EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000004196 (Gene tree)
Gene ID: 102459715
Gene Symbol: LRRC47
Alias: -
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 11146 bases
Position: chrJH209271.1:3270773-3281918
Accession: 102459715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004472	B3_4	PF03483.17	5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004497	LRRC47-201	1137	XM_006124698	ENSPSIP00000004472	378 (aa)	XP_006124760	K7F8W2

Gene Model

Click here to download ENSPSIG00000004196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004196	LRRC47	100	67.454	ENSG00000130764	LRRC47	65	67.454	Homo_sapiens
ENSPSIG00000004196	LRRC47	99	63.395	ENSAPOG00000019553	lrrc47	66	63.395	Acanthochromis_polyacanthus
ENSPSIG00000004196	LRRC47	100	66.842	ENSAMEG00000009152	LRRC47	83	67.368	Ailuropoda_melanoleuca
ENSPSIG00000004196	LRRC47	100	75.926	ENSAPLG00000003167	LRRC47	98	77.249	Anas_platyrhynchos
ENSPSIG00000004196	LRRC47	100	73.016	ENSACAG00000008267	LRRC47	99	73.016	Anolis_carolinensis
ENSPSIG00000004196	LRRC47	100	65.879	ENSANAG00000025576	LRRC47	65	65.879	Aotus_nancymaae
ENSPSIG00000004196	LRRC47	100	64.211	ENSBTAG00000004738	LRRC47	65	65.263	Bos_taurus
ENSPSIG00000004196	LRRC47	100	66.316	ENSCAFG00000019492	LRRC47	64	66.842	Canis_familiaris
ENSPSIG00000004196	LRRC47	100	66.316	ENSCAFG00020009667	LRRC47	66	66.842	Canis_lupus_dingo
ENSPSIG00000004196	LRRC47	100	65.183	ENSCHIG00000022607	LRRC47	65	66.230	Capra_hircus
ENSPSIG00000004196	LRRC47	100	68.325	ENSTSYG00000009326	LRRC47	65	68.325	Carlito_syrichta
ENSPSIG00000004196	LRRC47	99	64.550	ENSCAPG00000016517	LRRC47	99	65.079	Cavia_aperea
ENSPSIG00000004196	LRRC47	100	64.042	ENSCPOG00000014931	LRRC47	62	64.567	Cavia_porcellus
ENSPSIG00000004196	LRRC47	100	66.667	ENSCCAG00000024895	LRRC47	65	66.667	Cebus_capucinus
ENSPSIG00000004196	LRRC47	100	68.241	ENSCATG00000029337	LRRC47	65	68.241	Cercocebus_atys
ENSPSIG00000004196	LRRC47	100	65.608	ENSCLAG00000006093	LRRC47	65	66.402	Chinchilla_lanigera
ENSPSIG00000004196	LRRC47	100	68.241	ENSCSAG00000000727	LRRC47	65	68.241	Chlorocebus_sabaeus
ENSPSIG00000004196	LRRC47	100	93.386	ENSCPBG00000019404	LRRC47	64	93.386	Chrysemys_picta_bellii
ENSPSIG00000004196	LRRC47	100	67.188	ENSCANG00000030701	LRRC47	80	67.188	Colobus_angolensis_palliatus
ENSPSIG00000004196	LRRC47	100	63.061	ENSCGRG00001015159	Lrrc47	59	64.116	Cricetulus_griseus_chok1gshd
ENSPSIG00000004196	LRRC47	100	63.780	ENSCGRG00000017336	Lrrc47	99	64.362	Cricetulus_griseus_crigri
ENSPSIG00000004196	LRRC47	99	60.743	ENSCSEG00000006217	lrrc47	64	61.538	Cynoglossus_semilaevis
ENSPSIG00000004196	LRRC47	99	66.142	ENSDORG00000016594	Lrrc47	100	67.454	Dipodomys_ordii
ENSPSIG00000004196	LRRC47	100	68.241	ENSEASG00005021788	LRRC47	65	68.504	Equus_asinus_asinus
ENSPSIG00000004196	LRRC47	100	68.241	ENSECAG00000022472	LRRC47	59	68.241	Equus_caballus
ENSPSIG00000004196	LRRC47	97	61.702	ENSELUG00000017544	lrrc47	65	62.078	Esox_lucius
ENSPSIG00000004196	LRRC47	92	63.533	ENSFCAG00000011632	LRRC47	61	64.103	Felis_catus
ENSPSIG00000004196	LRRC47	100	75.132	ENSFALG00000009631	LRRC47	85	75.132	Ficedula_albicollis
ENSPSIG00000004196	LRRC47	99	60.372	ENSGMOG00000015674	lrrc47	66	60.638	Gadus_morhua
ENSPSIG00000004196	LRRC47	100	71.958	ENSGALG00000050995	LRRC47	65	71.693	Gallus_gallus
ENSPSIG00000004196	LRRC47	97	61.580	ENSGACG00000005550	lrrc47	64	61.957	Gasterosteus_aculeatus
ENSPSIG00000004196	LRRC47	100	92.593	ENSGAGG00000022584	LRRC47	63	92.593	Gopherus_agassizii
ENSPSIG00000004196	LRRC47	100	67.979	ENSGGOG00000015571	LRRC47	65	67.979	Gorilla_gorilla
ENSPSIG00000004196	LRRC47	100	64.474	ENSHGLG00000018278	LRRC47	62	64.474	Heterocephalus_glaber_female
ENSPSIG00000004196	LRRC47	100	64.474	ENSHGLG00100008507	LRRC47	94	64.474	Heterocephalus_glaber_male
ENSPSIG00000004196	LRRC47	99	61.905	ENSHCOG00000006348	lrrc47	64	61.905	Hippocampus_comes
ENSPSIG00000004196	LRRC47	100	64.829	ENSSTOG00000027559	LRRC47	65	66.753	Ictidomys_tridecemlineatus
ENSPSIG00000004196	LRRC47	100	69.029	ENSJJAG00000017474	Lrrc47	63	69.291	Jaculus_jaculus
ENSPSIG00000004196	LRRC47	99	63.395	ENSKMAG00000003414	lrrc47	66	63.395	Kryptolebias_marmoratus
ENSPSIG00000004196	LRRC47	100	70.526	ENSLAFG00000011657	LRRC47	65	70.526	Loxodonta_africana
ENSPSIG00000004196	LRRC47	100	68.241	ENSMNEG00000042488	LRRC47	65	68.241	Macaca_nemestrina
ENSPSIG00000004196	LRRC47	100	66.667	ENSMLEG00000043735	LRRC47	77	66.667	Mandrillus_leucophaeus
ENSPSIG00000004196	LRRC47	58	83.258	ENSMGAG00000001670	LRRC47	99	83.258	Meleagris_gallopavo
ENSPSIG00000004196	LRRC47	100	65.354	ENSMAUG00000021337	Lrrc47	64	66.404	Mesocricetus_auratus
ENSPSIG00000004196	LRRC47	100	66.142	ENSMICG00000026816	LRRC47	65	66.404	Microcebus_murinus
ENSPSIG00000004196	LRRC47	100	63.780	ENSMOCG00000021279	Lrrc47	65	65.617	Microtus_ochrogaster
ENSPSIG00000004196	LRRC47	99	62.599	ENSMMOG00000017007	lrrc47	66	62.599	Mola_mola
ENSPSIG00000004196	LRRC47	100	72.296	ENSMODG00000006554	LRRC47	63	72.559	Monodelphis_domestica
ENSPSIG00000004196	LRRC47	53	32.673	MGP_CAROLIEiJ_G0014310	Farsb	78	32.673	Mus_caroli
ENSPSIG00000004196	LRRC47	100	65.699	MGP_CAROLIEiJ_G0026864	Lrrc47	65	65.699	Mus_caroli
ENSPSIG00000004196	LRRC47	53	32.673	ENSMUSG00000026245	Farsb	78	32.673	Mus_musculus
ENSPSIG00000004196	LRRC47	100	65.699	ENSMUSG00000029028	Lrrc47	65	65.699	Mus_musculus
ENSPSIG00000004196	LRRC47	53	32.673	MGP_PahariEiJ_G0027548	Farsb	78	32.673	Mus_pahari
ENSPSIG00000004196	LRRC47	100	62.533	MGP_PahariEiJ_G0029212	Lrrc47	65	65.172	Mus_pahari
ENSPSIG00000004196	LRRC47	100	65.354	MGP_SPRETEiJ_G0027857	Lrrc47	65	65.354	Mus_spretus
ENSPSIG00000004196	LRRC47	53	32.673	MGP_SPRETEiJ_G0015116	Farsb	78	32.673	Mus_spretus
ENSPSIG00000004196	LRRC47	99	65.435	ENSMPUG00000007321	LRRC47	75	65.963	Mustela_putorius_furo
ENSPSIG00000004196	LRRC47	100	63.061	ENSNGAG00000022153	Lrrc47	65	65.435	Nannospalax_galili
ENSPSIG00000004196	LRRC47	100	67.717	ENSNLEG00000008131	LRRC47	68	67.717	Nomascus_leucogenys
ENSPSIG00000004196	LRRC47	100	65.789	ENSODEG00000010882	LRRC47	72	66.316	Octodon_degus
ENSPSIG00000004196	LRRC47	95	62.117	ENSORLG00000002532	lrrc47	65	62.117	Oryzias_latipes
ENSPSIG00000004196	LRRC47	99	62.069	ENSORLG00020019601	lrrc47	66	62.069	Oryzias_latipes_hni
ENSPSIG00000004196	LRRC47	99	61.804	ENSORLG00015014040	lrrc47	66	61.804	Oryzias_latipes_hsok
ENSPSIG00000004196	LRRC47	99	62.334	ENSOMEG00000008989	lrrc47	66	62.334	Oryzias_melastigma
ENSPSIG00000004196	LRRC47	100	65.000	ENSOGAG00000001553	LRRC47	65	65.000	Otolemur_garnettii
ENSPSIG00000004196	LRRC47	99	64.829	ENSOARG00000015290	LRRC47	65	65.879	Ovis_aries
ENSPSIG00000004196	LRRC47	100	67.717	ENSPPAG00000036370	-	82	67.717	Pan_paniscus
ENSPSIG00000004196	LRRC47	100	63.780	ENSPPRG00000005261	LRRC47	65	64.304	Panthera_pardus
ENSPSIG00000004196	LRRC47	100	67.717	ENSPTRG00000000068	LRRC47	65	67.717	Pan_troglodytes
ENSPSIG00000004196	LRRC47	100	67.979	ENSPANG00000012437	LRRC47	65	67.979	Papio_anubis
ENSPSIG00000004196	LRRC47	99	65.426	ENSPEMG00000021068	Lrrc47	99	66.755	Peromyscus_maniculatus_bairdii
ENSPSIG00000004196	LRRC47	100	77.309	ENSPCIG00000003638	LRRC47	65	77.573	Phascolarctos_cinereus
ENSPSIG00000004196	LRRC47	87	64.832	ENSPFOG00000000992	lrrc47	58	64.939	Poecilia_formosa
ENSPSIG00000004196	LRRC47	99	63.395	ENSPLAG00000008077	lrrc47	66	63.660	Poecilia_latipinna
ENSPSIG00000004196	LRRC47	99	63.395	ENSPMEG00000007367	lrrc47	66	63.395	Poecilia_mexicana
ENSPSIG00000004196	LRRC47	100	67.717	ENSPPYG00000001960	LRRC47	65	67.717	Pongo_abelii
ENSPSIG00000004196	LRRC47	100	66.667	ENSPCOG00000019161	LRRC47	65	66.929	Propithecus_coquereli
ENSPSIG00000004196	LRRC47	100	64.021	ENSPVAG00000009839	LRRC47	65	64.021	Pteropus_vampyrus
ENSPSIG00000004196	LRRC47	100	65.274	ENSPNAG00000017982	lrrc47	66	64.474	Pygocentrus_nattereri
ENSPSIG00000004196	LRRC47	100	63.517	ENSRNOG00000024796	Lrrc47	65	66.404	Rattus_norvegicus
ENSPSIG00000004196	LRRC47	100	68.504	ENSRBIG00000019437	LRRC47	65	68.504	Rhinopithecus_bieti
ENSPSIG00000004196	LRRC47	100	68.504	ENSRROG00000043182	LRRC47	65	68.504	Rhinopithecus_roxellana
ENSPSIG00000004196	LRRC47	100	67.016	ENSSBOG00000026334	LRRC47	78	66.667	Saimiri_boliviensis_boliviensis
ENSPSIG00000004196	LRRC47	99	76.720	ENSSHAG00000007360	LRRC47	64	76.984	Sarcophilus_harrisii
ENSPSIG00000004196	LRRC47	99	63.395	ENSSMAG00000009344	lrrc47	66	63.395	Scophthalmus_maximus
ENSPSIG00000004196	LRRC47	97	62.634	ENSSDUG00000014618	lrrc47	66	62.334	Seriola_dumerili
ENSPSIG00000004196	LRRC47	97	63.710	ENSSLDG00000018908	lrrc47	66	62.599	Seriola_lalandi_dorsalis
ENSPSIG00000004196	LRRC47	100	82.011	ENSSPUG00000010277	LRRC47	65	82.011	Sphenodon_punctatus
ENSPSIG00000004196	LRRC47	99	61.358	ENSSPAG00000005188	lrrc47	66	63.130	Stegastes_partitus
ENSPSIG00000004196	LRRC47	100	68.158	ENSSSCG00000039516	LRRC47	65	67.895	Sus_scrofa
ENSPSIG00000004196	LRRC47	100	73.810	ENSTGUG00000002737	LRRC47	92	72.222	Taeniopygia_guttata
ENSPSIG00000004196	LRRC47	99	62.169	ENSTRUG00000017696	lrrc47	66	61.804	Takifugu_rubripes
ENSPSIG00000004196	LRRC47	99	61.376	ENSTNIG00000010923	lrrc47	66	60.212	Tetraodon_nigroviridis
ENSPSIG00000004196	LRRC47	100	66.579	ENSTTRG00000011751	LRRC47	65	66.579	Tursiops_truncatus
ENSPSIG00000004196	LRRC47	100	67.368	ENSUAMG00000012080	LRRC47	72	67.895	Ursus_americanus
ENSPSIG00000004196	LRRC47	99	68.074	ENSUMAG00000010781	LRRC47	80	68.338	Ursus_maritimus
ENSPSIG00000004196	LRRC47	99	66.227	ENSVVUG00000027118	LRRC47	65	66.755	Vulpes_vulpes
ENSPSIG00000004196	LRRC47	100	70.341	ENSXETG00000006029	lrrc47	66	70.604	Xenopus_tropicalis
ENSPSIG00000004196	LRRC47	99	62.865	ENSXCOG00000002813	lrrc47	65	62.599	Xiphophorus_couchianus
ENSPSIG00000004196	LRRC47	99	62.069	ENSXMAG00000019386	lrrc47	66	62.865	Xiphophorus_maculatus