EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000003610 (Gene tree)
Gene ID: 102447200
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 8296 bases
Position: chrJH211041.1:506692-514987
Accession: 102447200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000003810	KH_1	PF00013.29	1.3e-07	1	1
ENSPSIP00000003810	zf-CCHC	PF00098.23	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000003831	SF1-201	2385	XM_006131635	ENSPSIP00000003810	495 (aa)	XP_025044698	K7F700

Gene Model

Click here to download ENSPSIG00000003610's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003610's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003610	SF1	84	82.831	ENSAMEG00000017828	SF1	54	87.179	Ailuropoda_melanoleuca
ENSPSIG00000003610	SF1	97	71.795	ENSANAG00000022607	-	66	83.206	Aotus_nancymaae
ENSPSIG00000003610	SF1	97	75.490	ENSANAG00000026664	-	71	85.855	Aotus_nancymaae
ENSPSIG00000003610	SF1	97	75.490	ENSBTAG00000001035	SF1	58	87.179	Bos_taurus
ENSPSIG00000003610	SF1	97	75.490	ENSCJAG00000002780	SF1	55	87.179	Callithrix_jacchus
ENSPSIG00000003610	SF1	84	82.710	ENSCAFG00000014239	SF1	55	87.179	Canis_familiaris
ENSPSIG00000003610	SF1	97	75.490	ENSCAFG00020014381	SF1	55	87.179	Canis_lupus_dingo
ENSPSIG00000003610	SF1	97	75.490	ENSCHIG00000025867	SF1	64	87.179	Capra_hircus
ENSPSIG00000003610	SF1	59	88.158	ENSCAPG00000010762	SF1	57	88.125	Cavia_aperea
ENSPSIG00000003610	SF1	84	82.944	ENSCPOG00000012290	SF1	65	87.464	Cavia_porcellus
ENSPSIG00000003610	SF1	97	74.704	ENSCCAG00000037881	SF1	71	85.855	Cebus_capucinus
ENSPSIG00000003610	SF1	100	69.539	ENSCCAG00000023781	-	67	75.000	Cebus_capucinus
ENSPSIG00000003610	SF1	97	75.490	ENSCATG00000011564	SF1	70	87.179	Cercocebus_atys
ENSPSIG00000003610	SF1	81	81.446	ENSCSAG00000007258	SF1	64	87.179	Chlorocebus_sabaeus
ENSPSIG00000003610	SF1	59	87.829	ENSCHOG00000006008	SF1	60	87.500	Choloepus_hoffmanni
ENSPSIG00000003610	SF1	81	98.504	ENSCPBG00000023763	SF1	52	98.504	Chrysemys_picta_bellii
ENSPSIG00000003610	SF1	81	48.175	ENSCSAVG00000009055	-	50	55.882	Ciona_savignyi
ENSPSIG00000003610	SF1	97	75.490	ENSCANG00000042201	SF1	63	90.566	Colobus_angolensis_palliatus
ENSPSIG00000003610	SF1	97	75.490	ENSCGRG00001003677	Sf1	56	87.812	Cricetulus_griseus_chok1gshd
ENSPSIG00000003610	SF1	81	81.446	ENSCGRG00000001708	Sf1	64	86.895	Cricetulus_griseus_crigri
ENSPSIG00000003610	SF1	55	87.455	ENSDARG00000008188	sf1	54	84.762	Danio_rerio
ENSPSIG00000003610	SF1	81	81.687	ENSDNOG00000001282	SF1	64	87.464	Dasypus_novemcinctus
ENSPSIG00000003610	SF1	97	75.490	ENSDORG00000016334	Sf1	55	87.179	Dipodomys_ordii
ENSPSIG00000003610	SF1	81	80.964	ENSEASG00005018272	SF1	64	86.610	Equus_asinus_asinus
ENSPSIG00000003610	SF1	81	81.205	ENSECAG00000024544	SF1	64	86.895	Equus_caballus
ENSPSIG00000003610	SF1	59	88.487	ENSEEUG00000001058	SF1	81	88.438	Erinaceus_europaeus
ENSPSIG00000003610	SF1	84	82.710	ENSFCAG00000012231	SF1	55	87.179	Felis_catus
ENSPSIG00000003610	SF1	59	87.829	ENSFDAG00000009833	SF1	57	87.812	Fukomys_damarensis
ENSPSIG00000003610	SF1	52	84.211	ENSGAFG00000019284	sf1	60	78.997	Gambusia_affinis
ENSPSIG00000003610	SF1	54	80.586	ENSGACG00000000826	sf1	56	76.061	Gasterosteus_aculeatus
ENSPSIG00000003610	SF1	81	98.753	ENSGAGG00000021691	SF1	57	98.753	Gopherus_agassizii
ENSPSIG00000003610	SF1	84	82.710	ENSHGLG00000009541	SF1	56	87.812	Heterocephalus_glaber_female
ENSPSIG00000003610	SF1	70	80.516	ENSHGLG00100008076	-	69	81.395	Heterocephalus_glaber_male
ENSPSIG00000003610	SF1	68	77.901	ENSHGLG00100008255	-	74	76.796	Heterocephalus_glaber_male
ENSPSIG00000003610	SF1	59	87.829	ENSHGLG00100013879	-	57	87.812	Heterocephalus_glaber_male
ENSPSIG00000003610	SF1	69	83.714	ENSSTOG00000024353	-	61	80.428	Ictidomys_tridecemlineatus
ENSPSIG00000003610	SF1	97	75.490	ENSSTOG00000009790	-	56	87.179	Ictidomys_tridecemlineatus
ENSPSIG00000003610	SF1	97	75.686	ENSJJAG00000011788	Sf1	55	87.464	Jaculus_jaculus
ENSPSIG00000003610	SF1	60	88.449	ENSLACG00000018493	SF1	57	87.107	Latimeria_chalumnae
ENSPSIG00000003610	SF1	84	82.477	ENSLAFG00000007201	SF1	54	86.895	Loxodonta_africana
ENSPSIG00000003610	SF1	97	75.490	ENSMFAG00000033122	SF1	69	87.179	Macaca_fascicularis
ENSPSIG00000003610	SF1	97	75.490	ENSMMUG00000022606	SF1	73	87.417	Macaca_mulatta
ENSPSIG00000003610	SF1	97	75.490	ENSMNEG00000037901	SF1	69	87.179	Macaca_nemestrina
ENSPSIG00000003610	SF1	97	75.490	ENSMLEG00000040706	SF1	69	87.179	Mandrillus_leucophaeus
ENSPSIG00000003610	SF1	84	82.710	ENSMAUG00000014064	Sf1	56	87.812	Mesocricetus_auratus
ENSPSIG00000003610	SF1	97	74.853	ENSMICG00000001202	SF1	63	90.226	Microcebus_murinus
ENSPSIG00000003610	SF1	84	82.944	ENSMOCG00000022038	Sf1	56	88.125	Microtus_ochrogaster
ENSPSIG00000003610	SF1	60	86.885	ENSMODG00000029407	SF1	69	87.500	Monodelphis_domestica
ENSPSIG00000003610	SF1	52	84.556	ENSMALG00000020521	sf1	52	81.672	Monopterus_albus
ENSPSIG00000003610	SF1	97	76.078	MGP_CAROLIEiJ_G0022607	Sf1	67	99.438	Mus_caroli
ENSPSIG00000003610	SF1	97	76.078	ENSMUSG00000024949	Sf1	67	99.438	Mus_musculus
ENSPSIG00000003610	SF1	97	76.078	MGP_PahariEiJ_G0014101	Sf1	67	99.438	Mus_pahari
ENSPSIG00000003610	SF1	97	76.078	MGP_SPRETEiJ_G0023518	Sf1	67	99.438	Mus_spretus
ENSPSIG00000003610	SF1	97	75.686	ENSMPUG00000012684	SF1	55	87.464	Mustela_putorius_furo
ENSPSIG00000003610	SF1	67	83.090	ENSMLUG00000029800	-	58	81.765	Myotis_lucifugus
ENSPSIG00000003610	SF1	97	75.098	ENSMLUG00000015217	-	55	86.895	Myotis_lucifugus
ENSPSIG00000003610	SF1	84	82.944	ENSNGAG00000005550	Sf1	56	88.125	Nannospalax_galili
ENSPSIG00000003610	SF1	52	84.674	ENSNBRG00000017606	sf1	53	88.571	Neolamprologus_brichardi
ENSPSIG00000003610	SF1	81	82.609	ENSNLEG00000005236	-	63	90.566	Nomascus_leucogenys
ENSPSIG00000003610	SF1	81	81.928	ENSMEUG00000013424	SF1	66	87.464	Notamacropus_eugenii
ENSPSIG00000003610	SF1	81	81.687	ENSOPRG00000005008	SF1	71	87.464	Ochotona_princeps
ENSPSIG00000003610	SF1	84	76.471	ENSODEG00000006102	-	55	84.046	Octodon_degus
ENSPSIG00000003610	SF1	72	79.891	ENSOANG00000002909	SF1	86	80.398	Ornithorhynchus_anatinus
ENSPSIG00000003610	SF1	84	82.710	ENSOCUG00000026486	SF1	56	87.179	Oryctolagus_cuniculus
ENSPSIG00000003610	SF1	84	82.710	ENSOGAG00000016196	SF1	55	87.179	Otolemur_garnettii
ENSPSIG00000003610	SF1	97	75.490	ENSPPAG00000002799	-	71	86.895	Pan_paniscus
ENSPSIG00000003610	SF1	97	75.490	ENSPPRG00000013566	SF1	57	86.895	Panthera_pardus
ENSPSIG00000003610	SF1	59	87.829	ENSPTIG00000016141	SF1	57	87.812	Panthera_tigris_altaica
ENSPSIG00000003610	SF1	95	72.349	ENSPTRG00000003846	SF1	73	87.619	Pan_troglodytes
ENSPSIG00000003610	SF1	84	81.986	ENSPANG00000020754	SF1	70	87.179	Papio_anubis
ENSPSIG00000003610	SF1	57	79.661	ENSPKIG00000012116	sf1	81	75.851	Paramormyrops_kingsleyae
ENSPSIG00000003610	SF1	84	82.710	ENSPEMG00000010463	Sf1	56	87.812	Peromyscus_maniculatus_bairdii
ENSPSIG00000003610	SF1	97	75.835	ENSPCIG00000018173	SF1	55	87.179	Phascolarctos_cinereus
ENSPSIG00000003610	SF1	52	86.822	ENSPFOG00000013683	sf1	51	82.958	Poecilia_formosa
ENSPSIG00000003610	SF1	84	82.710	ENSPPYG00000003098	-	66	87.179	Pongo_abelii
ENSPSIG00000003610	SF1	81	81.205	ENSPCAG00000013631	SF1	52	86.895	Procavia_capensis
ENSPSIG00000003610	SF1	97	74.853	ENSPCOG00000027546	SF1	71	86.932	Propithecus_coquereli
ENSPSIG00000003610	SF1	81	81.687	ENSPVAG00000016938	SF1	53	87.464	Pteropus_vampyrus
ENSPSIG00000003610	SF1	97	76.078	ENSRNOG00000021085	Sf1	70	87.179	Rattus_norvegicus
ENSPSIG00000003610	SF1	69	86.969	ENSRBIG00000042818	SF1	63	89.811	Rhinopithecus_bieti
ENSPSIG00000003610	SF1	100	69.763	ENSRROG00000045655	SF1	71	87.179	Rhinopithecus_roxellana
ENSPSIG00000003610	SF1	97	66.469	ENSSBOG00000022267	-	80	75.214	Saimiri_boliviensis_boliviensis
ENSPSIG00000003610	SF1	81	76.755	ENSSARG00000008180	SF1	67	83.761	Sorex_araneus
ENSPSIG00000003610	SF1	81	86.085	ENSSPUG00000012907	SF1	61	87.879	Sphenodon_punctatus
ENSPSIG00000003610	SF1	97	75.490	ENSSSCG00000013021	SF1	67	86.040	Sus_scrofa
ENSPSIG00000003610	SF1	79	64.128	ENSTNIG00000004820	sf1	61	74.613	Tetraodon_nigroviridis
ENSPSIG00000003610	SF1	69	80.845	ENSTBEG00000013133	SF1	52	80.845	Tupaia_belangeri
ENSPSIG00000003610	SF1	81	79.469	ENSTTRG00000008857	SF1	64	86.176	Tursiops_truncatus
ENSPSIG00000003610	SF1	97	75.889	ENSUAMG00000011977	SF1	66	86.628	Ursus_americanus
ENSPSIG00000003610	SF1	69	88.761	ENSUMAG00000007268	SF1	67	87.179	Ursus_maritimus
ENSPSIG00000003610	SF1	81	81.446	ENSVVUG00000028585	SF1	64	87.179	Vulpes_vulpes
ENSPSIG00000003610	SF1	52	86.207	ENSXCOG00000003704	sf1	59	82.637	Xiphophorus_couchianus