EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000004177 (Gene tree)
Gene ID: 102444002
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 38284 bases
Position: chrJH211075.1:528755-567038
Accession: 102444002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004452	ResIII	PF04851.15	1.7e-11	1	1
ENSPSIP00000004452	DEAD	PF00270.29	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004477	SMARCA5-201	2991	XM_006131799	ENSPSIP00000004452	996 (aa)	-	K7F8U2

Gene Model

Click here to download ENSPSIG00000004177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000004177	SMARCA5	57	44.077	ENSPSIG00000012595	CHD1L	61	44.077
ENSPSIG00000004177	SMARCA5	50	48.606	ENSPSIG00000005462	HELLS	66	48.606
ENSPSIG00000004177	SMARCA5	99	84.600	ENSPSIG00000010101	SMARCA1	99	86.200

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004177	SMARCA5	100	95.988	ENSG00000153147	SMARCA5	95	95.988	Homo_sapiens
ENSPSIG00000004177	SMARCA5	100	96.289	ENSAMEG00000009585	SMARCA5	95	96.289	Ailuropoda_melanoleuca
ENSPSIG00000004177	SMARCA5	96	95.483	ENSAPLG00000009206	SMARCA5	100	95.483	Anas_platyrhynchos
ENSPSIG00000004177	SMARCA5	100	95.085	ENSACAG00000003038	SMARCA5	96	95.085	Anolis_carolinensis
ENSPSIG00000004177	SMARCA5	100	95.888	ENSANAG00000019345	SMARCA5	99	95.687	Aotus_nancymaae
ENSPSIG00000004177	SMARCA5	100	96.189	ENSBTAG00000003399	SMARCA5	95	96.189	Bos_taurus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSCJAG00000002735	SMARCA5	95	95.988	Callithrix_jacchus
ENSPSIG00000004177	SMARCA5	100	96.289	ENSCAFG00000007525	SMARCA5	95	96.289	Canis_familiaris
ENSPSIG00000004177	SMARCA5	98	96.315	ENSCAFG00020025641	SMARCA5	94	96.315	Canis_lupus_dingo
ENSPSIG00000004177	SMARCA5	100	96.189	ENSCHIG00000013730	-	95	96.189	Capra_hircus
ENSPSIG00000004177	SMARCA5	100	94.483	ENSCHIG00000016375	-	96	94.483	Capra_hircus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSTSYG00000009954	SMARCA5	99	96.177	Carlito_syrichta
ENSPSIG00000004177	SMARCA5	97	95.562	ENSCAPG00000013747	SMARCA5	95	95.562	Cavia_aperea
ENSPSIG00000004177	SMARCA5	100	95.787	ENSCPOG00000002259	SMARCA5	95	95.787	Cavia_porcellus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSCCAG00000027215	SMARCA5	99	95.787	Cebus_capucinus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSCATG00000044917	SMARCA5	95	95.988	Cercocebus_atys
ENSPSIG00000004177	SMARCA5	99	95.875	ENSCLAG00000006153	SMARCA5	100	95.875	Chinchilla_lanigera
ENSPSIG00000004177	SMARCA5	97	95.979	ENSCSAG00000003448	SMARCA5	100	95.979	Chlorocebus_sabaeus
ENSPSIG00000004177	SMARCA5	91	96.429	ENSCHOG00000011724	SMARCA5	86	96.429	Choloepus_hoffmanni
ENSPSIG00000004177	SMARCA5	100	96.790	ENSCPBG00000027535	SMARCA5	96	96.790	Chrysemys_picta_bellii
ENSPSIG00000004177	SMARCA5	100	95.988	ENSCANG00000041629	SMARCA5	95	95.988	Colobus_angolensis_palliatus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSCGRG00001012719	Smarca5	94	95.988	Cricetulus_griseus_chok1gshd
ENSPSIG00000004177	SMARCA5	100	95.888	ENSCGRG00000001417	Smarca5	99	96.076	Cricetulus_griseus_crigri
ENSPSIG00000004177	SMARCA5	100	93.581	ENSDNOG00000009158	SMARCA5	95	93.581	Dasypus_novemcinctus
ENSPSIG00000004177	SMARCA5	95	87.671	ENSDORG00000003466	Smarca5	97	87.671	Dipodomys_ordii
ENSPSIG00000004177	SMARCA5	97	83.798	ENSEBUG00000014773	SMARCA5	96	83.798	Eptatretus_burgeri
ENSPSIG00000004177	SMARCA5	100	96.289	ENSEASG00005001866	SMARCA5	98	95.763	Equus_asinus_asinus
ENSPSIG00000004177	SMARCA5	100	96.289	ENSECAG00000002676	SMARCA5	95	96.289	Equus_caballus
ENSPSIG00000004177	SMARCA5	99	91.650	ENSEEUG00000013176	SMARCA5	100	91.650	Erinaceus_europaeus
ENSPSIG00000004177	SMARCA5	97	87.216	ENSELUG00000014653	SMARCA5	99	87.216	Esox_lucius
ENSPSIG00000004177	SMARCA5	100	96.289	ENSFCAG00000004544	SMARCA5	95	96.289	Felis_catus
ENSPSIG00000004177	SMARCA5	97	96.082	ENSFALG00000004987	SMARCA5	100	96.082	Ficedula_albicollis
ENSPSIG00000004177	SMARCA5	99	96.076	ENSFDAG00000021016	SMARCA5	100	96.076	Fukomys_damarensis
ENSPSIG00000004177	SMARCA5	98	87.410	ENSGMOG00000007519	SMARCA5	94	87.410	Gadus_morhua
ENSPSIG00000004177	SMARCA5	99	96.586	ENSGALG00000009913	SMARCA5	96	96.586	Gallus_gallus
ENSPSIG00000004177	SMARCA5	98	88.639	ENSGACG00000017238	SMARCA5	95	88.639	Gasterosteus_aculeatus
ENSPSIG00000004177	SMARCA5	100	96.891	ENSGAGG00000019882	SMARCA5	96	96.891	Gopherus_agassizii
ENSPSIG00000004177	SMARCA5	100	95.988	ENSGGOG00000012595	SMARCA5	99	95.976	Gorilla_gorilla
ENSPSIG00000004177	SMARCA5	100	95.888	ENSHGLG00000000816	-	95	95.888	Heterocephalus_glaber_female
ENSPSIG00000004177	SMARCA5	100	86.359	ENSHGLG00000000317	-	95	86.359	Heterocephalus_glaber_female
ENSPSIG00000004177	SMARCA5	99	96.069	ENSHGLG00100018421	-	100	95.976	Heterocephalus_glaber_male
ENSPSIG00000004177	SMARCA5	100	96.289	ENSSTOG00000010683	SMARCA5	94	96.289	Ictidomys_tridecemlineatus
ENSPSIG00000004177	SMARCA5	100	95.687	ENSJJAG00000014965	Smarca5	95	95.687	Jaculus_jaculus
ENSPSIG00000004177	SMARCA5	99	93.353	ENSLACG00000007091	SMARCA5	98	93.353	Latimeria_chalumnae
ENSPSIG00000004177	SMARCA5	99	90.457	ENSLOCG00000008966	SMARCA5	96	90.457	Lepisosteus_oculatus
ENSPSIG00000004177	SMARCA5	100	96.289	ENSLAFG00000007795	SMARCA5	95	96.289	Loxodonta_africana
ENSPSIG00000004177	SMARCA5	100	95.988	ENSMFAG00000043649	SMARCA5	95	95.988	Macaca_fascicularis
ENSPSIG00000004177	SMARCA5	100	95.988	ENSMMUG00000000829	SMARCA5	97	95.996	Macaca_mulatta
ENSPSIG00000004177	SMARCA5	100	95.988	ENSMNEG00000031916	SMARCA5	95	95.988	Macaca_nemestrina
ENSPSIG00000004177	SMARCA5	100	95.988	ENSMLEG00000042393	SMARCA5	95	95.988	Mandrillus_leucophaeus
ENSPSIG00000004177	SMARCA5	99	96.482	ENSMGAG00000003517	SMARCA5	99	96.482	Meleagris_gallopavo
ENSPSIG00000004177	SMARCA5	99	96.076	ENSMAUG00000015902	Smarca5	98	96.076	Mesocricetus_auratus
ENSPSIG00000004177	SMARCA5	100	96.088	ENSMICG00000003971	SMARCA5	99	94.500	Microcebus_murinus
ENSPSIG00000004177	SMARCA5	100	95.787	ENSMOCG00000016986	-	95	95.787	Microtus_ochrogaster
ENSPSIG00000004177	SMARCA5	100	96.389	ENSMODG00000000391	SMARCA5	95	96.389	Monodelphis_domestica
ENSPSIG00000004177	SMARCA5	100	95.787	ENSMUSG00000031715	Smarca5	95	95.787	Mus_musculus
ENSPSIG00000004177	SMARCA5	100	95.988	MGP_PahariEiJ_G0022862	Smarca5	95	95.988	Mus_pahari
ENSPSIG00000004177	SMARCA5	100	96.289	ENSMLUG00000000468	SMARCA5	95	96.289	Myotis_lucifugus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSNGAG00000000441	Smarca5	95	95.988	Nannospalax_galili
ENSPSIG00000004177	SMARCA5	100	95.988	ENSNLEG00000005383	SMARCA5	95	95.988	Nomascus_leucogenys
ENSPSIG00000004177	SMARCA5	97	88.648	ENSMEUG00000001267	SMARCA5	100	88.648	Notamacropus_eugenii
ENSPSIG00000004177	SMARCA5	90	94.764	ENSOPRG00000014427	SMARCA5	86	94.764	Ochotona_princeps
ENSPSIG00000004177	SMARCA5	97	96.392	ENSOANG00000013921	SMARCA5	100	96.392	Ornithorhynchus_anatinus
ENSPSIG00000004177	SMARCA5	97	96.186	ENSOCUG00000013042	SMARCA5	100	96.186	Oryctolagus_cuniculus
ENSPSIG00000004177	SMARCA5	100	96.088	ENSOGAG00000009702	SMARCA5	95	96.088	Otolemur_garnettii
ENSPSIG00000004177	SMARCA5	99	95.984	ENSOARG00000010589	SMARCA5	94	95.984	Ovis_aries
ENSPSIG00000004177	SMARCA5	100	96.088	ENSPPAG00000028523	SMARCA5	99	96.076	Pan_paniscus
ENSPSIG00000004177	SMARCA5	100	92.678	ENSPPRG00000004925	SMARCA5	94	92.678	Panthera_pardus
ENSPSIG00000004177	SMARCA5	100	96.289	ENSPTIG00000020959	SMARCA5	96	96.289	Panthera_tigris_altaica
ENSPSIG00000004177	SMARCA5	100	95.988	ENSPTRG00000016472	SMARCA5	99	95.976	Pan_troglodytes
ENSPSIG00000004177	SMARCA5	100	95.988	ENSPANG00000001175	SMARCA5	95	95.988	Papio_anubis
ENSPSIG00000004177	SMARCA5	100	87.988	ENSPKIG00000015885	SMARCA5	100	89.691	Paramormyrops_kingsleyae
ENSPSIG00000004177	SMARCA5	98	88.730	ENSPKIG00000015699	SMARCA5	98	87.352	Paramormyrops_kingsleyae
ENSPSIG00000004177	SMARCA5	97	88.374	ENSPMGG00000012316	SMARCA5	100	88.374	Periophthalmus_magnuspinnatus
ENSPSIG00000004177	SMARCA5	100	95.888	ENSPEMG00000008060	Smarca5	98	95.888	Peromyscus_maniculatus_bairdii
ENSPSIG00000004177	SMARCA5	64	84.867	ENSPMAG00000008026	SMARCA5	99	84.867	Petromyzon_marinus
ENSPSIG00000004177	SMARCA5	99	68.976	ENSPMAG00000006011	SMARCA5	81	83.520	Petromyzon_marinus
ENSPSIG00000004177	SMARCA5	100	96.389	ENSPCIG00000003926	SMARCA5	95	96.389	Phascolarctos_cinereus
ENSPSIG00000004177	SMARCA5	100	95.988	ENSPPYG00000015091	SMARCA5	95	95.988	Pongo_abelii
ENSPSIG00000004177	SMARCA5	84	91.833	ENSPCAG00000014230	SMARCA5	83	91.833	Procavia_capensis
ENSPSIG00000004177	SMARCA5	100	93.180	ENSPCOG00000026744	SMARCA5	99	92.757	Propithecus_coquereli
ENSPSIG00000004177	SMARCA5	100	96.189	ENSPVAG00000006482	SMARCA5	95	96.189	Pteropus_vampyrus
ENSPSIG00000004177	SMARCA5	99	88.353	ENSPNAG00000027824	SMARCA5	98	88.090	Pygocentrus_nattereri
ENSPSIG00000004177	SMARCA5	99	95.984	ENSRNOG00000018149	Smarca5	100	95.984	Rattus_norvegicus
ENSPSIG00000004177	SMARCA5	100	95.892	ENSRBIG00000044644	SMARCA5	95	95.892	Rhinopithecus_bieti
ENSPSIG00000004177	SMARCA5	99	95.879	ENSRROG00000029591	SMARCA5	99	95.879	Rhinopithecus_roxellana
ENSPSIG00000004177	SMARCA5	100	95.988	ENSSBOG00000036257	SMARCA5	95	95.988	Saimiri_boliviensis_boliviensis
ENSPSIG00000004177	SMARCA5	99	96.573	ENSSHAG00000008464	SMARCA5	99	96.573	Sarcophilus_harrisii
ENSPSIG00000004177	SMARCA5	99	88.844	ENSSFOG00015013252	SMARCA5	97	88.844	Scleropages_formosus
ENSPSIG00000004177	SMARCA5	99	95.253	ENSSPUG00000007604	SMARCA5	97	97.959	Sphenodon_punctatus
ENSPSIG00000004177	SMARCA5	100	96.289	ENSSSCG00000009047	SMARCA5	95	96.289	Sus_scrofa
ENSPSIG00000004177	SMARCA5	100	95.687	ENSTGUG00000002408	SMARCA5	99	95.687	Taeniopygia_guttata
ENSPSIG00000004177	SMARCA5	98	96.315	ENSUAMG00000023495	SMARCA5	93	96.315	Ursus_americanus
ENSPSIG00000004177	SMARCA5	100	96.289	ENSUMAG00000015324	SMARCA5	97	96.289	Ursus_maritimus
ENSPSIG00000004177	SMARCA5	100	96.189	ENSVPAG00000008982	SMARCA5	95	96.189	Vicugna_pacos
ENSPSIG00000004177	SMARCA5	100	96.289	ENSVVUG00000017473	SMARCA5	95	96.289	Vulpes_vulpes
ENSPSIG00000004177	SMARCA5	94	91.640	ENSXETG00000017566	smarca5	95	91.640	Xenopus_tropicalis