EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003515 (Gene tree)
Gene ID: -
Gene Symbol: ARL13A
Alias: -
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 10513 bases
Position: chrJH224639.1:1683745-1694257
Accession: 31709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003698	MMR_HSR1	PF01926.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003718	ARL13A-201	672	-	ENSPSIP00000003698	224 (aa)	-	K7F6N8

Gene Model

Click here to download ENSPSIG00000003515's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003515's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003515	ARL13A	75	33.333	ENSPSIG00000008221	ARL6	87	33.333
ENSPSIG00000003515	ARL13A	80	31.111	ENSPSIG00000014976	-	83	31.111
ENSPSIG00000003515	ARL13A	56	32.540	ENSPSIG00000004800	SAR1B	64	32.540
ENSPSIG00000003515	ARL13A	61	32.624	ENSPSIG00000000594	ARL4D	71	32.624
ENSPSIG00000003515	ARL13A	100	49.554	ENSPSIG00000018115	ARL13B	55	49.554
ENSPSIG00000003515	ARL13A	56	34.127	ENSPSIG00000014285	SAR1A	64	34.127
ENSPSIG00000003515	ARL13A	59	35.338	ENSPSIG00000013641	ARL10	84	33.784
ENSPSIG00000003515	ARL13A	58	30.882	ENSPSIG00000000003	ARL4A	68	30.882
ENSPSIG00000003515	ARL13A	69	31.613	ENSPSIG00000001265	ARL11	79	31.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003515	ARL13A	98	53.182	ENSACIG00000012235	arl13a	56	53.182	Amphilophus_citrinellus
ENSPSIG00000003515	ARL13A	100	52.000	ENSAPEG00000006626	arl13a	51	52.000	Amphiprion_percula
ENSPSIG00000003515	ARL13A	100	50.667	ENSATEG00000018113	arl13a	58	50.667	Anabas_testudineus
ENSPSIG00000003515	ARL13A	98	52.018	ENSACLG00000000738	arl13a	56	52.018	Astatotilapia_calliptera
ENSPSIG00000003515	ARL13A	100	47.321	ENSAMXG00000021495	arl13a	58	47.534	Astyanax_mexicanus
ENSPSIG00000003515	ARL13A	92	86.829	ENSCPBG00000014304	ARL13A	78	86.829	Chrysemys_picta_bellii
ENSPSIG00000003515	ARL13A	90	46.305	ENSCGRG00001021947	Arl13a	54	46.305	Cricetulus_griseus_chok1gshd
ENSPSIG00000003515	ARL13A	90	46.305	ENSCGRG00000007297	Arl13a	54	46.305	Cricetulus_griseus_crigri
ENSPSIG00000003515	ARL13A	100	47.556	ENSCSEG00000002533	arl13a	54	47.556	Cynoglossus_semilaevis
ENSPSIG00000003515	ARL13A	98	51.584	ENSCVAG00000005783	arl13a	55	51.584	Cyprinodon_variegatus
ENSPSIG00000003515	ARL13A	100	50.446	ENSDARG00000052575	arl13a	52	50.446	Danio_rerio
ENSPSIG00000003515	ARL13A	72	62.346	ENSFALG00000003829	ARL13A	100	62.346	Ficedula_albicollis
ENSPSIG00000003515	ARL13A	99	52.232	ENSFHEG00000017023	arl13a	51	52.232	Fundulus_heteroclitus
ENSPSIG00000003515	ARL13A	96	52.778	ENSGAFG00000019994	arl13a	55	52.778	Gambusia_affinis
ENSPSIG00000003515	ARL13A	96	52.778	ENSGACG00000017318	arl13a	52	52.778	Gasterosteus_aculeatus
ENSPSIG00000003515	ARL13A	98	52.018	ENSHBUG00000016100	arl13a	50	52.018	Haplochromis_burtoni
ENSPSIG00000003515	ARL13A	100	50.893	ENSHCOG00000005206	arl13a	54	50.893	Hippocampus_comes
ENSPSIG00000003515	ARL13A	100	45.982	ENSIPUG00000017720	arl13a	60	45.614	Ictalurus_punctatus
ENSPSIG00000003515	ARL13A	98	52.273	ENSKMAG00000001139	arl13a	50	52.273	Kryptolebias_marmoratus
ENSPSIG00000003515	ARL13A	100	50.667	ENSLBEG00000028724	arl13a	58	50.667	Labrus_bergylta
ENSPSIG00000003515	ARL13A	100	51.556	ENSMAMG00000020385	arl13a	54	51.556	Mastacembelus_armatus
ENSPSIG00000003515	ARL13A	98	52.018	ENSMZEG00005007052	arl13a	53	52.018	Maylandia_zebra
ENSPSIG00000003515	ARL13A	75	67.066	ENSMGAG00000004193	ARL13A	96	67.066	Meleagris_gallopavo
ENSPSIG00000003515	ARL13A	92	45.146	ENSMAUG00000010729	-	53	45.146	Mesocricetus_auratus
ENSPSIG00000003515	ARL13A	92	45.146	ENSMAUG00000001355	-	53	45.146	Mesocricetus_auratus
ENSPSIG00000003515	ARL13A	83	48.677	ENSMOCG00000005899	Arl13a	50	48.677	Microtus_ochrogaster
ENSPSIG00000003515	ARL13A	96	52.093	ENSMMOG00000000880	arl13a	56	52.093	Mola_mola
ENSPSIG00000003515	ARL13A	100	50.222	ENSMALG00000009029	arl13a	60	50.222	Monopterus_albus
ENSPSIG00000003515	ARL13A	90	48.515	MGP_CAROLIEiJ_G0033386	Arl13a	54	48.515	Mus_caroli
ENSPSIG00000003515	ARL13A	90	48.515	ENSMUSG00000052549	Arl13a	54	48.515	Mus_musculus
ENSPSIG00000003515	ARL13A	90	50.000	MGP_PahariEiJ_G0031926	Arl13a	54	50.000	Mus_pahari
ENSPSIG00000003515	ARL13A	90	48.515	MGP_SPRETEiJ_G0034551	Arl13a	54	48.515	Mus_spretus
ENSPSIG00000003515	ARL13A	98	52.941	ENSNBRG00000021766	arl13a	56	52.941	Neolamprologus_brichardi
ENSPSIG00000003515	ARL13A	98	52.273	ENSONIG00000002645	arl13a	53	52.273	Oreochromis_niloticus
ENSPSIG00000003515	ARL13A	100	52.444	ENSORLG00000001425	arl13a	51	52.444	Oryzias_latipes
ENSPSIG00000003515	ARL13A	100	52.000	ENSORLG00020021844	arl13a	51	52.000	Oryzias_latipes_hni
ENSPSIG00000003515	ARL13A	100	52.444	ENSORLG00015011862	arl13a	54	52.444	Oryzias_latipes_hsok
ENSPSIG00000003515	ARL13A	100	51.556	ENSOMEG00000015603	arl13a	51	51.556	Oryzias_melastigma
ENSPSIG00000003515	ARL13A	99	49.550	ENSPKIG00000013558	arl13a	51	49.550	Paramormyrops_kingsleyae
ENSPSIG00000003515	ARL13A	93	50.239	ENSPMGG00000017973	arl13a	58	48.000	Periophthalmus_magnuspinnatus
ENSPSIG00000003515	ARL13A	96	52.778	ENSPLAG00000011307	arl13a	55	52.778	Poecilia_latipinna
ENSPSIG00000003515	ARL13A	98	51.131	ENSPREG00000011435	arl13a	50	51.131	Poecilia_reticulata
ENSPSIG00000003515	ARL13A	98	52.018	ENSPNYG00000011485	arl13a	56	52.018	Pundamilia_nyererei
ENSPSIG00000003515	ARL13A	92	47.317	ENSRNOG00000055454	Arl13a	52	47.317	Rattus_norvegicus
ENSPSIG00000003515	ARL13A	100	51.339	ENSSFOG00015010065	arl13a	55	51.339	Scleropages_formosus
ENSPSIG00000003515	ARL13A	100	50.222	ENSSMAG00000013557	arl13a	56	50.222	Scophthalmus_maximus
ENSPSIG00000003515	ARL13A	100	51.111	ENSSDUG00000000933	arl13a	60	51.111	Seriola_dumerili
ENSPSIG00000003515	ARL13A	100	51.111	ENSSLDG00000009973	arl13a	51	51.111	Seriola_lalandi_dorsalis
ENSPSIG00000003515	ARL13A	100	51.111	ENSSPAG00000009109	arl13a	84	50.893	Stegastes_partitus
ENSPSIG00000003515	ARL13A	98	52.036	ENSXCOG00000016270	arl13a	54	52.036	Xiphophorus_couchianus
ENSPSIG00000003515	ARL13A	98	52.489	ENSXMAG00000013485	arl13a	55	52.489	Xiphophorus_maculatus