EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000003849 (Gene tree)
Gene ID: 102445095
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 20420 bases
Position: chrJH210915.1:774398-794817
Accession: 102445095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004081	CMS1	PF14617.6	8.2e-33	1	1
ENSPSIP00000004081	DEAD	PF00270.29	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004104	CMSS1-201	690	XM_006130686	ENSPSIP00000004081	229 (aa)	XP_006130748	K7F7S1

Gene Model

Click here to download ENSPSIG00000003849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003849	CMSS1	100	72.052	ENSG00000184220	CMSS1	99	79.012	Homo_sapiens
ENSPSIG00000003849	CMSS1	88	65.842	ENSAPOG00000010604	cmss1	82	65.842	Acanthochromis_polyacanthus
ENSPSIG00000003849	CMSS1	100	71.739	ENSAMEG00000004092	CMSS1	89	71.739	Ailuropoda_melanoleuca
ENSPSIG00000003849	CMSS1	88	56.931	ENSACIG00000021854	cmss1	87	54.545	Amphilophus_citrinellus
ENSPSIG00000003849	CMSS1	88	64.851	ENSAOCG00000013361	cmss1	70	64.851	Amphiprion_ocellaris
ENSPSIG00000003849	CMSS1	88	64.851	ENSAPEG00000005829	cmss1	70	64.851	Amphiprion_percula
ENSPSIG00000003849	CMSS1	90	65.049	ENSATEG00000008209	cmss1	79	61.572	Anabas_testudineus
ENSPSIG00000003849	CMSS1	100	83.913	ENSAPLG00000010542	CMSS1	100	83.913	Anas_platyrhynchos
ENSPSIG00000003849	CMSS1	100	81.974	ENSACAG00000011065	CMSS1	85	81.974	Anolis_carolinensis
ENSPSIG00000003849	CMSS1	100	72.052	ENSANAG00000023565	CMSS1	87	72.052	Aotus_nancymaae
ENSPSIG00000003849	CMSS1	88	65.347	ENSACLG00000027294	cmss1	69	65.347	Astatotilapia_calliptera
ENSPSIG00000003849	CMSS1	99	56.957	ENSAMXG00000002046	cmss1	69	59.901	Astyanax_mexicanus
ENSPSIG00000003849	CMSS1	99	71.930	ENSBTAG00000013663	CMSS1	83	71.930	Bos_taurus
ENSPSIG00000003849	CMSS1	100	72.926	ENSCJAG00000000610	CMSS1	87	72.926	Callithrix_jacchus
ENSPSIG00000003849	CMSS1	100	72.926	ENSCAFG00000009230	CMSS1	83	72.926	Canis_familiaris
ENSPSIG00000003849	CMSS1	88	71.782	ENSCAFG00020024156	-	62	71.782	Canis_lupus_dingo
ENSPSIG00000003849	CMSS1	100	72.926	ENSCAFG00020009464	-	84	72.926	Canis_lupus_dingo
ENSPSIG00000003849	CMSS1	99	71.930	ENSCHIG00000013003	CMSS1	83	71.930	Capra_hircus
ENSPSIG00000003849	CMSS1	100	71.179	ENSTSYG00000009266	CMSS1	88	71.179	Carlito_syrichta
ENSPSIG00000003849	CMSS1	97	60.090	ENSCAPG00000013584	CMSS1	87	66.667	Cavia_aperea
ENSPSIG00000003849	CMSS1	100	72.489	ENSCPOG00000014680	CMSS1	82	72.489	Cavia_porcellus
ENSPSIG00000003849	CMSS1	100	72.926	ENSCCAG00000034685	CMSS1	87	72.926	Cebus_capucinus
ENSPSIG00000003849	CMSS1	100	73.362	ENSCATG00000031980	CMSS1	88	73.362	Cercocebus_atys
ENSPSIG00000003849	CMSS1	100	72.926	ENSCLAG00000011241	CMSS1	98	72.926	Chinchilla_lanigera
ENSPSIG00000003849	CMSS1	100	73.362	ENSCSAG00000006024	CMSS1	93	73.362	Chlorocebus_sabaeus
ENSPSIG00000003849	CMSS1	100	54.585	ENSCHOG00000012098	CMSS1	83	54.585	Choloepus_hoffmanni
ENSPSIG00000003849	CMSS1	97	41.150	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSPSIG00000003849	CMSS1	55	44.444	ENSCSAVG00000002309	-	99	44.444	Ciona_savignyi
ENSPSIG00000003849	CMSS1	100	72.926	ENSCANG00000031337	CMSS1	88	72.926	Colobus_angolensis_palliatus
ENSPSIG00000003849	CMSS1	100	73.362	ENSCGRG00001014305	Cmss1	82	73.362	Cricetulus_griseus_chok1gshd
ENSPSIG00000003849	CMSS1	100	73.799	ENSCGRG00000006722	Cmss1	89	73.799	Cricetulus_griseus_crigri
ENSPSIG00000003849	CMSS1	88	67.327	ENSCSEG00000004958	cmss1	69	67.327	Cynoglossus_semilaevis
ENSPSIG00000003849	CMSS1	88	65.347	ENSCVAG00000005039	cmss1	70	65.347	Cyprinodon_variegatus
ENSPSIG00000003849	CMSS1	99	56.277	ENSDARG00000112579	cmss1	79	56.277	Danio_rerio
ENSPSIG00000003849	CMSS1	100	71.179	ENSDNOG00000040418	CMSS1	83	71.179	Dasypus_novemcinctus
ENSPSIG00000003849	CMSS1	100	73.799	ENSDORG00000010461	Cmss1	82	73.799	Dipodomys_ordii
ENSPSIG00000003849	CMSS1	58	50.758	ENSEBUG00000002156	-	96	50.758	Eptatretus_burgeri
ENSPSIG00000003849	CMSS1	100	71.179	ENSEASG00005010966	CMSS1	99	71.689	Equus_asinus_asinus
ENSPSIG00000003849	CMSS1	100	70.742	ENSECAG00000015662	CMSS1	99	70.354	Equus_caballus
ENSPSIG00000003849	CMSS1	99	50.877	ENSEEUG00000007624	-	82	51.316	Erinaceus_europaeus
ENSPSIG00000003849	CMSS1	88	62.376	ENSELUG00000019459	cmss1	75	60.619	Esox_lucius
ENSPSIG00000003849	CMSS1	100	73.362	ENSFCAG00000044577	CMSS1	82	73.362	Felis_catus
ENSPSIG00000003849	CMSS1	100	81.659	ENSFALG00000005816	CMSS1	97	81.659	Ficedula_albicollis
ENSPSIG00000003849	CMSS1	99	70.614	ENSFDAG00000012577	CMSS1	100	70.614	Fukomys_damarensis
ENSPSIG00000003849	CMSS1	99	58.696	ENSFHEG00000012008	cmss1	95	58.696	Fundulus_heteroclitus
ENSPSIG00000003849	CMSS1	88	64.356	ENSGMOG00000016729	cmss1	72	64.356	Gadus_morhua
ENSPSIG00000003849	CMSS1	100	84.279	ENSGALG00000015267	CMSS1	88	84.279	Gallus_gallus
ENSPSIG00000003849	CMSS1	90	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSPSIG00000003849	CMSS1	95	61.468	ENSGACG00000002798	cmss1	78	61.468	Gasterosteus_aculeatus
ENSPSIG00000003849	CMSS1	100	92.140	ENSGAGG00000019861	CMSS1	89	92.140	Gopherus_agassizii
ENSPSIG00000003849	CMSS1	100	72.926	ENSGGOG00000014125	CMSS1	88	72.926	Gorilla_gorilla
ENSPSIG00000003849	CMSS1	88	65.347	ENSHBUG00000008431	cmss1	71	65.347	Haplochromis_burtoni
ENSPSIG00000003849	CMSS1	99	73.009	ENSHGLG00000019481	CMSS1	92	73.009	Heterocephalus_glaber_female
ENSPSIG00000003849	CMSS1	99	73.009	ENSHGLG00100010314	CMSS1	91	73.009	Heterocephalus_glaber_male
ENSPSIG00000003849	CMSS1	100	61.472	ENSHCOG00000003222	cmss1	78	61.472	Hippocampus_comes
ENSPSIG00000003849	CMSS1	96	60.909	ENSIPUG00000011591	cmss1	76	60.909	Ictalurus_punctatus
ENSPSIG00000003849	CMSS1	100	72.489	ENSSTOG00000019366	CMSS1	82	72.489	Ictidomys_tridecemlineatus
ENSPSIG00000003849	CMSS1	100	71.179	ENSJJAG00000014894	Cmss1	90	73.267	Jaculus_jaculus
ENSPSIG00000003849	CMSS1	88	60.396	ENSKMAG00000002390	cmss1	81	59.406	Kryptolebias_marmoratus
ENSPSIG00000003849	CMSS1	88	61.084	ENSLBEG00000006298	cmss1	83	61.084	Labrus_bergylta
ENSPSIG00000003849	CMSS1	99	70.000	ENSLACG00000009293	CMSS1	100	70.000	Latimeria_chalumnae
ENSPSIG00000003849	CMSS1	99	59.649	ENSLOCG00000009391	cmss1	81	59.649	Lepisosteus_oculatus
ENSPSIG00000003849	CMSS1	99	71.930	ENSLAFG00000017509	CMSS1	100	71.930	Loxodonta_africana
ENSPSIG00000003849	CMSS1	100	72.926	ENSMFAG00000045006	CMSS1	88	72.926	Macaca_fascicularis
ENSPSIG00000003849	CMSS1	100	72.489	ENSMMUG00000002939	CMSS1	97	72.603	Macaca_mulatta
ENSPSIG00000003849	CMSS1	100	72.926	ENSMNEG00000031315	CMSS1	88	72.926	Macaca_nemestrina
ENSPSIG00000003849	CMSS1	100	73.799	ENSMLEG00000033660	CMSS1	88	73.799	Mandrillus_leucophaeus
ENSPSIG00000003849	CMSS1	88	64.851	ENSMAMG00000017176	cmss1	70	64.851	Mastacembelus_armatus
ENSPSIG00000003849	CMSS1	88	65.347	ENSMZEG00005021886	cmss1	69	65.347	Maylandia_zebra
ENSPSIG00000003849	CMSS1	99	83.772	ENSMGAG00000014360	CMSS1	100	83.772	Meleagris_gallopavo
ENSPSIG00000003849	CMSS1	100	49.785	ENSMAUG00000020609	Cmss1	78	49.785	Mesocricetus_auratus
ENSPSIG00000003849	CMSS1	100	71.179	ENSMICG00000048977	CMSS1	88	71.179	Microcebus_murinus
ENSPSIG00000003849	CMSS1	100	71.616	ENSMOCG00000021937	Cmss1	83	71.616	Microtus_ochrogaster
ENSPSIG00000003849	CMSS1	88	63.861	ENSMMOG00000019794	cmss1	84	63.861	Mola_mola
ENSPSIG00000003849	CMSS1	100	76.419	ENSMODG00000002275	CMSS1	86	76.419	Monodelphis_domestica
ENSPSIG00000003849	CMSS1	95	65.297	ENSMALG00000004250	cmss1	75	65.297	Monopterus_albus
ENSPSIG00000003849	CMSS1	100	74.348	MGP_CAROLIEiJ_G0020824	Cmss1	83	74.348	Mus_caroli
ENSPSIG00000003849	CMSS1	100	74.348	ENSMUSG00000022748	Cmss1	83	74.348	Mus_musculus
ENSPSIG00000003849	CMSS1	100	73.913	MGP_PahariEiJ_G0016524	Cmss1	83	73.913	Mus_pahari
ENSPSIG00000003849	CMSS1	100	74.348	MGP_SPRETEiJ_G0021724	Cmss1	83	74.348	Mus_spretus
ENSPSIG00000003849	CMSS1	99	73.246	ENSMPUG00000011324	CMSS1	88	73.246	Mustela_putorius_furo
ENSPSIG00000003849	CMSS1	100	72.727	ENSMLUG00000001131	CMSS1	88	72.727	Myotis_lucifugus
ENSPSIG00000003849	CMSS1	100	71.179	ENSNGAG00000020316	Cmss1	82	71.179	Nannospalax_galili
ENSPSIG00000003849	CMSS1	88	65.347	ENSNBRG00000003095	cmss1	69	65.347	Neolamprologus_brichardi
ENSPSIG00000003849	CMSS1	100	72.926	ENSNLEG00000034172	CMSS1	88	72.926	Nomascus_leucogenys
ENSPSIG00000003849	CMSS1	99	65.789	ENSMEUG00000014505	CMSS1	100	65.789	Notamacropus_eugenii
ENSPSIG00000003849	CMSS1	100	74.236	ENSOPRG00000002986	CMSS1	82	74.236	Ochotona_princeps
ENSPSIG00000003849	CMSS1	100	60.699	ENSODEG00000001853	-	82	60.699	Octodon_degus
ENSPSIG00000003849	CMSS1	99	69.298	ENSODEG00000003558	-	84	69.298	Octodon_degus
ENSPSIG00000003849	CMSS1	100	72.052	ENSODEG00000005226	-	82	72.052	Octodon_degus
ENSPSIG00000003849	CMSS1	95	61.009	ENSODEG00000009446	-	85	61.009	Octodon_degus
ENSPSIG00000003849	CMSS1	88	64.356	ENSONIG00000006678	cmss1	89	60.606	Oreochromis_niloticus
ENSPSIG00000003849	CMSS1	100	80.786	ENSOANG00000007529	CMSS1	100	79.399	Ornithorhynchus_anatinus
ENSPSIG00000003849	CMSS1	100	73.362	ENSOCUG00000025366	CMSS1	83	73.362	Oryctolagus_cuniculus
ENSPSIG00000003849	CMSS1	88	64.851	ENSORLG00000020340	cmss1	71	64.851	Oryzias_latipes
ENSPSIG00000003849	CMSS1	100	52.402	ENSORLG00020012235	cmss1	97	52.838	Oryzias_latipes_hni
ENSPSIG00000003849	CMSS1	88	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSPSIG00000003849	CMSS1	88	65.347	ENSOMEG00000012555	cmss1	70	65.347	Oryzias_melastigma
ENSPSIG00000003849	CMSS1	99	71.053	ENSOGAG00000002045	CMSS1	100	71.053	Otolemur_garnettii
ENSPSIG00000003849	CMSS1	99	72.052	ENSOARG00000017899	CMSS1	79	72.052	Ovis_aries
ENSPSIG00000003849	CMSS1	100	72.926	ENSPPAG00000038515	CMSS1	84	72.926	Pan_paniscus
ENSPSIG00000003849	CMSS1	100	73.362	ENSPPRG00000016767	CMSS1	82	73.362	Panthera_pardus
ENSPSIG00000003849	CMSS1	100	72.926	ENSPTIG00000018274	CMSS1	82	72.926	Panthera_tigris_altaica
ENSPSIG00000003849	CMSS1	100	72.489	ENSPTRG00000015157	CMSS1	93	72.489	Pan_troglodytes
ENSPSIG00000003849	CMSS1	99	73.246	ENSPANG00000019980	CMSS1	91	73.246	Papio_anubis
ENSPSIG00000003849	CMSS1	99	61.304	ENSPKIG00000012609	cmss1	75	67.327	Paramormyrops_kingsleyae
ENSPSIG00000003849	CMSS1	88	62.562	ENSPMGG00000010286	cmss1	87	62.562	Periophthalmus_magnuspinnatus
ENSPSIG00000003849	CMSS1	100	72.052	ENSPEMG00000016384	Cmss1	82	72.052	Peromyscus_maniculatus_bairdii
ENSPSIG00000003849	CMSS1	89	54.902	ENSPMAG00000001146	cmss1	99	55.446	Petromyzon_marinus
ENSPSIG00000003849	CMSS1	100	75.983	ENSPCIG00000015656	CMSS1	87	75.983	Phascolarctos_cinereus
ENSPSIG00000003849	CMSS1	88	62.871	ENSPFOG00000016849	cmss1	71	62.871	Poecilia_formosa
ENSPSIG00000003849	CMSS1	88	62.376	ENSPLAG00000008323	cmss1	71	62.376	Poecilia_latipinna
ENSPSIG00000003849	CMSS1	88	62.871	ENSPMEG00000021020	cmss1	70	62.871	Poecilia_mexicana
ENSPSIG00000003849	CMSS1	88	61.881	ENSPREG00000007618	cmss1	69	61.881	Poecilia_reticulata
ENSPSIG00000003849	CMSS1	100	72.926	ENSPPYG00000013606	CMSS1	84	72.926	Pongo_abelii
ENSPSIG00000003849	CMSS1	100	71.179	ENSPCOG00000020035	CMSS1	88	71.179	Propithecus_coquereli
ENSPSIG00000003849	CMSS1	100	63.319	ENSPVAG00000017031	CMSS1	82	63.319	Pteropus_vampyrus
ENSPSIG00000003849	CMSS1	77	67.614	ENSPNYG00000013428	cmss1	65	67.614	Pundamilia_nyererei
ENSPSIG00000003849	CMSS1	99	57.826	ENSPNAG00000007912	cmss1	78	59.565	Pygocentrus_nattereri
ENSPSIG00000003849	CMSS1	100	73.043	ENSRNOG00000027888	Cmss1	89	73.043	Rattus_norvegicus
ENSPSIG00000003849	CMSS1	100	72.926	ENSRBIG00000037931	CMSS1	88	72.926	Rhinopithecus_bieti
ENSPSIG00000003849	CMSS1	100	72.926	ENSRROG00000042910	CMSS1	88	72.926	Rhinopithecus_roxellana
ENSPSIG00000003849	CMSS1	100	71.616	ENSSBOG00000030980	CMSS1	87	71.616	Saimiri_boliviensis_boliviensis
ENSPSIG00000003849	CMSS1	100	77.293	ENSSHAG00000009321	CMSS1	91	77.293	Sarcophilus_harrisii
ENSPSIG00000003849	CMSS1	99	63.913	ENSSFOG00015001509	cmss1	79	63.913	Scleropages_formosus
ENSPSIG00000003849	CMSS1	88	66.337	ENSSMAG00000001653	cmss1	69	66.337	Scophthalmus_maximus
ENSPSIG00000003849	CMSS1	88	65.842	ENSSDUG00000007719	cmss1	81	60.776	Seriola_dumerili
ENSPSIG00000003849	CMSS1	90	65.217	ENSSLDG00000012300	cmss1	68	65.842	Seriola_lalandi_dorsalis
ENSPSIG00000003849	CMSS1	100	60.699	ENSSARG00000003584	CMSS1	82	60.699	Sorex_araneus
ENSPSIG00000003849	CMSS1	99	87.168	ENSSPUG00000003865	CMSS1	100	87.168	Sphenodon_punctatus
ENSPSIG00000003849	CMSS1	90	66.990	ENSSPAG00000019182	cmss1	63	67.327	Stegastes_partitus
ENSPSIG00000003849	CMSS1	100	72.926	ENSSSCG00000011970	CMSS1	82	72.926	Sus_scrofa
ENSPSIG00000003849	CMSS1	100	81.659	ENSTGUG00000013635	CMSS1	100	81.659	Taeniopygia_guttata
ENSPSIG00000003849	CMSS1	88	64.356	ENSTRUG00000015265	cmss1	72	64.356	Takifugu_rubripes
ENSPSIG00000003849	CMSS1	88	59.406	ENSTNIG00000002880	cmss1	83	57.018	Tetraodon_nigroviridis
ENSPSIG00000003849	CMSS1	99	49.561	ENSTBEG00000016722	CMSS1	81	49.561	Tupaia_belangeri
ENSPSIG00000003849	CMSS1	100	68.559	ENSTTRG00000001562	CMSS1	82	68.559	Tursiops_truncatus
ENSPSIG00000003849	CMSS1	100	72.926	ENSUAMG00000024209	CMSS1	100	72.646	Ursus_americanus
ENSPSIG00000003849	CMSS1	100	72.052	ENSUMAG00000001983	CMSS1	88	72.052	Ursus_maritimus
ENSPSIG00000003849	CMSS1	99	58.333	ENSVPAG00000000263	CMSS1	57	75.625	Vicugna_pacos
ENSPSIG00000003849	CMSS1	88	73.762	ENSVVUG00000007776	-	80	73.762	Vulpes_vulpes
ENSPSIG00000003849	CMSS1	100	73.362	ENSVVUG00000021647	-	93	73.362	Vulpes_vulpes
ENSPSIG00000003849	CMSS1	97	66.968	ENSXETG00000011858	cmss1	79	66.968	Xenopus_tropicalis
ENSPSIG00000003849	CMSS1	91	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSPSIG00000003849	CMSS1	91	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus