EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000004189 (Gene tree)
Gene ID: 102461292
Gene Symbol: -
Alias: -
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 14829 bases
Position: chrJH224661.1:108437-123265
Accession: 102461292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004457	RRM_1	PF00076.22	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004482	-	5010	XM_006138749	ENSPSIP00000004457	265 (aa)	XP_006138812	K7F8U7

Gene Model

Click here to download ENSPSIG00000004189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000004189	-	78	50.000	ENSPSIG00000006864	TRNAU1AP	70	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004189	-	78	40.291	ENSAPOG00000010086	trnau1apb	67	43.750	Acanthochromis_polyacanthus
ENSPSIG00000004189	-	78	44.196	ENSACIG00000001863	trnau1apb	69	44.196	Amphilophus_citrinellus
ENSPSIG00000004189	-	78	41.767	ENSAOCG00000011891	trnau1apb	71	41.897	Amphiprion_ocellaris
ENSPSIG00000004189	-	78	39.437	ENSAPEG00000008029	trnau1apb	71	42.324	Amphiprion_percula
ENSPSIG00000004189	-	78	40.400	ENSATEG00000002196	trnau1apb	71	41.532	Anabas_testudineus
ENSPSIG00000004189	-	78	43.290	ENSACLG00000003016	trnau1apb	70	43.290	Astatotilapia_calliptera
ENSPSIG00000004189	-	77	45.413	ENSAMXG00000001805	trnau1apb	68	47.442	Astyanax_mexicanus
ENSPSIG00000004189	-	78	38.554	ENSCSEG00000018215	trnau1apb	73	41.036	Cynoglossus_semilaevis
ENSPSIG00000004189	-	78	35.102	ENSCVAG00000017866	trnau1apb	75	39.592	Cyprinodon_variegatus
ENSPSIG00000004189	-	77	46.729	ENSDARG00000056475	trnau1apb	68	48.131	Danio_rerio
ENSPSIG00000004189	-	78	44.248	ENSELUG00000016683	trnau1apb	69	47.321	Esox_lucius
ENSPSIG00000004189	-	78	38.956	ENSFHEG00000001267	trnau1apb	75	39.676	Fundulus_heteroclitus
ENSPSIG00000004189	-	76	38.559	ENSGMOG00000001160	trnau1apb	70	39.407	Gadus_morhua
ENSPSIG00000004189	-	78	40.084	ENSGACG00000014944	trnau1apb	70	43.220	Gasterosteus_aculeatus
ENSPSIG00000004189	-	100	90.189	ENSGAGG00000022384	-	100	90.189	Gopherus_agassizii
ENSPSIG00000004189	-	78	44.444	ENSHBUG00000018944	trnau1apb	71	43.033	Haplochromis_burtoni
ENSPSIG00000004189	-	77	45.872	ENSIPUG00000008843	tsp1l	69	47.706	Ictalurus_punctatus
ENSPSIG00000004189	-	78	41.423	ENSLBEG00000020480	trnau1apb	71	43.515	Labrus_bergylta
ENSPSIG00000004189	-	82	51.754	ENSLOCG00000013175	trnau1apb	71	52.632	Lepisosteus_oculatus
ENSPSIG00000004189	-	78	40.741	ENSMAMG00000012192	trnau1apb	70	43.154	Mastacembelus_armatus
ENSPSIG00000004189	-	78	40.650	ENSMZEG00005014852	trnau1apb	71	43.033	Maylandia_zebra
ENSPSIG00000004189	-	78	81.818	ENSMGAG00000003234	-	99	81.818	Meleagris_gallopavo
ENSPSIG00000004189	-	79	37.247	ENSMMOG00000021521	trnau1apb	71	38.462	Mola_mola
ENSPSIG00000004189	-	78	39.906	ENSMALG00000003772	trnau1apb	68	41.121	Monopterus_albus
ENSPSIG00000004189	-	75	42.152	ENSNBRG00000000751	trnau1apb	69	42.152	Neolamprologus_brichardi
ENSPSIG00000004189	-	78	43.636	ENSONIG00000016639	trnau1apb	68	43.636	Oreochromis_niloticus
ENSPSIG00000004189	-	78	39.024	ENSORLG00020004464	trnau1apb	75	40.650	Oryzias_latipes_hni
ENSPSIG00000004189	-	78	39.024	ENSORLG00015021098	trnau1apb	71	40.650	Oryzias_latipes_hsok
ENSPSIG00000004189	-	78	47.143	ENSPKIG00000007995	trnau1apb	70	47.899	Paramormyrops_kingsleyae
ENSPSIG00000004189	-	78	39.423	ENSPMGG00000018509	trnau1apb	67	39.423	Periophthalmus_magnuspinnatus
ENSPSIG00000004189	-	78	42.986	ENSPFOG00000003938	trnau1apb	69	43.243	Poecilia_formosa
ENSPSIG00000004189	-	78	40.161	ENSPLAG00000015480	trnau1apb	71	40.891	Poecilia_latipinna
ENSPSIG00000004189	-	78	40.161	ENSPMEG00000012743	trnau1apb	71	40.891	Poecilia_mexicana
ENSPSIG00000004189	-	78	39.676	ENSPREG00000015035	trnau1apb	71	40.081	Poecilia_reticulata
ENSPSIG00000004189	-	78	43.290	ENSPNYG00000012127	trnau1apb	70	43.290	Pundamilia_nyererei
ENSPSIG00000004189	-	77	47.489	ENSPNAG00000019138	trnau1apb	68	48.624	Pygocentrus_nattereri
ENSPSIG00000004189	-	78	44.915	ENSSFOG00015014158	trnau1apb	71	48.511	Scleropages_formosus
ENSPSIG00000004189	-	77	38.017	ENSSMAG00000001745	trnau1apb	71	40.417	Scophthalmus_maximus
ENSPSIG00000004189	-	78	38.710	ENSSDUG00000011109	trnau1apb	71	41.224	Seriola_dumerili
ENSPSIG00000004189	-	78	38.462	ENSSLDG00000012947	trnau1apb	71	41.870	Seriola_lalandi_dorsalis
ENSPSIG00000004189	-	99	57.508	ENSSPUG00000016701	-	99	60.518	Sphenodon_punctatus
ENSPSIG00000004189	-	78	41.365	ENSSPAG00000006917	trnau1apb	71	41.224	Stegastes_partitus
ENSPSIG00000004189	-	78	39.683	ENSTRUG00000008608	trnau1apb	71	40.486	Takifugu_rubripes
ENSPSIG00000004189	-	78	40.865	ENSTNIG00000000916	trnau1apb	68	40.865	Tetraodon_nigroviridis
ENSPSIG00000004189	-	78	39.091	ENSXCOG00000007974	trnau1apb	67	40.566	Xiphophorus_couchianus
ENSPSIG00000004189	-	78	40.486	ENSXMAG00000029918	trnau1apb	71	40.891	Xiphophorus_maculatus