EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003895 (Gene tree)
Gene ID: 102456016
Gene Symbol: -
Alias: -
Full Name: calnexin
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 27634 bases
Position: chrJH224652.1:1176342-1203975
Accession: 102456016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004155	Calreticulin	PF00262.18	1.3e-165	1	1
ENSPSIP00000004150	Calreticulin	PF00262.18	2.4e-165	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004173	-	6558	XM_006138210	ENSPSIP00000004150	606 (aa)	XP_006138275	K7F7Z0
ENSPSIT00000004178	-	1716	-	ENSPSIP00000004155	572 (aa)	-	K7F7Z5

Gene Model

Click here to download ENSPSIG00000003895's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss04141	Protein processing in endoplasmic reticulum	KEGG
pss04145	Phagosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003895	-	68	36.387	ENSPSIG00000013549	CALR3	86	36.364
ENSPSIG00000003895	-	60	39.542	ENSPSIG00000012928	-	75	39.542
ENSPSIG00000003895	-	92	65.047	ENSPSIG00000009344	-	81	65.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003895	-	60	39.193	ENSAMXG00000018577	-	69	39.769	Astyanax_mexicanus
ENSPSIG00000003895	-	69	38.791	ENSCAFG00000017093	CALR	82	38.750	Canis_familiaris
ENSPSIG00000003895	-	60	40.058	ENSCPBG00000023916	-	79	40.058	Chrysemys_picta_bellii
ENSPSIG00000003895	-	69	37.717	ENSDARG00000103979	calr3a	81	37.965	Danio_rerio
ENSPSIG00000003895	-	67	37.662	FBgn0005585	Calr	79	37.662	Drosophila_melanogaster
ENSPSIG00000003895	-	80	54.906	FBgn0264077	Cnx14D	75	54.697	Drosophila_melanogaster
ENSPSIG00000003895	-	70	37.717	ENSEBUG00000008568	calr3a	79	37.811	Eptatretus_burgeri
ENSPSIG00000003895	-	60	38.953	ENSELUG00000008294	-	75	39.535	Esox_lucius
ENSPSIG00000003895	-	60	40.936	ENSFHEG00000000123	-	69	41.159	Fundulus_heteroclitus
ENSPSIG00000003895	-	71	38.480	ENSMAMG00000003716	-	80	39.120	Mastacembelus_armatus
ENSPSIG00000003895	-	71	37.621	ENSMMOG00000020031	-	82	37.745	Mola_mola
ENSPSIG00000003895	-	69	39.043	ENSMLUG00000012776	-	80	39.000	Myotis_lucifugus
ENSPSIG00000003895	-	56	39.815	ENSORLG00000017171	-	75	40.432	Oryzias_latipes
ENSPSIG00000003895	-	72	38.889	ENSOMEG00000010424	-	83	39.518	Oryzias_melastigma
ENSPSIG00000003895	-	60	39.542	ENSPNAG00000016813	-	69	40.634	Pygocentrus_nattereri
ENSPSIG00000003895	-	68	36.896	ENSSMAG00000005047	calr3a	72	38.304	Scophthalmus_maximus
ENSPSIG00000003895	-	80	68.737	ENSSDUG00000002378	-	65	68.590	Seriola_dumerili
ENSPSIG00000003895	-	89	61.047	ENSSLDG00000020527	-	79	65.646	Seriola_lalandi_dorsalis
ENSPSIG00000003895	-	69	39.295	ENSTRUG00000004597	-	77	39.295	Takifugu_rubripes
ENSPSIG00000003895	-	90	62.243	ENSTRUG00000003449	-	68	65.644	Takifugu_rubripes
ENSPSIG00000003895	-	69	37.783	ENSXETG00000007937	calr	80	37.688	Xenopus_tropicalis