EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003477 (Gene tree)
Gene ID: 102462531
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 16369 bases
Position: chrJH211041.1:253072-269440
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003654	zf-CCHC	PF00098.23	1.1e-07	1	1
ENSPSIP00000003654	RRM_5	PF13893.6	4.6e-09	1	2
ENSPSIP00000003654	RRM_5	PF13893.6	4.6e-09	2	2
ENSPSIP00000003654	RRM_1	PF00076.22	1e-32	1	2
ENSPSIP00000003654	RRM_1	PF00076.22	1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003674	-	909	-	ENSPSIP00000003654	303 (aa)	-	K7F6J4

Gene Model

Click here to download ENSPSIG00000003477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003477	-	97	99.322	ENSPSIG00000003430	-	81	99.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003477	-	95	79.110	ENSG00000173914	RBM4B	97	95.683	Homo_sapiens
ENSPSIG00000003477	-	95	77.740	ENSG00000173933	RBM4	97	95.652	Homo_sapiens
ENSPSIG00000003477	-	94	48.464	ENSG00000248643	RBM14-RBM4	95	41.071	Homo_sapiens
ENSPSIG00000003477	-	95	80.479	ENSAMEG00000010906	RBM4B	77	81.315	Ailuropoda_melanoleuca
ENSPSIG00000003477	-	95	77.397	ENSAMEG00000010914	RBM4	76	77.855	Ailuropoda_melanoleuca
ENSPSIG00000003477	-	95	79.110	ENSANAG00000023478	RBM4B	97	95.683	Aotus_nancymaae
ENSPSIG00000003477	-	50	94.161	ENSANAG00000033986	-	83	94.161	Aotus_nancymaae
ENSPSIG00000003477	-	95	78.082	ENSBTAG00000031688	RBM4	77	78.547	Bos_taurus
ENSPSIG00000003477	-	95	79.795	ENSBTAG00000000423	RBM4B	62	96.377	Bos_taurus
ENSPSIG00000003477	-	95	78.767	ENSCJAG00000013666	RBM4B	97	95.683	Callithrix_jacchus
ENSPSIG00000003477	-	95	77.397	ENSCAFG00000012388	RBM4	76	77.855	Canis_familiaris
ENSPSIG00000003477	-	95	80.836	ENSCAFG00000012378	RBM4B	77	80.969	Canis_familiaris
ENSPSIG00000003477	-	95	80.836	ENSCAFG00020015519	RBM4B	77	96.377	Canis_lupus_dingo
ENSPSIG00000003477	-	95	77.397	ENSCAFG00020015515	RBM4	76	77.855	Canis_lupus_dingo
ENSPSIG00000003477	-	95	80.137	ENSCHIG00000008907	RBM4B	77	80.969	Capra_hircus
ENSPSIG00000003477	-	95	78.082	ENSCHIG00000020613	RBM4	77	78.547	Capra_hircus
ENSPSIG00000003477	-	54	63.690	ENSTSYG00000009580	RBM4B	62	64.848	Carlito_syrichta
ENSPSIG00000003477	-	95	77.397	ENSCAPG00000016600	RBM4	97	96.377	Cavia_aperea
ENSPSIG00000003477	-	95	79.795	ENSCAPG00000009570	RBM4B	77	80.623	Cavia_aperea
ENSPSIG00000003477	-	95	79.795	ENSCPOG00000013689	RBM4B	77	80.623	Cavia_porcellus
ENSPSIG00000003477	-	95	77.397	ENSCPOG00000013194	RBM4	97	96.377	Cavia_porcellus
ENSPSIG00000003477	-	50	92.754	ENSCCAG00000007508	-	97	92.754	Cebus_capucinus
ENSPSIG00000003477	-	66	68.657	ENSCCAG00000023319	-	100	68.657	Cebus_capucinus
ENSPSIG00000003477	-	95	79.110	ENSCCAG00000016501	RBM4B	97	95.683	Cebus_capucinus
ENSPSIG00000003477	-	95	79.110	ENSCATG00000035353	RBM4B	97	95.683	Cercocebus_atys
ENSPSIG00000003477	-	95	79.795	ENSCLAG00000015287	RBM4B	77	80.623	Chinchilla_lanigera
ENSPSIG00000003477	-	95	77.055	ENSCLAG00000014756	RBM4	97	96.377	Chinchilla_lanigera
ENSPSIG00000003477	-	95	79.110	ENSCSAG00000008361	RBM4B	77	80.969	Chlorocebus_sabaeus
ENSPSIG00000003477	-	95	80.479	ENSCHOG00000002892	RBM4B	77	81.315	Choloepus_hoffmanni
ENSPSIG00000003477	-	97	97.667	ENSCPBG00000023800	-	80	97.667	Chrysemys_picta_bellii
ENSPSIG00000003477	-	95	79.110	ENSCANG00000021868	RBM4B	97	95.683	Colobus_angolensis_palliatus
ENSPSIG00000003477	-	95	77.055	ENSCGRG00001016609	-	97	96.377	Cricetulus_griseus_chok1gshd
ENSPSIG00000003477	-	93	78.819	ENSCGRG00001024693	Rbm4b	77	79.931	Cricetulus_griseus_chok1gshd
ENSPSIG00000003477	-	95	77.055	ENSCGRG00000010183	-	97	96.377	Cricetulus_griseus_crigri
ENSPSIG00000003477	-	93	78.819	ENSCGRG00000012112	Rbm4b	77	79.931	Cricetulus_griseus_crigri
ENSPSIG00000003477	-	95	76.712	ENSDNOG00000032390	RBM4	76	77.163	Dasypus_novemcinctus
ENSPSIG00000003477	-	95	80.479	ENSDNOG00000019500	-	77	81.315	Dasypus_novemcinctus
ENSPSIG00000003477	-	95	79.795	ENSDNOG00000045639	-	77	80.623	Dasypus_novemcinctus
ENSPSIG00000003477	-	93	80.282	ENSDORG00000029108	Rbm4b	78	80.690	Dipodomys_ordii
ENSPSIG00000003477	-	95	75.084	ENSDORG00000004538	-	97	94.928	Dipodomys_ordii
ENSPSIG00000003477	-	95	80.479	ENSEASG00005005068	RBM4B	77	81.315	Equus_asinus_asinus
ENSPSIG00000003477	-	95	77.397	ENSEASG00005005064	RBM4	77	77.855	Equus_asinus_asinus
ENSPSIG00000003477	-	95	77.397	ENSECAG00000022940	RBM4	77	77.855	Equus_caballus
ENSPSIG00000003477	-	95	80.479	ENSECAG00000022987	RBM4B	77	81.315	Equus_caballus
ENSPSIG00000003477	-	95	77.816	ENSEEUG00000000058	RBM4B	76	78.893	Erinaceus_europaeus
ENSPSIG00000003477	-	94	80.690	ENSFCAG00000007394	RBM4B	97	95.683	Felis_catus
ENSPSIG00000003477	-	95	77.397	ENSFCAG00000029651	RBM4	97	95.652	Felis_catus
ENSPSIG00000003477	-	87	93.916	ENSFALG00000002073	-	71	94.553	Ficedula_albicollis
ENSPSIG00000003477	-	95	78.498	ENSFDAG00000005447	RBM4	97	96.377	Fukomys_damarensis
ENSPSIG00000003477	-	95	79.795	ENSFDAG00000015530	RBM4B	77	80.623	Fukomys_damarensis
ENSPSIG00000003477	-	63	89.683	ENSFDAG00000013661	-	96	89.683	Fukomys_damarensis
ENSPSIG00000003477	-	95	94.425	ENSGALG00000037946	-	77	94.346	Gallus_gallus
ENSPSIG00000003477	-	100	93.851	ENSGAGG00000008553	-	83	93.851	Gopherus_agassizii
ENSPSIG00000003477	-	95	79.110	ENSGGOG00000011698	RBM4B	97	95.683	Gorilla_gorilla
ENSPSIG00000003477	-	50	77.372	ENSGGOG00000043023	-	98	76.812	Gorilla_gorilla
ENSPSIG00000003477	-	95	79.795	ENSHGLG00000016412	-	77	80.623	Heterocephalus_glaber_female
ENSPSIG00000003477	-	97	68.896	ENSHGLG00000002853	-	81	70.242	Heterocephalus_glaber_female
ENSPSIG00000003477	-	69	45.594	ENSHGLG00000000117	-	74	58.824	Heterocephalus_glaber_female
ENSPSIG00000003477	-	95	77.740	ENSHGLG00000009991	RBM4	97	96.377	Heterocephalus_glaber_female
ENSPSIG00000003477	-	95	79.795	ENSHGLG00100003978	-	77	80.623	Heterocephalus_glaber_male
ENSPSIG00000003477	-	75	88.496	ENSHGLG00100003854	RBM4	97	96.377	Heterocephalus_glaber_male
ENSPSIG00000003477	-	97	68.896	ENSHGLG00100020033	-	83	70.242	Heterocephalus_glaber_male
ENSPSIG00000003477	-	95	77.055	ENSSTOG00000022811	RBM4	97	95.652	Ictidomys_tridecemlineatus
ENSPSIG00000003477	-	95	79.795	ENSSTOG00000011226	RBM4B	77	80.969	Ictidomys_tridecemlineatus
ENSPSIG00000003477	-	95	75.685	ENSJJAG00000020870	Rbm4b	77	78.201	Jaculus_jaculus
ENSPSIG00000003477	-	95	77.431	ENSLAFG00000028147	-	80	78.472	Loxodonta_africana
ENSPSIG00000003477	-	93	78.472	ENSLAFG00000002285	RBM4B	77	78.893	Loxodonta_africana
ENSPSIG00000003477	-	95	79.110	ENSMFAG00000033927	RBM4B	97	96.377	Macaca_fascicularis
ENSPSIG00000003477	-	95	79.110	ENSMNEG00000043371	RBM4B	97	95.683	Macaca_nemestrina
ENSPSIG00000003477	-	95	79.110	ENSMLEG00000028563	RBM4B	97	96.377	Mandrillus_leucophaeus
ENSPSIG00000003477	-	93	79.861	ENSMAUG00000017027	Rbm4b	78	80.969	Mesocricetus_auratus
ENSPSIG00000003477	-	95	79.452	ENSMICG00000003820	RBM4B	97	95.683	Microcebus_murinus
ENSPSIG00000003477	-	50	91.304	ENSMICG00000003817	-	97	91.304	Microcebus_murinus
ENSPSIG00000003477	-	50	94.203	ENSMICG00000047975	-	95	94.203	Microcebus_murinus
ENSPSIG00000003477	-	93	79.167	ENSMOCG00000001835	Rbm4b	77	80.277	Microtus_ochrogaster
ENSPSIG00000003477	-	95	77.700	ENSMODG00000008056	-	75	77.778	Monodelphis_domestica
ENSPSIG00000003477	-	94	46.875	MGP_CAROLIEiJ_G0022514	-	95	41.071	Mus_caroli
ENSPSIG00000003477	-	93	79.861	MGP_CAROLIEiJ_G0022515	Rbm4b	77	80.969	Mus_caroli
ENSPSIG00000003477	-	95	77.003	MGP_CAROLIEiJ_G0022516	-	97	96.377	Mus_caroli
ENSPSIG00000003477	-	95	76.655	ENSMUSG00000096370	Gm21992	83	76.471	Mus_musculus
ENSPSIG00000003477	-	95	76.655	ENSMUSG00000094936	Rbm4	100	95.349	Mus_musculus
ENSPSIG00000003477	-	93	79.861	ENSMUSG00000033760	Rbm4b	91	95.683	Mus_musculus
ENSPSIG00000003477	-	93	79.861	MGP_PahariEiJ_G0014012	Rbm4b	77	80.969	Mus_pahari
ENSPSIG00000003477	-	95	76.655	MGP_PahariEiJ_G0014013	-	97	96.377	Mus_pahari
ENSPSIG00000003477	-	95	76.655	MGP_PahariEiJ_G0014011	-	77	77.509	Mus_pahari
ENSPSIG00000003477	-	94	52.823	MGP_SPRETEiJ_G0023430	-	74	54.000	Mus_spretus
ENSPSIG00000003477	-	93	63.981	MGP_SPRETEiJ_G0023429	-	71	65.877	Mus_spretus
ENSPSIG00000003477	-	95	52.610	MGP_SPRETEiJ_G0023428	-	95	41.071	Mus_spretus
ENSPSIG00000003477	-	95	80.479	ENSMPUG00000003450	RBM4B	77	81.315	Mustela_putorius_furo
ENSPSIG00000003477	-	95	77.397	ENSMPUG00000003443	RBM4	76	77.855	Mustela_putorius_furo
ENSPSIG00000003477	-	97	79.264	ENSMLUG00000001290	RBM4B	79	81.315	Myotis_lucifugus
ENSPSIG00000003477	-	95	77.816	ENSMLUG00000004076	RBM4	73	79.310	Myotis_lucifugus
ENSPSIG00000003477	-	93	79.861	ENSNGAG00000016292	Rbm4b	77	80.623	Nannospalax_galili
ENSPSIG00000003477	-	95	77.740	ENSNLEG00000035021	RBM4	98	95.652	Nomascus_leucogenys
ENSPSIG00000003477	-	95	79.110	ENSNLEG00000006213	RBM4B	97	95.683	Nomascus_leucogenys
ENSPSIG00000003477	-	95	78.082	ENSMEUG00000001445	-	76	78.547	Notamacropus_eugenii
ENSPSIG00000003477	-	95	77.740	ENSOPRG00000009149	RBM4	76	78.201	Ochotona_princeps
ENSPSIG00000003477	-	95	78.767	ENSOPRG00000009158	RBM4B	77	80.623	Ochotona_princeps
ENSPSIG00000003477	-	94	63.158	ENSODEG00000001866	-	76	64.789	Octodon_degus
ENSPSIG00000003477	-	50	75.362	ENSODEG00000006635	-	96	75.362	Octodon_degus
ENSPSIG00000003477	-	95	79.452	ENSODEG00000017696	-	77	80.277	Octodon_degus
ENSPSIG00000003477	-	96	74.150	ENSOANG00000003143	-	59	87.719	Ornithorhynchus_anatinus
ENSPSIG00000003477	-	96	80.756	ENSOANG00000011036	-	79	81.272	Ornithorhynchus_anatinus
ENSPSIG00000003477	-	95	77.055	ENSOCUG00000004731	RBM4	80	77.509	Oryctolagus_cuniculus
ENSPSIG00000003477	-	95	79.795	ENSOCUG00000006695	LARK	77	80.969	Oryctolagus_cuniculus
ENSPSIG00000003477	-	95	77.816	ENSOGAG00000015647	RBM4	76	76.817	Otolemur_garnettii
ENSPSIG00000003477	-	95	80.137	ENSOGAG00000015648	RBM4B	77	80.969	Otolemur_garnettii
ENSPSIG00000003477	-	95	78.007	ENSOARG00000007700	RBM4	76	76.736	Ovis_aries
ENSPSIG00000003477	-	94	80.345	ENSOARG00000007759	RBM4B	76	80.969	Ovis_aries
ENSPSIG00000003477	-	95	79.110	ENSPPAG00000015125	RBM4B	97	95.683	Pan_paniscus
ENSPSIG00000003477	-	94	80.690	ENSPPRG00000003388	RBM4B	97	95.683	Panthera_pardus
ENSPSIG00000003477	-	95	77.397	ENSPPRG00000003533	RBM4	97	95.652	Panthera_pardus
ENSPSIG00000003477	-	79	85.000	ENSPTIG00000016180	RBM4	97	96.377	Panthera_tigris_altaica
ENSPSIG00000003477	-	94	80.690	ENSPTIG00000015426	RBM4B	97	95.683	Panthera_tigris_altaica
ENSPSIG00000003477	-	95	79.110	ENSPTRG00000003935	RBM4B	97	95.683	Pan_troglodytes
ENSPSIG00000003477	-	95	79.110	ENSPANG00000020672	RBM4B	97	95.683	Papio_anubis
ENSPSIG00000003477	-	93	79.861	ENSPEMG00000009144	Rbm4b	77	80.969	Peromyscus_maniculatus_bairdii
ENSPSIG00000003477	-	95	79.110	ENSPPYG00000003010	RBM4B	77	80.969	Pongo_abelii
ENSPSIG00000003477	-	95	76.370	ENSPPYG00000003012	RBM4	76	75.779	Pongo_abelii
ENSPSIG00000003477	-	95	77.700	ENSPCAG00000003393	-	76	78.125	Procavia_capensis
ENSPSIG00000003477	-	95	79.795	ENSPCOG00000027885	RBM4B	97	95.683	Propithecus_coquereli
ENSPSIG00000003477	-	95	80.836	ENSPVAG00000010487	RBM4B	77	80.969	Pteropus_vampyrus
ENSPSIG00000003477	-	95	77.397	ENSPVAG00000010486	RBM4	76	77.855	Pteropus_vampyrus
ENSPSIG00000003477	-	93	79.861	ENSRNOG00000061795	Rbm4b	77	80.969	Rattus_norvegicus
ENSPSIG00000003477	-	95	78.157	ENSRNOG00000050741	Rbm4	97	96.377	Rattus_norvegicus
ENSPSIG00000003477	-	95	79.110	ENSRBIG00000019394	RBM4B	97	95.683	Rhinopithecus_bieti
ENSPSIG00000003477	-	95	79.110	ENSRROG00000032850	RBM4B	97	95.683	Rhinopithecus_roxellana
ENSPSIG00000003477	-	50	95.745	ENSRROG00000032796	-	89	95.745	Rhinopithecus_roxellana
ENSPSIG00000003477	-	95	78.767	ENSSBOG00000034474	RBM4B	97	94.964	Saimiri_boliviensis_boliviensis
ENSPSIG00000003477	-	96	77.027	ENSSHAG00000008386	-	80	78.547	Sarcophilus_harrisii
ENSPSIG00000003477	-	95	80.139	ENSSARG00000010710	RBM4B	77	80.277	Sorex_araneus
ENSPSIG00000003477	-	95	77.397	ENSSSCG00000032437	RBM4	76	77.855	Sus_scrofa
ENSPSIG00000003477	-	95	92.334	ENSTGUG00000016779	-	92	92.226	Taeniopygia_guttata
ENSPSIG00000003477	-	95	79.452	ENSTBEG00000003748	RBM4B	77	80.623	Tupaia_belangeri
ENSPSIG00000003477	-	74	86.854	ENSTBEG00000003727	-	70	83.556	Tupaia_belangeri
ENSPSIG00000003477	-	95	77.397	ENSTTRG00000011164	RBM4	76	78.201	Tursiops_truncatus
ENSPSIG00000003477	-	95	80.137	ENSTTRG00000011166	RBM4B	77	80.969	Tursiops_truncatus
ENSPSIG00000003477	-	95	80.479	ENSUAMG00000004745	RBM4B	77	81.315	Ursus_americanus
ENSPSIG00000003477	-	95	77.397	ENSUAMG00000014882	RBM4	97	95.652	Ursus_americanus
ENSPSIG00000003477	-	79	84.583	ENSUMAG00000011738	-	97	95.652	Ursus_maritimus
ENSPSIG00000003477	-	95	78.049	ENSVPAG00000001949	RBM4	75	77.739	Vicugna_pacos
ENSPSIG00000003477	-	95	80.137	ENSVPAG00000001950	RBM4B	77	80.969	Vicugna_pacos
ENSPSIG00000003477	-	95	76.712	ENSVVUG00000010622	RBM4	76	77.163	Vulpes_vulpes
ENSPSIG00000003477	-	95	80.836	ENSVVUG00000010619	RBM4B	77	80.969	Vulpes_vulpes
ENSPSIG00000003477	-	50	84.507	ENSVVUG00000011717	-	97	84.507	Vulpes_vulpes