EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000004262 (Gene tree)
Gene ID: 102446129
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 5727 bases
Position: chrJH209440.1:11869-17595
Accession: 102446129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004541	zf-C2H2	PF00096.26	5.9e-26	1	4
ENSPSIP00000004541	zf-C2H2	PF00096.26	5.9e-26	2	4
ENSPSIP00000004541	zf-C2H2	PF00096.26	5.9e-26	3	4
ENSPSIP00000004541	zf-C2H2	PF00096.26	5.9e-26	4	4
ENSPSIP00000004541	zf-met	PF12874.7	4.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004566	SNAI3-201	1952	XM_006125801	ENSPSIP00000004541	253 (aa)	XP_006125863	K7F931

Gene Model

Click here to download ENSPSIG00000004262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000004262	SNAI3	57	33.099	ENSPSIG00000004303	ZNF319	79	33.108
ENSPSIG00000004262	SNAI3	56	37.190	ENSPSIG00000012112	GFI1B	51	37.190
ENSPSIG00000004262	SNAI3	78	37.313	ENSPSIG00000015465	-	84	37.313
ENSPSIG00000004262	SNAI3	58	41.584	ENSPSIG00000008588	-	100	39.860
ENSPSIG00000004262	SNAI3	60	39.073	ENSPSIG00000012650	-	68	39.073
ENSPSIG00000004262	SNAI3	58	40.000	ENSPSIG00000009650	-	66	40.000
ENSPSIG00000004262	SNAI3	68	68.786	ENSPSIG00000003607	SNAI1	67	68.786
ENSPSIG00000004262	SNAI3	63	38.983	ENSPSIG00000001026	-	87	38.983
ENSPSIG00000004262	SNAI3	56	37.931	ENSPSIG00000006790	-	87	37.931
ENSPSIG00000004262	SNAI3	87	41.772	ENSPSIG00000003152	-	93	41.772
ENSPSIG00000004262	SNAI3	63	46.591	ENSPSIG00000012865	-	69	46.591
ENSPSIG00000004262	SNAI3	57	45.783	ENSPSIG00000009603	-	98	45.783
ENSPSIG00000004262	SNAI3	77	41.045	ENSPSIG00000015459	-	79	41.045
ENSPSIG00000004262	SNAI3	57	43.056	ENSPSIG00000000672	-	85	43.056
ENSPSIG00000004262	SNAI3	77	42.963	ENSPSIG00000016380	-	79	42.963
ENSPSIG00000004262	SNAI3	75	41.045	ENSPSIG00000009893	-	78	41.045
ENSPSIG00000004262	SNAI3	64	40.146	ENSPSIG00000006586	-	99	40.146
ENSPSIG00000004262	SNAI3	85	40.230	ENSPSIG00000000075	-	94	40.230
ENSPSIG00000004262	SNAI3	85	39.552	ENSPSIG00000005603	-	82	39.552
ENSPSIG00000004262	SNAI3	87	44.737	ENSPSIG00000010328	-	80	44.737
ENSPSIG00000004262	SNAI3	53	38.835	ENSPSIG00000004647	-	50	38.835
ENSPSIG00000004262	SNAI3	57	42.105	ENSPSIG00000004502	-	52	42.105
ENSPSIG00000004262	SNAI3	56	41.549	ENSPSIG00000005672	-	63	41.549
ENSPSIG00000004262	SNAI3	56	33.088	ENSPSIG00000004682	ZNF652	58	33.088
ENSPSIG00000004262	SNAI3	64	41.558	ENSPSIG00000002569	-	92	41.558
ENSPSIG00000004262	SNAI3	53	41.429	ENSPSIG00000000522	-	78	41.429
ENSPSIG00000004262	SNAI3	57	42.537	ENSPSIG00000010405	-	99	42.537
ENSPSIG00000004262	SNAI3	57	36.111	ENSPSIG00000001739	-	97	36.111
ENSPSIG00000004262	SNAI3	57	45.333	ENSPSIG00000013021	-	73	45.333
ENSPSIG00000004262	SNAI3	62	43.396	ENSPSIG00000013505	PRDM5	58	43.396
ENSPSIG00000004262	SNAI3	56	80.986	ENSPSIG00000016395	SNAI2	86	57.872
ENSPSIG00000004262	SNAI3	57	42.017	ENSPSIG00000000333	-	73	42.017
ENSPSIG00000004262	SNAI3	77	41.739	ENSPSIG00000015216	-	96	41.739
ENSPSIG00000004262	SNAI3	58	36.893	ENSPSIG00000005522	ZNF646	98	36.893
ENSPSIG00000004262	SNAI3	53	38.519	ENSPSIG00000004614	-	86	38.519
ENSPSIG00000004262	SNAI3	61	41.071	ENSPSIG00000010248	-	64	40.299
ENSPSIG00000004262	SNAI3	57	36.792	ENSPSIG00000000760	-	77	36.792
ENSPSIG00000004262	SNAI3	65	37.190	ENSPSIG00000009270	-	67	37.190
ENSPSIG00000004262	SNAI3	51	30.216	ENSPSIG00000011722	GTF3A	61	30.216
ENSPSIG00000004262	SNAI3	64	40.000	ENSPSIG00000005128	-	99	43.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004262	SNAI3	56	80.986	ENSG00000019549	SNAI2	73	62.626	Homo_sapiens
ENSPSIG00000004262	SNAI3	91	64.069	ENSG00000185669	SNAI3	77	64.069	Homo_sapiens
ENSPSIG00000004262	SNAI3	56	80.986	ENSAMEG00000009606	SNAI2	86	57.447	Ailuropoda_melanoleuca
ENSPSIG00000004262	SNAI3	91	62.609	ENSANAG00000032748	SNAI3	77	62.609	Aotus_nancymaae
ENSPSIG00000004262	SNAI3	56	80.986	ENSANAG00000021163	SNAI2	73	62.626	Aotus_nancymaae
ENSPSIG00000004262	SNAI3	90	58.798	ENSBTAG00000017528	SNAI3	76	58.798	Bos_taurus
ENSPSIG00000004262	SNAI3	56	81.690	ENSBTAG00000013227	SNAI2	53	81.690	Bos_taurus
ENSPSIG00000004262	SNAI3	56	80.986	ENSCJAG00000013499	SNAI2	73	62.626	Callithrix_jacchus
ENSPSIG00000004262	SNAI3	91	64.629	ENSCAFG00000029458	SNAI3	77	64.629	Canis_familiaris
ENSPSIG00000004262	SNAI3	56	80.986	ENSCAFG00000006638	SNAI2	53	80.986	Canis_familiaris
ENSPSIG00000004262	SNAI3	56	80.986	ENSCAFG00020015384	SNAI2	53	80.986	Canis_lupus_dingo
ENSPSIG00000004262	SNAI3	91	65.066	ENSCAFG00020004719	SNAI3	77	65.066	Canis_lupus_dingo
ENSPSIG00000004262	SNAI3	90	58.369	ENSCHIG00000018087	SNAI3	76	58.369	Capra_hircus
ENSPSIG00000004262	SNAI3	56	81.690	ENSCHIG00000024410	SNAI2	53	81.690	Capra_hircus
ENSPSIG00000004262	SNAI3	56	80.986	ENSTSYG00000030892	SNAI2	53	80.986	Carlito_syrichta
ENSPSIG00000004262	SNAI3	91	61.304	ENSTSYG00000025594	SNAI3	77	61.304	Carlito_syrichta
ENSPSIG00000004262	SNAI3	56	79.577	ENSCAPG00000013078	SNAI2	64	79.577	Cavia_aperea
ENSPSIG00000004262	SNAI3	56	80.986	ENSCCAG00000024100	SNAI2	73	62.626	Cebus_capucinus
ENSPSIG00000004262	SNAI3	91	63.043	ENSCATG00000031714	SNAI3	77	63.043	Cercocebus_atys
ENSPSIG00000004262	SNAI3	56	80.986	ENSCATG00000028656	SNAI2	73	62.626	Cercocebus_atys
ENSPSIG00000004262	SNAI3	56	80.986	ENSCLAG00000011797	SNAI2	86	57.447	Chinchilla_lanigera
ENSPSIG00000004262	SNAI3	91	63.043	ENSCSAG00000003047	SNAI3	77	63.043	Chlorocebus_sabaeus
ENSPSIG00000004262	SNAI3	56	80.986	ENSCSAG00000014787	SNAI2	73	62.626	Chlorocebus_sabaeus
ENSPSIG00000004262	SNAI3	56	80.986	ENSCPBG00000020255	SNAI2	86	57.872	Chrysemys_picta_bellii
ENSPSIG00000004262	SNAI3	91	84.279	ENSCPBG00000023474	SNAI3	81	84.279	Chrysemys_picta_bellii
ENSPSIG00000004262	SNAI3	53	66.418	ENSCSAVG00000009819	-	69	66.418	Ciona_savignyi
ENSPSIG00000004262	SNAI3	56	80.986	ENSCANG00000029656	SNAI2	73	62.626	Colobus_angolensis_palliatus
ENSPSIG00000004262	SNAI3	91	64.348	ENSCANG00000031124	SNAI3	69	64.348	Colobus_angolensis_palliatus
ENSPSIG00000004262	SNAI3	91	59.565	ENSCGRG00001011389	Snai3	76	61.304	Cricetulus_griseus_chok1gshd
ENSPSIG00000004262	SNAI3	56	80.986	ENSCGRG00001013674	Snai2	53	80.986	Cricetulus_griseus_chok1gshd
ENSPSIG00000004262	SNAI3	91	59.565	ENSCGRG00000014932	Snai3	76	61.304	Cricetulus_griseus_crigri
ENSPSIG00000004262	SNAI3	56	80.986	ENSCGRG00000012119	Snai2	53	80.986	Cricetulus_griseus_crigri
ENSPSIG00000004262	SNAI3	66	42.703	ENSDNOG00000035204	-	57	47.826	Dasypus_novemcinctus
ENSPSIG00000004262	SNAI3	56	80.986	ENSDORG00000029620	Snai2	76	62.189	Dipodomys_ordii
ENSPSIG00000004262	SNAI3	51	74.815	ENSETEG00000016371	-	96	74.815	Echinops_telfairi
ENSPSIG00000004262	SNAI3	91	63.755	ENSEASG00005000614	SNAI3	73	63.755	Equus_asinus_asinus
ENSPSIG00000004262	SNAI3	91	63.755	ENSECAG00000012131	SNAI3	77	63.755	Equus_caballus
ENSPSIG00000004262	SNAI3	91	55.022	ENSEEUG00000000841	SNAI3	75	54.585	Erinaceus_europaeus
ENSPSIG00000004262	SNAI3	65	70.482	ENSELUG00000021795	SNAI2	51	70.482	Esox_lucius
ENSPSIG00000004262	SNAI3	91	58.723	ENSELUG00000018742	-	82	58.723	Esox_lucius
ENSPSIG00000004262	SNAI3	90	57.895	ENSFCAG00000043885	SNAI3	74	57.895	Felis_catus
ENSPSIG00000004262	SNAI3	55	78.417	ENSFALG00000012974	-	74	68.639	Ficedula_albicollis
ENSPSIG00000004262	SNAI3	56	80.986	ENSFDAG00000016958	SNAI2	86	57.447	Fukomys_damarensis
ENSPSIG00000004262	SNAI3	56	80.986	ENSGAGG00000000426	SNAI2	86	57.872	Gopherus_agassizii
ENSPSIG00000004262	SNAI3	91	85.153	ENSGAGG00000023571	SNAI3	81	85.153	Gopherus_agassizii
ENSPSIG00000004262	SNAI3	56	80.986	ENSGGOG00000000959	SNAI2	73	62.626	Gorilla_gorilla
ENSPSIG00000004262	SNAI3	91	63.043	ENSGGOG00000012559	SNAI3	77	63.043	Gorilla_gorilla
ENSPSIG00000004262	SNAI3	56	79.021	ENSHCOG00000019435	SNAI2	57	79.021	Hippocampus_comes
ENSPSIG00000004262	SNAI3	78	58.852	ENSIPUG00000000131	snai2	77	59.330	Ictalurus_punctatus
ENSPSIG00000004262	SNAI3	56	80.986	ENSSTOG00000028743	SNAI2	86	57.447	Ictidomys_tridecemlineatus
ENSPSIG00000004262	SNAI3	82	63.285	ENSJJAG00000019934	Snai3	70	63.285	Jaculus_jaculus
ENSPSIG00000004262	SNAI3	56	80.282	ENSLOCG00000005992	SNAI2	62	71.257	Lepisosteus_oculatus
ENSPSIG00000004262	SNAI3	57	84.615	ENSLOCG00000004887	SNAI3	88	84.615	Lepisosteus_oculatus
ENSPSIG00000004262	SNAI3	91	65.939	ENSLAFG00000005117	SNAI3	77	65.939	Loxodonta_africana
ENSPSIG00000004262	SNAI3	56	80.986	ENSLAFG00000009299	SNAI2	86	57.447	Loxodonta_africana
ENSPSIG00000004262	SNAI3	91	63.913	ENSMFAG00000032064	SNAI3	77	63.913	Macaca_fascicularis
ENSPSIG00000004262	SNAI3	56	80.986	ENSMFAG00000046061	SNAI2	73	62.626	Macaca_fascicularis
ENSPSIG00000004262	SNAI3	91	63.913	ENSMMUG00000008716	SNAI3	77	63.913	Macaca_mulatta
ENSPSIG00000004262	SNAI3	56	80.986	ENSMMUG00000016195	SNAI2	73	62.626	Macaca_mulatta
ENSPSIG00000004262	SNAI3	91	63.913	ENSMNEG00000045515	SNAI3	79	63.913	Macaca_nemestrina
ENSPSIG00000004262	SNAI3	56	80.986	ENSMNEG00000034216	SNAI2	73	62.626	Macaca_nemestrina
ENSPSIG00000004262	SNAI3	56	80.986	ENSMLEG00000034407	SNAI2	73	62.626	Mandrillus_leucophaeus
ENSPSIG00000004262	SNAI3	91	63.478	ENSMLEG00000033191	SNAI3	77	63.478	Mandrillus_leucophaeus
ENSPSIG00000004262	SNAI3	91	61.739	ENSMAUG00000001685	Snai3	78	61.739	Mesocricetus_auratus
ENSPSIG00000004262	SNAI3	62	73.125	ENSMAUG00000008119	Snai2	66	67.797	Mesocricetus_auratus
ENSPSIG00000004262	SNAI3	56	80.986	ENSMOCG00000006622	Snai2	53	80.986	Microtus_ochrogaster
ENSPSIG00000004262	SNAI3	91	60.435	ENSMOCG00000003536	Snai3	76	60.435	Microtus_ochrogaster
ENSPSIG00000004262	SNAI3	92	57.872	ENSMODG00000010173	SNAI2	86	57.872	Monodelphis_domestica
ENSPSIG00000004262	SNAI3	91	56.957	MGP_CAROLIEiJ_G0031662	Snai3	76	56.957	Mus_caroli
ENSPSIG00000004262	SNAI3	56	80.986	MGP_CAROLIEiJ_G0020483	Snai2	73	63.131	Mus_caroli
ENSPSIG00000004262	SNAI3	91	58.261	ENSMUSG00000006587	Snai3	76	58.261	Mus_musculus
ENSPSIG00000004262	SNAI3	56	80.986	ENSMUSG00000022676	Snai2	86	58.120	Mus_musculus
ENSPSIG00000004262	SNAI3	91	59.307	MGP_PahariEiJ_G0023260	Snai3	76	59.307	Mus_pahari
ENSPSIG00000004262	SNAI3	56	80.986	MGP_PahariEiJ_G0016188	Snai2	73	63.131	Mus_pahari
ENSPSIG00000004262	SNAI3	56	80.986	MGP_SPRETEiJ_G0021379	Snai2	86	58.120	Mus_spretus
ENSPSIG00000004262	SNAI3	91	58.261	MGP_SPRETEiJ_G0032780	Snai3	76	58.261	Mus_spretus
ENSPSIG00000004262	SNAI3	56	80.986	ENSMPUG00000010793	SNAI2	86	57.447	Mustela_putorius_furo
ENSPSIG00000004262	SNAI3	91	59.825	ENSMPUG00000008104	SNAI3	77	59.825	Mustela_putorius_furo
ENSPSIG00000004262	SNAI3	56	80.986	ENSMLUG00000001086	SNAI2	70	64.921	Myotis_lucifugus
ENSPSIG00000004262	SNAI3	89	61.135	ENSNGAG00000023039	Snai3	77	61.135	Nannospalax_galili
ENSPSIG00000004262	SNAI3	91	64.502	ENSNLEG00000000595	SNAI3	77	64.502	Nomascus_leucogenys
ENSPSIG00000004262	SNAI3	56	80.986	ENSNLEG00000013421	SNAI2	73	62.626	Nomascus_leucogenys
ENSPSIG00000004262	SNAI3	90	57.642	ENSMEUG00000009510	SNAI2	86	57.642	Notamacropus_eugenii
ENSPSIG00000004262	SNAI3	58	80.272	ENSOANG00000007267	SNAI2	67	67.956	Ornithorhynchus_anatinus
ENSPSIG00000004262	SNAI3	91	59.565	ENSOGAG00000000419	SNAI3	77	61.304	Otolemur_garnettii
ENSPSIG00000004262	SNAI3	56	81.690	ENSOARG00000013030	SNAI2	53	81.690	Ovis_aries
ENSPSIG00000004262	SNAI3	90	42.672	ENSOARG00000013069	-	83	42.672	Ovis_aries
ENSPSIG00000004262	SNAI3	91	64.935	ENSPPAG00000043301	SNAI3	77	64.935	Pan_paniscus
ENSPSIG00000004262	SNAI3	56	80.986	ENSPPAG00000015662	SNAI2	73	62.626	Pan_paniscus
ENSPSIG00000004262	SNAI3	90	57.391	ENSPPRG00000008511	SNAI3	74	57.391	Panthera_pardus
ENSPSIG00000004262	SNAI3	56	80.986	ENSPPRG00000012562	-	86	57.447	Panthera_pardus
ENSPSIG00000004262	SNAI3	56	80.986	ENSPTRG00000020235	SNAI2	73	62.626	Pan_troglodytes
ENSPSIG00000004262	SNAI3	91	64.069	ENSPTRG00000008460	SNAI3	77	64.069	Pan_troglodytes
ENSPSIG00000004262	SNAI3	56	80.986	ENSPANG00000017540	SNAI2	73	62.626	Papio_anubis
ENSPSIG00000004262	SNAI3	91	63.478	ENSPANG00000000509	SNAI3	77	63.478	Papio_anubis
ENSPSIG00000004262	SNAI3	56	80.986	ENSPKIG00000002254	SNAI2	74	67.204	Paramormyrops_kingsleyae
ENSPSIG00000004262	SNAI3	58	77.027	ENSPKIG00000007872	SNAI3	51	77.027	Paramormyrops_kingsleyae
ENSPSIG00000004262	SNAI3	65	73.780	ENSPMGG00000013179	SNAI2	63	73.780	Periophthalmus_magnuspinnatus
ENSPSIG00000004262	SNAI3	58	80.272	ENSPEMG00000011739	Snai2	86	58.723	Peromyscus_maniculatus_bairdii
ENSPSIG00000004262	SNAI3	92	57.872	ENSPCIG00000025156	SNAI2	86	57.872	Phascolarctos_cinereus
ENSPSIG00000004262	SNAI3	65	71.687	ENSPREG00000008528	SNAI2	61	71.687	Poecilia_reticulata
ENSPSIG00000004262	SNAI3	91	64.502	ENSPPYG00000007643	SNAI3	77	64.502	Pongo_abelii
ENSPSIG00000004262	SNAI3	56	80.986	ENSPPYG00000018578	SNAI2	73	62.626	Pongo_abelii
ENSPSIG00000004262	SNAI3	56	80.986	ENSPCOG00000015656	SNAI2	86	57.447	Propithecus_coquereli
ENSPSIG00000004262	SNAI3	56	80.986	ENSPVAG00000009457	SNAI2	86	57.447	Pteropus_vampyrus
ENSPSIG00000004262	SNAI3	89	60.000	ENSRNOG00000013586	Snai3	75	60.000	Rattus_norvegicus
ENSPSIG00000004262	SNAI3	91	63.478	ENSRBIG00000025770	SNAI3	77	63.478	Rhinopithecus_bieti
ENSPSIG00000004262	SNAI3	56	80.986	ENSRBIG00000041133	SNAI2	73	62.626	Rhinopithecus_bieti
ENSPSIG00000004262	SNAI3	56	80.986	ENSRROG00000032273	SNAI2	73	62.626	Rhinopithecus_roxellana
ENSPSIG00000004262	SNAI3	91	63.043	ENSRROG00000032757	SNAI3	77	63.043	Rhinopithecus_roxellana
ENSPSIG00000004262	SNAI3	56	80.986	ENSSBOG00000035774	SNAI2	73	62.626	Saimiri_boliviensis_boliviensis
ENSPSIG00000004262	SNAI3	92	57.872	ENSSHAG00000004205	SNAI2	86	57.872	Sarcophilus_harrisii
ENSPSIG00000004262	SNAI3	72	69.231	ENSSFOG00015018025	SNAI2	67	69.231	Scleropages_formosus
ENSPSIG00000004262	SNAI3	56	80.986	ENSSPUG00000005427	-	75	61.951	Sphenodon_punctatus
ENSPSIG00000004262	SNAI3	56	80.986	ENSSSCG00000039568	SNAI2	53	80.986	Sus_scrofa
ENSPSIG00000004262	SNAI3	90	57.826	ENSTTRG00000006262	SNAI3	76	57.826	Tursiops_truncatus
ENSPSIG00000004262	SNAI3	91	64.069	ENSUAMG00000020030	SNAI3	77	64.069	Ursus_americanus
ENSPSIG00000004262	SNAI3	56	80.986	ENSUAMG00000014942	SNAI2	62	80.986	Ursus_americanus
ENSPSIG00000004262	SNAI3	56	80.986	ENSUMAG00000006525	SNAI2	87	57.447	Ursus_maritimus
ENSPSIG00000004262	SNAI3	56	80.986	ENSVVUG00000017625	SNAI2	75	61.951	Vulpes_vulpes
ENSPSIG00000004262	SNAI3	91	64.192	ENSVVUG00000003233	SNAI3	77	64.192	Vulpes_vulpes
ENSPSIG00000004262	SNAI3	56	80.282	ENSXETG00000024006	snai2	53	80.282	Xenopus_tropicalis