EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000004397 (Gene tree)
Gene ID: 102463199
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 7
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 12689 bases
Position: chrJH205677.1:242874-255562
Accession: 102463199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000004700	RRM_1	PF00076.22	1.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000004726	-	2623	XM_006139654	ENSPSIP00000004700	253 (aa)	-	K7F9J0

Gene Model

Click here to download ENSPSIG00000004397's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG
pss05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000004397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000004397	-	52	65.152	ENSCAFG00020013547	-	75	66.667	Canis_lupus_dingo
ENSPSIG00000004397	-	50	74.016	ENSCSEG00000006378	srsf7a	81	75.652	Cynoglossus_semilaevis
ENSPSIG00000004397	-	85	64.651	ENSDARG00000035325	srsf7a	85	82.500	Danio_rerio
ENSPSIG00000004397	-	60	50.920	ENSEBUG00000002677	-	55	65.882	Eptatretus_burgeri
ENSPSIG00000004397	-	88	76.126	ENSELUG00000018155	srsf7b	80	88.288	Esox_lucius
ENSPSIG00000004397	-	52	63.158	ENSFCAG00000028644	-	73	61.818	Felis_catus
ENSPSIG00000004397	-	70	61.364	ENSFHEG00000007159	srsf7a	60	78.571	Fundulus_heteroclitus
ENSPSIG00000004397	-	55	66.901	ENSJJAG00000020230	-	71	70.000	Jaculus_jaculus
ENSPSIG00000004397	-	63	47.853	ENSMAUG00000011430	-	61	56.989	Mesocricetus_auratus
ENSPSIG00000004397	-	50	85.827	ENSMOCG00000022763	-	51	88.235	Microtus_ochrogaster
ENSPSIG00000004397	-	59	45.333	ENSMMOG00000021774	srsf3b	74	48.667	Mola_mola
ENSPSIG00000004397	-	58	84.247	ENSPKIG00000017425	srsf7b	68	90.756	Paramormyrops_kingsleyae
ENSPSIG00000004397	-	66	48.503	ENSPMGG00000004040	srsf3b	76	69.474	Periophthalmus_magnuspinnatus
ENSPSIG00000004397	-	51	70.312	ENSPMGG00000021890	srsf7a	78	77.982	Periophthalmus_magnuspinnatus
ENSPSIG00000004397	-	91	71.429	ENSSDUG00000021338	srsf7b	83	86.555	Seriola_dumerili
ENSPSIG00000004397	-	69	70.857	ENSSLDG00000021463	srsf7b	67	87.395	Seriola_lalandi_dorsalis
ENSPSIG00000004397	-	69	64.368	ENSUMAG00000023107	-	61	81.356	Ursus_maritimus
ENSPSIG00000004397	-	61	58.974	ENSVVUG00000006092	-	69	73.611	Vulpes_vulpes