EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPSIG00000003823 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
18947 bases
Position
chrJH207539.1:3420025-3438971
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000004050CSDPF00313.225e-5013
ENSPSIP00000004050CSDPF00313.225e-5023
ENSPSIP00000004050CSDPF00313.225e-5033
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000004073CSDE1-2011500-ENSPSIP00000004050471 (aa)-K7F7P0
Gene Model
Click here to download ENSPSIG00000003823's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003823's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000003823CSDE19695.354ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPSIG00000003823CSDE19678.602ENSAPOG00000015538csde19678.602Acanthochromis_polyacanthus
ENSPSIG00000003823CSDE19688.053ENSAMEG00000017129CSDE19188.053Ailuropoda_melanoleuca
ENSPSIG00000003823CSDE19082.677ENSACIG00000015175csde19982.677Amphilophus_citrinellus
ENSPSIG00000003823CSDE19678.814ENSAOCG00000011510csde19677.483Amphiprion_ocellaris
ENSPSIG00000003823CSDE19682.119ENSAPEG00000007194csde19678.814Amphiprion_percula
ENSPSIG00000003823CSDE19677.313ENSATEG00000003864csde19677.313Anabas_testudineus
ENSPSIG00000003823CSDE19690.222ENSAPLG00000008797CSDE19590.222Anas_platyrhynchos
ENSPSIG00000003823CSDE19697.333ENSACAG00000003120CSDE19697.333Anolis_carolinensis
ENSPSIG00000003823CSDE16671.769ENSANAG00000028396-8971.769Aotus_nancymaae
ENSPSIG00000003823CSDE19695.133ENSANAG00000024665CSDE19195.133Aotus_nancymaae
ENSPSIG00000003823CSDE19681.015ENSACLG00000013296csde19681.678Astatotilapia_calliptera
ENSPSIG00000003823CSDE19676.754ENSAMXG00000007436csde19376.754Astyanax_mexicanus
ENSPSIG00000003823CSDE19695.354ENSBTAG00000000678CSDE19195.354Bos_taurus
ENSPSIG00000003823CSDE19695.354ENSCJAG00000012565CSDE19195.354Callithrix_jacchus
ENSPSIG00000003823CSDE19688.717ENSCAFG00000009618CSDE19288.717Canis_familiaris
ENSPSIG00000003823CSDE19688.717ENSCAFG00020000481CSDE19688.717Canis_lupus_dingo
ENSPSIG00000003823CSDE19695.354ENSCHIG00000017250CSDE19195.354Capra_hircus
ENSPSIG00000003823CSDE19695.796ENSTSYG00000003747CSDE19695.796Carlito_syrichta
ENSPSIG00000003823CSDE19695.092ENSCAPG00000015128CSDE19095.092Cavia_aperea
ENSPSIG00000003823CSDE19686.283ENSCPOG00000040388CSDE19686.283Cavia_porcellus
ENSPSIG00000003823CSDE19695.354ENSCCAG00000036794CSDE19695.354Cebus_capucinus
ENSPSIG00000003823CSDE19069.903ENSCCAG00000030878-7969.903Cebus_capucinus
ENSPSIG00000003823CSDE19167.391ENSCCAG00000033677-8967.391Cebus_capucinus
ENSPSIG00000003823CSDE19695.354ENSCATG00000036962CSDE19195.354Cercocebus_atys
ENSPSIG00000003823CSDE19695.354ENSCLAG00000006618CSDE19695.354Chinchilla_lanigera
ENSPSIG00000003823CSDE19695.354ENSCSAG00000001658CSDE19195.354Chlorocebus_sabaeus
ENSPSIG00000003823CSDE19697.087ENSCHOG00000000918CSDE15797.087Choloepus_hoffmanni
ENSPSIG00000003823CSDE19699.111ENSCPBG00000016547CSDE19699.111Chrysemys_picta_bellii
ENSPSIG00000003823CSDE19447.111ENSCING00000014465-9147.111Ciona_intestinalis
ENSPSIG00000003823CSDE19446.309ENSCSAVG00000008100-9346.309Ciona_savignyi
ENSPSIG00000003823CSDE19695.354ENSCANG00000035096CSDE19195.354Colobus_angolensis_palliatus
ENSPSIG00000003823CSDE19491.509ENSCANG00000031069-9393.208Colobus_angolensis_palliatus
ENSPSIG00000003823CSDE19694.912ENSCGRG00001016833-9694.912Cricetulus_griseus_chok1gshd
ENSPSIG00000003823CSDE19669.690ENSCGRG00001014011-9369.690Cricetulus_griseus_chok1gshd
ENSPSIG00000003823CSDE19189.320ENSCGRG00000002225-9389.320Cricetulus_griseus_crigri
ENSPSIG00000003823CSDE19673.563ENSCGRG00000005831-9273.563Cricetulus_griseus_crigri
ENSPSIG00000003823CSDE19677.542ENSCSEG00000002620csde19675.938Cynoglossus_semilaevis
ENSPSIG00000003823CSDE19682.119ENSCVAG00000001344csde19682.159Cyprinodon_variegatus
ENSPSIG00000003823CSDE19681.978ENSDARG00000074758csde110079.286Danio_rerio
ENSPSIG00000003823CSDE18173.043ENSDNOG00000034464-9573.043Dasypus_novemcinctus
ENSPSIG00000003823CSDE19688.521ENSDNOG00000010287-8988.521Dasypus_novemcinctus
ENSPSIG00000003823CSDE19694.469ENSDORG00000011609Csde19694.469Dipodomys_ordii
ENSPSIG00000003823CSDE19250.337FBgn0263352Unr6750.111Drosophila_melanogaster
ENSPSIG00000003823CSDE19682.301ENSETEG00000006280-8782.301Echinops_telfairi
ENSPSIG00000003823CSDE19571.556ENSETEG00000013678-9171.556Echinops_telfairi
ENSPSIG00000003823CSDE18867.054ENSETEG00000007109-6167.054Echinops_telfairi
ENSPSIG00000003823CSDE19494.215ENSETEG00000002491-7094.215Echinops_telfairi
ENSPSIG00000003823CSDE19656.774ENSEBUG00000008647csde19353.768Eptatretus_burgeri
ENSPSIG00000003823CSDE19695.796ENSEASG00005006284CSDE19695.796Equus_asinus_asinus
ENSPSIG00000003823CSDE19794.978ENSECAG00000020885CSDE19695.796Equus_caballus
ENSPSIG00000003823CSDE19587.429ENSEEUG00000006286CSDE16687.429Erinaceus_europaeus
ENSPSIG00000003823CSDE19678.105ENSELUG00000015507csde19675.328Esox_lucius
ENSPSIG00000003823CSDE19695.575ENSFCAG00000029266CSDE19195.575Felis_catus
ENSPSIG00000003823CSDE19696.000ENSFALG00000003407CSDE19596.000Ficedula_albicollis
ENSPSIG00000003823CSDE19695.354ENSFDAG00000007882CSDE19695.354Fukomys_damarensis
ENSPSIG00000003823CSDE19979.747ENSFHEG00000010799csde19682.159Fundulus_heteroclitus
ENSPSIG00000003823CSDE19680.795ENSGMOG00000012731csde19680.795Gadus_morhua
ENSPSIG00000003823CSDE19696.667ENSGALG00000002139CSDE19996.667Gallus_gallus
ENSPSIG00000003823CSDE19677.753ENSGAFG00000005241csde19377.753Gambusia_affinis
ENSPSIG00000003823CSDE19681.498ENSGACG00000004544csde19681.498Gasterosteus_aculeatus
ENSPSIG00000003823CSDE19698.667ENSGAGG00000017685CSDE19698.667Gopherus_agassizii
ENSPSIG00000003823CSDE19695.354ENSGGOG00000002164CSDE19195.354Gorilla_gorilla
ENSPSIG00000003823CSDE19483.217ENSHBUG00000020315csde19677.042Haplochromis_burtoni
ENSPSIG00000003823CSDE19680.088ENSHGLG00000000650-9380.088Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19681.195ENSHGLG00000003829-9681.195Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19086.408ENSHGLG00000010039-8686.408Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19680.088ENSHGLG00000007471-9080.088Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19676.549ENSHGLG00000019549-9276.549Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19483.962ENSHGLG00000008555-9383.962Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19695.354ENSHGLG00000009620-7295.354Heterocephalus_glaber_female
ENSPSIG00000003823CSDE19680.310ENSHGLG00100007287-9080.310Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19688.326ENSHGLG00100002245-6888.326Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19667.478ENSHGLG00100001846-9867.478Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19695.354ENSHGLG00100019438-9695.354Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19676.106ENSHGLG00100012072-9476.106Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19072.535ENSHGLG00100004195-9972.535Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19079.612ENSHGLG00100004833-8979.612Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19085.437ENSHGLG00100006910-8685.437Heterocephalus_glaber_male
ENSPSIG00000003823CSDE19679.691ENSHCOG00000004158csde19675.055Hippocampus_comes
ENSPSIG00000003823CSDE19675.439ENSIPUG00000000355csde19675.439Ictalurus_punctatus
ENSPSIG00000003823CSDE19680.353ENSSTOG00000032722-9980.353Ictidomys_tridecemlineatus
ENSPSIG00000003823CSDE19473.991ENSSTOG00000030994-9673.991Ictidomys_tridecemlineatus
ENSPSIG00000003823CSDE19694.912ENSJJAG00000019571Csde19694.912Jaculus_jaculus
ENSPSIG00000003823CSDE19681.057ENSKMAG00000005685csde19681.057Kryptolebias_marmoratus
ENSPSIG00000003823CSDE19678.647ENSLBEG00000014770csde19677.313Labrus_bergylta
ENSPSIG00000003823CSDE19689.404ENSLACG00000018452CSDE18789.404Latimeria_chalumnae
ENSPSIG00000003823CSDE19685.144ENSLOCG00000010413csde19185.144Lepisosteus_oculatus
ENSPSIG00000003823CSDE19688.496ENSLAFG00000007150CSDE19288.496Loxodonta_africana
ENSPSIG00000003823CSDE19695.354ENSMFAG00000003674CSDE19195.354Macaca_fascicularis
ENSPSIG00000003823CSDE19695.354ENSMMUG00000001974CSDE19988.496Macaca_mulatta
ENSPSIG00000003823CSDE19695.354ENSMNEG00000045247CSDE19195.354Macaca_nemestrina
ENSPSIG00000003823CSDE19695.354ENSMLEG00000038673CSDE19195.354Mandrillus_leucophaeus
ENSPSIG00000003823CSDE19976.829ENSMAMG00000008821csde19677.483Mastacembelus_armatus
ENSPSIG00000003823CSDE19483.217ENSMZEG00005021675csde19281.678Maylandia_zebra
ENSPSIG00000003823CSDE19696.889ENSMGAG00000016381CSDE19996.889Meleagris_gallopavo
ENSPSIG00000003823CSDE19694.912ENSMAUG00000014031Csde19694.912Mesocricetus_auratus
ENSPSIG00000003823CSDE19695.133ENSMICG00000002050CSDE19195.133Microcebus_murinus
ENSPSIG00000003823CSDE19694.912ENSMOCG00000018960Csde19694.912Microtus_ochrogaster
ENSPSIG00000003823CSDE19677.533ENSMMOG00000015075csde19377.533Mola_mola
ENSPSIG00000003823CSDE19696.460ENSMODG00000004685CSDE19696.460Monodelphis_domestica
ENSPSIG00000003823CSDE19677.093ENSMALG00000007132csde19677.093Monopterus_albus
ENSPSIG00000003823CSDE19694.912MGP_CAROLIEiJ_G0025444Csde19795.205Mus_caroli
ENSPSIG00000003823CSDE19694.912ENSMUSG00000068823Csde19795.205Mus_musculus
ENSPSIG00000003823CSDE19694.912MGP_PahariEiJ_G0026888Csde19795.205Mus_pahari
ENSPSIG00000003823CSDE19694.912MGP_SPRETEiJ_G0026394Csde19795.205Mus_spretus
ENSPSIG00000003823CSDE19695.575ENSMPUG00000005753CSDE19895.575Mustela_putorius_furo
ENSPSIG00000003823CSDE19687.832ENSMLUG00000005681CSDE19187.832Myotis_lucifugus
ENSPSIG00000003823CSDE19046.078ENSNGAG00000012599-8246.078Nannospalax_galili
ENSPSIG00000003823CSDE19695.133ENSNGAG00000021929Csde19695.133Nannospalax_galili
ENSPSIG00000003823CSDE19676.380ENSNBRG00000020808csde19677.042Neolamprologus_brichardi
ENSPSIG00000003823CSDE19695.133ENSNLEG00000004842CSDE19195.133Nomascus_leucogenys
ENSPSIG00000003823CSDE19699.029ENSMEUG00000002677CSDE19499.029Notamacropus_eugenii
ENSPSIG00000003823CSDE19497.087ENSOPRG00000005002CSDE17497.087Ochotona_princeps
ENSPSIG00000003823CSDE19694.690ENSODEG00000007383-9694.690Octodon_degus
ENSPSIG00000003823CSDE19076.636ENSODEG00000005979-6076.636Octodon_degus
ENSPSIG00000003823CSDE19677.754ENSONIG00000009309csde19678.390Oreochromis_niloticus
ENSPSIG00000003823CSDE19696.903ENSOANG00000003346-7396.903Ornithorhynchus_anatinus
ENSPSIG00000003823CSDE19695.133ENSOCUG00000016438CSDE19195.133Oryctolagus_cuniculus
ENSPSIG00000003823CSDE19975.764ENSORLG00000000707csde19677.707Oryzias_latipes
ENSPSIG00000003823CSDE19680.973ENSORLG00020005148csde19677.707Oryzias_latipes_hni
ENSPSIG00000003823CSDE19680.973ENSORLG00015019415csde19677.707Oryzias_latipes_hsok
ENSPSIG00000003823CSDE19681.236ENSOMEG00000015656csde19677.966Oryzias_melastigma
ENSPSIG00000003823CSDE19689.159ENSOGAG00000012127CSDE19189.159Otolemur_garnettii
ENSPSIG00000003823CSDE19688.496ENSOARG00000020034CSDE19188.496Ovis_aries
ENSPSIG00000003823CSDE19695.354ENSPPAG00000025861CSDE19195.354Pan_paniscus
ENSPSIG00000003823CSDE19695.575ENSPPRG00000006747CSDE19195.575Panthera_pardus
ENSPSIG00000003823CSDE19695.575ENSPTIG00000015468CSDE19695.575Panthera_tigris_altaica
ENSPSIG00000003823CSDE19695.354ENSPTRG00000033721CSDE19695.354Pan_troglodytes
ENSPSIG00000003823CSDE19695.354ENSPANG00000018873CSDE19195.354Papio_anubis
ENSPSIG00000003823CSDE19675.717ENSPKIG00000009459csde19675.717Paramormyrops_kingsleyae
ENSPSIG00000003823CSDE19577.162ENSPMGG00000000772csde19677.162Periophthalmus_magnuspinnatus
ENSPSIG00000003823CSDE19695.133ENSPEMG00000020357-9695.133Peromyscus_maniculatus_bairdii
ENSPSIG00000003823CSDE19696.681ENSPCIG00000022587CSDE19696.681Phascolarctos_cinereus
ENSPSIG00000003823CSDE19481.818ENSPFOG00000012664csde19681.818Poecilia_formosa
ENSPSIG00000003823CSDE19472.188ENSPLAG00000017680csde19172.188Poecilia_latipinna
ENSPSIG00000003823CSDE19471.875ENSPMEG00000005094csde19371.875Poecilia_mexicana
ENSPSIG00000003823CSDE19680.778ENSPREG00000011631csde19677.593Poecilia_reticulata
ENSPSIG00000003823CSDE19695.133ENSPPYG00000000996CSDE19695.133Pongo_abelii
ENSPSIG00000003823CSDE19698.058ENSPCAG00000014368CSDE18798.058Procavia_capensis
ENSPSIG00000003823CSDE19695.133ENSPCOG00000017893CSDE19695.133Propithecus_coquereli
ENSPSIG00000003823CSDE19481.716ENSPCOG00000008223-8981.716Propithecus_coquereli
ENSPSIG00000003823CSDE19687.611ENSPVAG00000008225CSDE18787.611Pteropus_vampyrus
ENSPSIG00000003823CSDE19483.217ENSPNYG00000013745csde19677.042Pundamilia_nyererei
ENSPSIG00000003823CSDE19681.798ENSPNAG00000001958csde18981.758Pygocentrus_nattereri
ENSPSIG00000003823CSDE19694.690ENSRNOG00000061058Csde19694.690Rattus_norvegicus
ENSPSIG00000003823CSDE19689.823ENSRBIG00000038088-9687.619Rhinopithecus_bieti
ENSPSIG00000003823CSDE19687.859ENSRBIG00000038966-9187.859Rhinopithecus_bieti
ENSPSIG00000003823CSDE19695.354ENSRROG00000043101CSDE19195.354Rhinopithecus_roxellana
ENSPSIG00000003823CSDE19695.354ENSSBOG00000035592CSDE19195.354Saimiri_boliviensis_boliviensis
ENSPSIG00000003823CSDE19689.823ENSSHAG00000009831CSDE19689.823Sarcophilus_harrisii
ENSPSIG00000003823CSDE19481.069ENSSFOG00015007498csde19681.057Scleropages_formosus
ENSPSIG00000003823CSDE19975.813ENSSMAG00000007203csde19677.966Scophthalmus_maximus
ENSPSIG00000003823CSDE19976.220ENSSDUG00000015380csde19677.042Seriola_dumerili
ENSPSIG00000003823CSDE19681.678ENSSLDG00000008819csde19681.678Seriola_lalandi_dorsalis
ENSPSIG00000003823CSDE19689.159ENSSARG00000000738CSDE19089.159Sorex_araneus
ENSPSIG00000003823CSDE19698.000ENSSPUG00000008714CSDE19698.000Sphenodon_punctatus
ENSPSIG00000003823CSDE19683.002ENSSPAG00000000716csde19283.002Stegastes_partitus
ENSPSIG00000003823CSDE19695.796ENSSSCG00000006752CSDE19195.796Sus_scrofa
ENSPSIG00000003823CSDE19695.796ENSTGUG00000000972CSDE19595.796Taeniopygia_guttata
ENSPSIG00000003823CSDE19676.327ENSTRUG00000007996csde19376.327Takifugu_rubripes
ENSPSIG00000003823CSDE19183.270ENSTNIG00000010878csde110083.270Tetraodon_nigroviridis
ENSPSIG00000003823CSDE19688.053ENSTTRG00000015583CSDE19188.053Tursiops_truncatus
ENSPSIG00000003823CSDE19296.040ENSUAMG00000021779-9796.040Ursus_americanus
ENSPSIG00000003823CSDE19483.929ENSUAMG00000024289-9983.929Ursus_americanus
ENSPSIG00000003823CSDE19186.667ENSUMAG00000011714-9286.667Ursus_maritimus
ENSPSIG00000003823CSDE19682.743ENSUMAG00000009720-9282.743Ursus_maritimus
ENSPSIG00000003823CSDE19687.611ENSVPAG00000000749CSDE15287.611Vicugna_pacos
ENSPSIG00000003823CSDE19695.575ENSVVUG00000009890CSDE17995.575Vulpes_vulpes
ENSPSIG00000003823CSDE19692.274ENSXETG00000021448csde19692.274Xenopus_tropicalis
ENSPSIG00000003823CSDE19677.533ENSXCOG00000000035csde19977.533Xiphophorus_couchianus
ENSPSIG00000003823CSDE19682.561ENSXMAG00000009080csde19679.281Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us