EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000003965 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 25843 bases
Position: chrJH211918.1:12170-38012
Accession: 102453031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004207	Ago_hook	PF10427.9	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004230	TNRC6A-201	5211	XM_006133831	ENSPSIP00000004207	1414 (aa)	-	K7F847

Gene Model

Click here to download ENSPSIG00000003965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000003965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000003965	TNRC6A	90	37.491	ENSPSIG00000005318	TNRC6B	73	37.958
ENSPSIG00000003965	TNRC6A	99	42.142	ENSPSIG00000018069	TNRC6C	86	42.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000003965	TNRC6A	100	77.635	ENSG00000090905	TNRC6A	100	92.547	Homo_sapiens
ENSPSIG00000003965	TNRC6A	100	75.670	ENSAMEG00000009333	TNRC6A	79	75.605	Ailuropoda_melanoleuca
ENSPSIG00000003965	TNRC6A	100	83.913	ENSAPLG00000009978	TNRC6A	81	84.348	Anas_platyrhynchos
ENSPSIG00000003965	TNRC6A	99	55.041	ENSACAG00000011857	TNRC6A	79	56.040	Anolis_carolinensis
ENSPSIG00000003965	TNRC6A	100	77.297	ENSANAG00000025252	TNRC6A	77	77.297	Aotus_nancymaae
ENSPSIG00000003965	TNRC6A	100	55.206	ENSAMXG00000019919	tnrc6a	89	54.784	Astyanax_mexicanus
ENSPSIG00000003965	TNRC6A	100	78.285	ENSBTAG00000017999	TNRC6A	79	77.230	Bos_taurus
ENSPSIG00000003965	TNRC6A	100	77.432	ENSCJAG00000020677	TNRC6A	75	77.432	Callithrix_jacchus
ENSPSIG00000003965	TNRC6A	100	78.311	ENSCAFG00000017531	TNRC6A	78	78.311	Canis_familiaris
ENSPSIG00000003965	TNRC6A	100	76.892	ENSCAFG00020021160	TNRC6A	79	76.824	Canis_lupus_dingo
ENSPSIG00000003965	TNRC6A	100	77.973	ENSCHIG00000019448	TNRC6A	83	77.500	Capra_hircus
ENSPSIG00000003965	TNRC6A	100	77.703	ENSTSYG00000012711	TNRC6A	77	77.703	Carlito_syrichta
ENSPSIG00000003965	TNRC6A	100	77.568	ENSCPOG00000036684	TNRC6A	77	77.568	Cavia_porcellus
ENSPSIG00000003965	TNRC6A	100	77.568	ENSCCAG00000033664	TNRC6A	77	77.568	Cebus_capucinus
ENSPSIG00000003965	TNRC6A	100	77.635	ENSCATG00000019284	TNRC6A	77	77.635	Cercocebus_atys
ENSPSIG00000003965	TNRC6A	100	75.084	ENSCLAG00000010217	TNRC6A	77	75.000	Chinchilla_lanigera
ENSPSIG00000003965	TNRC6A	100	75.147	ENSCSAG00000006561	TNRC6A	77	75.082	Chlorocebus_sabaeus
ENSPSIG00000003965	TNRC6A	93	92.810	ENSCHOG00000009374	TNRC6A	70	92.810	Choloepus_hoffmanni
ENSPSIG00000003965	TNRC6A	100	90.828	ENSCPBG00000001881	TNRC6A	85	90.828	Chrysemys_picta_bellii
ENSPSIG00000003965	TNRC6A	100	77.635	ENSCANG00000041549	TNRC6A	77	77.635	Colobus_angolensis_palliatus
ENSPSIG00000003965	TNRC6A	99	77.079	ENSCGRG00001015021	Tnrc6a	77	77.214	Cricetulus_griseus_chok1gshd
ENSPSIG00000003965	TNRC6A	99	76.606	ENSCGRG00000013351	Tnrc6a	77	76.741	Cricetulus_griseus_crigri
ENSPSIG00000003965	TNRC6A	100	55.577	ENSDARG00000079688	tnrc6a	85	55.840	Danio_rerio
ENSPSIG00000003965	TNRC6A	100	74.217	ENSDNOG00000013989	TNRC6A	79	74.151	Dasypus_novemcinctus
ENSPSIG00000003965	TNRC6A	100	67.605	ENSETEG00000014658	TNRC6A	78	67.605	Echinops_telfairi
ENSPSIG00000003965	TNRC6A	100	77.380	ENSEASG00005017693	TNRC6A	83	75.098	Equus_asinus_asinus
ENSPSIG00000003965	TNRC6A	100	77.380	ENSECAG00000025056	TNRC6A	83	75.098	Equus_caballus
ENSPSIG00000003965	TNRC6A	100	69.346	ENSEEUG00000004530	TNRC6A	78	69.346	Erinaceus_europaeus
ENSPSIG00000003965	TNRC6A	100	77.568	ENSFCAG00000025236	TNRC6A	77	77.568	Felis_catus
ENSPSIG00000003965	TNRC6A	100	82.450	ENSFALG00000003757	TNRC6A	77	83.311	Ficedula_albicollis
ENSPSIG00000003965	TNRC6A	100	86.876	ENSGALG00000006068	TNRC6A	85	87.765	Gallus_gallus
ENSPSIG00000003965	TNRC6A	100	90.389	ENSGAGG00000023209	TNRC6A	85	90.389	Gopherus_agassizii
ENSPSIG00000003965	TNRC6A	100	77.635	ENSGGOG00000005137	TNRC6A	77	77.635	Gorilla_gorilla
ENSPSIG00000003965	TNRC6A	100	75.743	ENSHGLG00000012474	-	77	75.676	Heterocephalus_glaber_female
ENSPSIG00000003965	TNRC6A	99	59.184	ENSHGLG00000007368	-	75	58.816	Heterocephalus_glaber_female
ENSPSIG00000003965	TNRC6A	99	75.610	ENSHGLG00100012496	-	78	75.542	Heterocephalus_glaber_male
ENSPSIG00000003965	TNRC6A	100	75.823	ENSSTOG00000023394	TNRC6A	76	75.758	Ictidomys_tridecemlineatus
ENSPSIG00000003965	TNRC6A	100	67.806	ENSLACG00000006277	TNRC6A	81	67.871	Latimeria_chalumnae
ENSPSIG00000003965	TNRC6A	100	75.110	ENSLOCG00000005517	tnrc6a	73	75.110	Lepisosteus_oculatus
ENSPSIG00000003965	TNRC6A	100	77.043	ENSLAFG00000004209	TNRC6A	79	77.245	Loxodonta_africana
ENSPSIG00000003965	TNRC6A	100	74.411	ENSMFAG00000003824	TNRC6A	78	74.411	Macaca_fascicularis
ENSPSIG00000003965	TNRC6A	100	77.703	ENSMMUG00000020428	TNRC6A	77	77.703	Macaca_mulatta
ENSPSIG00000003965	TNRC6A	100	77.635	ENSMNEG00000034854	TNRC6A	76	77.635	Macaca_nemestrina
ENSPSIG00000003965	TNRC6A	100	74.280	ENSMLEG00000042737	TNRC6A	76	74.280	Mandrillus_leucophaeus
ENSPSIG00000003965	TNRC6A	100	83.432	ENSMGAG00000006455	TNRC6A	77	83.736	Meleagris_gallopavo
ENSPSIG00000003965	TNRC6A	99	77.282	ENSMAUG00000012750	Tnrc6a	77	77.417	Mesocricetus_auratus
ENSPSIG00000003965	TNRC6A	100	78.176	ENSMICG00000030685	TNRC6A	77	78.176	Microcebus_murinus
ENSPSIG00000003965	TNRC6A	99	77.537	ENSMOCG00000000152	Tnrc6a	77	77.470	Microtus_ochrogaster
ENSPSIG00000003965	TNRC6A	100	76.783	ENSMODG00000016348	TNRC6A	76	76.913	Monodelphis_domestica
ENSPSIG00000003965	TNRC6A	99	77.402	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	74.098	Mus_caroli
ENSPSIG00000003965	TNRC6A	99	77.673	ENSMUSG00000052707	Tnrc6a	99	74.381	Mus_musculus
ENSPSIG00000003965	TNRC6A	99	77.605	MGP_PahariEiJ_G0013635	Tnrc6a	100	74.381	Mus_pahari
ENSPSIG00000003965	TNRC6A	99	75.246	MGP_SPRETEiJ_G0031539	Tnrc6a	100	74.452	Mus_spretus
ENSPSIG00000003965	TNRC6A	100	72.461	ENSMPUG00000012324	TNRC6A	81	72.052	Mustela_putorius_furo
ENSPSIG00000003965	TNRC6A	100	73.839	ENSMLUG00000002701	TNRC6A	80	73.774	Myotis_lucifugus
ENSPSIG00000003965	TNRC6A	100	77.380	ENSNGAG00000020702	Tnrc6a	77	77.380	Nannospalax_galili
ENSPSIG00000003965	TNRC6A	100	76.332	ENSNLEG00000011851	TNRC6A	78	76.264	Nomascus_leucogenys
ENSPSIG00000003965	TNRC6A	86	76.796	ENSMEUG00000015959	-	68	76.796	Notamacropus_eugenii
ENSPSIG00000003965	TNRC6A	97	92.537	ENSOPRG00000005819	TNRC6A	72	92.537	Ochotona_princeps
ENSPSIG00000003965	TNRC6A	100	73.684	ENSODEG00000012802	TNRC6A	78	74.426	Octodon_degus
ENSPSIG00000003965	TNRC6A	100	77.931	ENSOANG00000007672	TNRC6A	89	77.865	Ornithorhynchus_anatinus
ENSPSIG00000003965	TNRC6A	100	74.820	ENSOCUG00000004325	TNRC6A	82	74.755	Oryctolagus_cuniculus
ENSPSIG00000003965	TNRC6A	100	75.441	ENSOGAG00000006666	TNRC6A	78	75.376	Otolemur_garnettii
ENSPSIG00000003965	TNRC6A	100	78.243	ENSOARG00000017950	TNRC6A	84	77.770	Ovis_aries
ENSPSIG00000003965	TNRC6A	100	77.635	ENSPPAG00000028379	TNRC6A	76	77.635	Pan_paniscus
ENSPSIG00000003965	TNRC6A	100	77.635	ENSPPRG00000005861	TNRC6A	77	77.635	Panthera_pardus
ENSPSIG00000003965	TNRC6A	100	77.703	ENSPTIG00000006346	TNRC6A	76	77.703	Panthera_tigris_altaica
ENSPSIG00000003965	TNRC6A	100	75.213	ENSPTRG00000007898	TNRC6A	78	75.147	Pan_troglodytes
ENSPSIG00000003965	TNRC6A	100	80.251	ENSPANG00000018523	TNRC6A	76	80.251	Papio_anubis
ENSPSIG00000003965	TNRC6A	100	54.648	ENSPKIG00000012859	tnrc6a	89	54.517	Paramormyrops_kingsleyae
ENSPSIG00000003965	TNRC6A	99	77.116	ENSPEMG00000016318	Tnrc6a	77	77.048	Peromyscus_maniculatus_bairdii
ENSPSIG00000003965	TNRC6A	100	81.050	ENSPCIG00000012106	TNRC6A	79	81.118	Phascolarctos_cinereus
ENSPSIG00000003965	TNRC6A	100	75.082	ENSPPYG00000007202	TNRC6A	77	75.016	Pongo_abelii
ENSPSIG00000003965	TNRC6A	89	93.694	ENSPCAG00000008260	TNRC6A	66	93.694	Procavia_capensis
ENSPSIG00000003965	TNRC6A	100	75.473	ENSPCOG00000010134	TNRC6A	76	75.473	Propithecus_coquereli
ENSPSIG00000003965	TNRC6A	85	60.061	ENSPVAG00000012066	TNRC6A	75	60.518	Pteropus_vampyrus
ENSPSIG00000003965	TNRC6A	99	78.093	ENSRNOG00000024737	Tnrc6a	76	78.026	Rattus_norvegicus
ENSPSIG00000003965	TNRC6A	100	77.703	ENSRBIG00000014222	TNRC6A	78	77.703	Rhinopithecus_bieti
ENSPSIG00000003965	TNRC6A	100	75.213	ENSRROG00000032360	TNRC6A	77	75.147	Rhinopithecus_roxellana
ENSPSIG00000003965	TNRC6A	100	75.494	ENSSBOG00000036197	TNRC6A	89	74.886	Saimiri_boliviensis_boliviensis
ENSPSIG00000003965	TNRC6A	100	79.046	ENSSHAG00000008811	TNRC6A	85	79.705	Sarcophilus_harrisii
ENSPSIG00000003965	TNRC6A	100	57.430	ENSSFOG00015008920	tnrc6a	82	73.068	Scleropages_formosus
ENSPSIG00000003965	TNRC6A	68	69.892	ENSSARG00000002479	TNRC6A	64	69.892	Sorex_araneus
ENSPSIG00000003965	TNRC6A	100	80.678	ENSSPUG00000010525	TNRC6A	85	80.610	Sphenodon_punctatus
ENSPSIG00000003965	TNRC6A	100	79.101	ENSSSCG00000038870	TNRC6A	88	78.514	Sus_scrofa
ENSPSIG00000003965	TNRC6A	100	84.375	ENSTGUG00000006142	TNRC6A	78	84.496	Taeniopygia_guttata
ENSPSIG00000003965	TNRC6A	100	72.400	ENSTBEG00000014965	TNRC6A	79	72.335	Tupaia_belangeri
ENSPSIG00000003965	TNRC6A	91	75.401	ENSTTRG00000002008	TNRC6A	71	75.294	Tursiops_truncatus
ENSPSIG00000003965	TNRC6A	79	77.571	ENSUAMG00000006656	-	69	77.571	Ursus_americanus
ENSPSIG00000003965	TNRC6A	100	78.897	ENSUMAG00000008274	TNRC6A	88	78.897	Ursus_maritimus
ENSPSIG00000003965	TNRC6A	100	78.243	ENSVVUG00000005380	TNRC6A	83	75.670	Vulpes_vulpes
ENSPSIG00000003965	TNRC6A	99	63.873	ENSXETG00000030437	TNRC6A	82	63.418	Xenopus_tropicalis