
ENSPSIG00000003476	TRMT12	99	59.851	ENSMZEG00005007349	trmt12	58	59.851	Maylandia_zebra
ENSPSIG00000003476	TRMT12	99	69.145	ENSMGAG00000004174	TRMT12	58	69.145	Meleagris_gallopavo
ENSPSIG00000003476	TRMT12	99	57.778	ENSMMOG00000000412	trmt12	60	57.778	Mola_mola
ENSPSIG00000003476	TRMT12	99	66.296	ENSMODG00000011798	-	52	66.296	Monodelphis_domestica
ENSPSIG00000003476	TRMT12	99	66.667	ENSMODG00000021403	-	57	66.667	Monodelphis_domestica
ENSPSIG00000003476	TRMT12	99	60.370	ENSMALG00000008668	trmt12	59	60.370	Monopterus_albus
ENSPSIG00000003476	TRMT12	99	65.299	MGP_CAROLIEiJ_G0019820	Trmt12	58	65.299	Mus_caroli
ENSPSIG00000003476	TRMT12	99	65.556	ENSMUSG00000037085	Trmt12	58	65.556	Mus_musculus
ENSPSIG00000003476	TRMT12	99	67.537	MGP_PahariEiJ_G0019829	Trmt12	58	67.537	Mus_pahari
ENSPSIG00000003476	TRMT12	99	65.185	MGP_SPRETEiJ_G0020717	Trmt12	58	65.185	Mus_spretus
ENSPSIG00000003476	TRMT12	99	68.657	ENSMPUG00000019150	TRMT12	58	68.657	Mustela_putorius_furo
ENSPSIG00000003476	TRMT12	99	69.030	ENSMLUG00000003753	TRMT12	59	69.030	Myotis_lucifugus
ENSPSIG00000003476	TRMT12	99	66.045	ENSNGAG00000014548	Trmt12	59	66.045	Nannospalax_galili
ENSPSIG00000003476	TRMT12	99	59.480	ENSNBRG00000021510	trmt12	59	59.480	Neolamprologus_brichardi
ENSPSIG00000003476	TRMT12	99	62.593	ENSOPRG00000008067	TRMT12	59	62.593	Ochotona_princeps
ENSPSIG00000003476	TRMT12	99	67.537	ENSODEG00000018933	TRMT12	59	67.537	Octodon_degus
ENSPSIG00000003476	TRMT12	99	59.480	ENSONIG00000002614	trmt12	58	59.480	Oreochromis_niloticus
ENSPSIG00000003476	TRMT12	99	65.556	ENSOANG00000009987	TRMT12	58	65.556	Ornithorhynchus_anatinus
ENSPSIG00000003476	TRMT12	99	61.538	ENSOCUG00000026379	TRMT12	58	61.538	Oryctolagus_cuniculus
ENSPSIG00000003476	TRMT12	99	60.595	ENSORLG00000001280	trmt12	59	60.595	Oryzias_latipes
ENSPSIG00000003476	TRMT12	99	60.595	ENSORLG00020000708	trmt12	59	60.595	Oryzias_latipes_hni
ENSPSIG00000003476	TRMT12	99	59.480	ENSORLG00015012344	trmt12	59	59.480	Oryzias_latipes_hsok
ENSPSIG00000003476	TRMT12	99	57.993	ENSOMEG00000015267	trmt12	58	57.993	Oryzias_melastigma
ENSPSIG00000003476	TRMT12	99	68.519	ENSOGAG00000015845	TRMT12	59	68.519	Otolemur_garnettii
ENSPSIG00000003476	TRMT12	99	61.567	ENSPKIG00000004640	trmt12	60	61.567	Paramormyrops_kingsleyae
ENSPSIG00000003476	TRMT12	99	57.143	ENSPMGG00000016356	trmt12	57	57.143	Periophthalmus_magnuspinnatus
ENSPSIG00000003476	TRMT12	99	68.148	ENSPCIG00000002967	TRMT12	53	68.148	Phascolarctos_cinereus
ENSPSIG00000003476	TRMT12	99	58.148	ENSPFOG00000016931	trmt12	57	58.148	Poecilia_formosa
ENSPSIG00000003476	TRMT12	99	58.364	ENSPLAG00000020621	trmt12	59	58.364	Poecilia_latipinna
ENSPSIG00000003476	TRMT12	99	58.889	ENSPMEG00000000818	trmt12	59	58.889	Poecilia_mexicana
ENSPSIG00000003476	TRMT12	99	57.621	ENSPREG00000011621	trmt12	59	57.621	Poecilia_reticulata
ENSPSIG00000003476	TRMT12	99	67.910	ENSPPYG00000018866	TRMT12	58	67.910	Pongo_abelii
ENSPSIG00000003476	TRMT12	99	69.145	ENSPCAG00000000556	TRMT12	58	69.145	Procavia_capensis
ENSPSIG00000003476	TRMT12	99	69.403	ENSPVAG00000009149	TRMT12	58	69.403	Pteropus_vampyrus
ENSPSIG00000003476	TRMT12	99	59.108	ENSPNYG00000010696	trmt12	61	59.108	Pundamilia_nyererei
ENSPSIG00000003476	TRMT12	99	56.667	ENSPNAG00000019028	trmt12	59	56.667	Pygocentrus_nattereri
ENSPSIG00000003476	TRMT12	99	67.164	ENSRNOG00000008978	Trmt12	59	67.164	Rattus_norvegicus
ENSPSIG00000003476	TRMT12	99	67.037	ENSSHAG00000003345	TRMT12	57	67.037	Sarcophilus_harrisii
ENSPSIG00000003476	TRMT12	99	59.480	ENSSFOG00015006090	trmt12	59	59.480	Scleropages_formosus
ENSPSIG00000003476	TRMT12	99	58.519	ENSSMAG00000013247	trmt12	59	58.519	Scophthalmus_maximus
ENSPSIG00000003476	TRMT12	99	60.223	ENSSDUG00000006168	trmt12	59	60.223	Seriola_dumerili
ENSPSIG00000003476	TRMT12	99	60.223	ENSSLDG00000025007	trmt12	59	60.223	Seriola_lalandi_dorsalis
ENSPSIG00000003476	TRMT12	99	74.088	ENSSPUG00000005321	TRMT12	59	74.088	Sphenodon_punctatus
ENSPSIG00000003476	TRMT12	99	60.595	ENSSPAG00000009435	trmt12	56	60.595	Stegastes_partitus
ENSPSIG00000003476	TRMT12	99	67.037	ENSTGUG00000002280	TRMT12	62	67.037	Taeniopygia_guttata
ENSPSIG00000003476	TRMT12	99	56.877	ENSTRUG00000011548	trmt12	58	56.877	Takifugu_rubripes
ENSPSIG00000003476	TRMT12	99	57.249	ENSTNIG00000016866	trmt12	57	57.249	Tetraodon_nigroviridis
ENSPSIG00000003476	TRMT12	99	69.888	ENSUAMG00000002067	TRMT12	60	69.888	Ursus_americanus
ENSPSIG00000003476	TRMT12	99	68.657	ENSVPAG00000006519	TRMT12	58	68.657	Vicugna_pacos
ENSPSIG00000003476	TRMT12	99	70.149	ENSVVUG00000016790	TRMT12	58	70.149	Vulpes_vulpes
ENSPSIG00000003476	TRMT12	99	57.037	ENSXETG00000009641	trmt12	55	57.037	Xenopus_tropicalis
ENSPSIG00000003476	TRMT12	99	57.778	ENSXCOG00000016505	trmt12	62	57.778	Xiphophorus_couchianus
ENSPSIG00000003476	TRMT12	99	58.148	ENSXMAG00000025318	trmt12	58	58.148	Xiphophorus_maculatus